Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY16482 | Canola | nucleus | 92.89 | 95.0 |
| CDY29358 | Canola | nucleus | 59.11 | 52.67 |
| CDY04335 | Canola | nucleus | 56.44 | 48.11 |
| AT1G49190.2 | Thale cress | nucleus | 52.67 | 38.1 |
| CDY54630 | Canola | cytosol | 12.67 | 36.77 |
| CDY54632 | Canola | cytosol | 12.0 | 36.49 |
| CDY52720 | Canola | nucleus | 15.11 | 36.36 |
| CDX82391 | Canola | cytosol | 11.78 | 35.81 |
| CDX76652 | Canola | nucleus | 32.67 | 35.08 |
| CDY11437 | Canola | nucleus | 31.78 | 34.05 |
| VIT_11s0052g01160.t01 | Wine grape | cytosol | 15.11 | 31.48 |
| CDX73905 | Canola | nucleus | 6.67 | 30.0 |
| CDX73907 | Canola | nucleus | 8.67 | 28.89 |
| CDY56439 | Canola | nucleus | 15.78 | 25.82 |
| CDX86245 | Canola | nucleus | 15.56 | 25.64 |
| Zm00001d032784_P001 | Maize | nucleus | 18.89 | 25.22 |
| KXG38401 | Sorghum | nucleus | 19.11 | 24.78 |
| CDX87845 | Canola | cytosol, extracellular | 7.33 | 24.63 |
| CDY64566 | Canola | nucleus | 19.78 | 23.67 |
| CDY09419 | Canola | nucleus | 19.78 | 23.61 |
| GSMUA_Achr5P13050_001 | Banana | cytosol | 12.0 | 23.58 |
| CDX75892 | Canola | nucleus | 22.89 | 22.79 |
| CDX95898 | Canola | nucleus | 23.78 | 21.19 |
| CDX92102 | Canola | nucleus | 23.56 | 21.12 |
| CDY68249 | Canola | nucleus | 19.56 | 20.14 |
| VIT_07s0005g01010.t01 | Wine grape | nucleus | 23.33 | 19.66 |
| CDY28869 | Canola | nucleus | 22.0 | 19.53 |
| CDY05641 | Canola | nucleus | 19.33 | 19.51 |
| CDY07410 | Canola | nucleus | 22.0 | 19.45 |
| CDY33920 | Canola | nucleus | 18.44 | 19.17 |
| CDY01838 | Canola | nucleus | 20.89 | 18.8 |
| CDX96070 | Canola | nucleus | 21.11 | 18.52 |
| CDY02794 | Canola | nucleus | 19.56 | 18.45 |
| CDX68803 | Canola | nucleus | 20.89 | 18.4 |
| CDY13465 | Canola | nucleus | 21.11 | 18.34 |
| Os10t0463400-01 | Rice | nucleus | 13.78 | 18.18 |
| CDX72337 | Canola | nucleus | 21.11 | 18.16 |
| CDX90546 | Canola | nucleus | 23.33 | 17.8 |
| Solyc12g099380.1.1 | Tomato | nucleus | 21.78 | 17.66 |
| PGSC0003DMT400090747 | Potato | nucleus | 21.78 | 17.53 |
| CDX82389 | Canola | nucleus | 23.56 | 17.41 |
| CDY09718 | Canola | nucleus | 23.11 | 17.3 |
| CDX68392 | Canola | nucleus | 10.0 | 17.18 |
| CDY70103 | Canola | nucleus | 21.56 | 16.81 |
| CDY35371 | Canola | nucleus | 21.56 | 16.7 |
| CDX82988 | Canola | nucleus | 9.56 | 16.6 |
| CDX79963 | Canola | nucleus | 8.44 | 15.38 |
| CDY61256 | Canola | nucleus | 9.33 | 15.33 |
| CDY53674 | Canola | nucleus | 8.44 | 15.32 |
| CDY52133 | Canola | nucleus | 8.44 | 15.2 |
| CDX80940 | Canola | nucleus | 8.22 | 15.16 |
| CDY02793 | Canola | nucleus | 20.67 | 14.86 |
| CDY49965 | Canola | mitochondrion | 11.11 | 14.84 |
| CDX99104 | Canola | nucleus | 9.56 | 14.83 |
| CDY32725 | Canola | nucleus | 20.44 | 14.77 |
| CDY08579 | Canola | nucleus | 7.78 | 14.46 |
| CDY67763 | Canola | nucleus | 18.89 | 14.31 |
| CDX98997 | Canola | nucleus | 18.89 | 14.19 |
| CDX70016 | Canola | nucleus | 18.67 | 14.0 |
| CDY36273 | Canola | mitochondrion | 7.33 | 13.81 |
| CDX98816 | Canola | nucleus | 8.0 | 13.79 |
| CDX81041 | Canola | nucleus | 17.33 | 13.78 |
| CDX78284 | Canola | nucleus | 17.11 | 13.56 |
| CDY00969 | Canola | nucleus | 8.22 | 13.03 |
| CDY32209 | Canola | nucleus | 13.56 | 12.92 |
| CDY34423 | Canola | nucleus | 13.33 | 12.63 |
| CDY14053 | Canola | nucleus | 18.0 | 10.83 |
| CDX86925 | Canola | nucleus | 14.22 | 9.45 |
| CDY30695 | Canola | nucleus | 12.0 | 7.17 |
| TraesCS7A01G539600.1 | Wheat | nucleus | 4.0 | 5.33 |
| TraesCSU01G179800.1 | Wheat | nucleus, plastid | 1.11 | 1.51 |
| TraesCSU01G196300.1 | Wheat | nucleus, plastid | 1.11 | 1.51 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:11.4.2.4 | MapMan:15.5.23 | Gene3D:3.40.50.2300 | GO:A0A078CQA4 | EnsemblPlants:CDX77263 |
| ProteinID:CDX77263 | ProteinID:CDX77263.1 | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 |
| EnsemblPlantsGene:GSBRNA2T00127966001 | InterPro:Homeobox-like_sf | InterPro:IPR001789 | InterPro:Myb_dom_plants | PFAM:PF00072 | PFscan:PS50110 |
| PANTHER:PTHR43874 | PANTHER:PTHR43874:SF23 | SMART:SM00448 | SUPFAM:SSF46689 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver |
| TIGRFAMs:TIGR01557 | UniParc:UPI0004EE65A2 | SEG:seg | : | : | : |
Description
BnaC08g03080D
Coordinates
chrLK031810:-:499803..501539
Molecular Weight (calculated)
51205.9 Da
IEP (calculated)
5.435
GRAVY (calculated)
-0.601
Length
450 amino acids
Sequence
(BLAST)
(BLAST)
001: MSIGHITEDG DKALFLQQET SEINSPLIEF PPSTNVLVVD SNLSTLLDMK EIMERCAYHV TAYADAEEAI AFLTKCKHEI NIVIWDYHMP GINGLQALAI
101: IGSKMDLPVV IMSGDDQTES VMNAMVHGAC HYVMKPVRKE IIATIWQHIV RKRMMSKPGL VPPVVVHDDC SKQERDDSVT VDQDDSEQSI DKIEEKATKK
201: RTMICIEETQ PMQSHLVKSN GSDQDDDDSR SVSNYNNEQK IDKKKESYFK RPRMSWTGDL QQKFLEAIDI VGGPKKASPK VLLKCLHDMK IEGLTRNNVS
301: SHLQKYRLSL EENKIPQQFP ETGWSSLSRP SPFLGMNNGF IAPTSLRNGP AVYPVQDNQY QNGYLAMNNN QLVTNNMPGF PYLDNDHHLQ QQHQQRQYQL
401: SNQVMNCMMR KNEPQQAYNG IGLTDLEPNI YPSLPYDPNE FLFDGYNFSN
101: IGSKMDLPVV IMSGDDQTES VMNAMVHGAC HYVMKPVRKE IIATIWQHIV RKRMMSKPGL VPPVVVHDDC SKQERDDSVT VDQDDSEQSI DKIEEKATKK
201: RTMICIEETQ PMQSHLVKSN GSDQDDDDSR SVSNYNNEQK IDKKKESYFK RPRMSWTGDL QQKFLEAIDI VGGPKKASPK VLLKCLHDMK IEGLTRNNVS
301: SHLQKYRLSL EENKIPQQFP ETGWSSLSRP SPFLGMNNGF IAPTSLRNGP AVYPVQDNQY QNGYLAMNNN QLVTNNMPGF PYLDNDHHLQ QQHQQRQYQL
401: SNQVMNCMMR KNEPQQAYNG IGLTDLEPNI YPSLPYDPNE FLFDGYNFSN
001: MLVGKISGYE DNTRSLERET SEITSLLSQF PGNTNVLVVD TNFTTLLNMK QIMKQYAYQV SIETDAEKAL AFLTSCKHEI NIVIWDFHMP GIDGLQALKS
101: ITSKLDLPVV IMSDDNQTES VMKATFYGAC DYVVKPVKEE VMANIWQHIV RKRLIFKPDV APPKPRMTWS EVFQPVQSHL VPTDGLDRDH FDSITINGGN
201: GIQNMEKKQG KKPRKPRMTW TEELHQKFLE AIEIIGGIEK ANPKVLVECL QEMRIEGITR SNVASHLQKH RINLEENQIP QQTQGNGWAT AYGTLAPSLQ
301: GSDNVNTTIP SYLMNGPATL NQIQQNQYQN GFLTMNNNQI ITNPPPPLPY LDHHHQQQHQ SSPQFNYLMN NEELLQASGL SATDLELTYP SLPYDPQEYL
401: INGYNYN
101: ITSKLDLPVV IMSDDNQTES VMKATFYGAC DYVVKPVKEE VMANIWQHIV RKRLIFKPDV APPKPRMTWS EVFQPVQSHL VPTDGLDRDH FDSITINGGN
201: GIQNMEKKQG KKPRKPRMTW TEELHQKFLE AIEIIGGIEK ANPKVLVECL QEMRIEGITR SNVASHLQKH RINLEENQIP QQTQGNGWAT AYGTLAPSLQ
301: GSDNVNTTIP SYLMNGPATL NQIQQNQYQN GFLTMNNNQI ITNPPPPLPY LDHHHQQQHQ SSPQFNYLMN NEELLQASGL SATDLELTYP SLPYDPQEYL
401: INGYNYN
Arabidopsis Description
RR19response regulator 19 [Source:TAIR;Acc:AT1G49190]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.