Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30695 | Canola | nucleus | 51.11 | 45.95 |
| CDY52720 | Canola | nucleus | 7.53 | 27.27 |
| CDX73905 | Canola | nucleus | 3.84 | 26.0 |
| CDX73907 | Canola | nucleus | 4.58 | 22.96 |
| Solyc07g019550.1.1 | Tomato | nucleus | 11.52 | 21.25 |
| CDX81041 | Canola | nucleus | 17.13 | 20.49 |
| PGSC0003DMT400035788 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 6.5 | 20.28 |
| CDX78284 | Canola | nucleus | 16.99 | 20.25 |
| CDX98997 | Canola | nucleus | 17.73 | 20.03 |
| Solyc11g072330.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 9.75 | 20.0 |
| CDX86245 | Canola | nucleus | 7.98 | 19.78 |
| CDX70016 | Canola | nucleus | 17.43 | 19.67 |
| CDY56439 | Canola | nucleus | 7.98 | 19.64 |
| CDY54630 | Canola | cytosol | 4.43 | 19.35 |
| Solyc03g026250.1.1 | Tomato | nucleus | 9.45 | 19.22 |
| CDY67763 | Canola | nucleus | 16.4 | 18.69 |
| CDY54632 | Canola | cytosol | 3.84 | 17.57 |
| CDX82391 | Canola | cytosol | 3.84 | 17.57 |
| CDY64566 | Canola | nucleus | 9.45 | 17.02 |
| CDY09419 | Canola | nucleus | 9.31 | 16.71 |
| CDY14053 | Canola | nucleus | 18.17 | 16.44 |
| CDY13465 | Canola | nucleus | 12.41 | 16.22 |
| CDY33920 | Canola | nucleus | 10.34 | 16.17 |
| CDX76652 | Canola | nucleus | 9.9 | 15.99 |
| CDX80940 | Canola | nucleus | 5.76 | 15.98 |
| CDX75892 | Canola | nucleus | 10.64 | 15.93 |
| CDX72337 | Canola | nucleus | 12.26 | 15.87 |
| CDY11437 | Canola | nucleus | 9.75 | 15.71 |
| CDY05641 | Canola | nucleus | 10.34 | 15.7 |
| CDX95898 | Canola | nucleus | 11.52 | 15.45 |
| CDX92102 | Canola | nucleus | 11.37 | 15.34 |
| CDY61256 | Canola | nucleus | 6.2 | 15.33 |
| CDY09718 | Canola | nucleus | 13.59 | 15.31 |
| CDX68392 | Canola | nucleus | 5.91 | 15.27 |
| CDY16482 | Canola | nucleus | 9.9 | 15.23 |
| CDY52133 | Canola | nucleus | 5.61 | 15.2 |
| CDX90546 | Canola | nucleus | 13.15 | 15.08 |
| CDX87845 | Canola | cytosol, extracellular | 2.95 | 14.93 |
| CDY02794 | Canola | nucleus | 10.49 | 14.88 |
| CDX68803 | Canola | nucleus | 11.08 | 14.68 |
| KRH09142 | Soybean | nucleus | 14.48 | 14.65 |
| CDY68249 | Canola | nucleus | 9.45 | 14.65 |
| VIT_16s0100g00420.t01 | Wine grape | nucleus | 12.7 | 14.53 |
| CDX99104 | Canola | nucleus | 6.2 | 14.48 |
| CDX82389 | Canola | nucleus | 12.85 | 14.29 |
| CDX82988 | Canola | nucleus | 5.47 | 14.29 |
| CDX77263 | Canola | nucleus | 9.45 | 14.22 |
| CDY70103 | Canola | nucleus | 12.11 | 14.21 |
| CDX98816 | Canola | nucleus | 5.47 | 14.18 |
| CDY08579 | Canola | nucleus | 5.02 | 14.05 |
| CDY35371 | Canola | nucleus | 11.96 | 13.94 |
| CDX96070 | Canola | nucleus | 10.49 | 13.84 |
| CDY28869 | Canola | nucleus | 10.34 | 13.81 |
| CDX79963 | Canola | nucleus | 5.02 | 13.77 |
| CDY07410 | Canola | nucleus | 10.34 | 13.75 |
| CDY53674 | Canola | nucleus | 5.02 | 13.71 |
| VIT_16s0100g00430.t01 | Wine grape | nucleus | 10.04 | 13.68 |
| CDY29358 | Canola | nucleus | 10.19 | 13.66 |
| CDY01838 | Canola | nucleus | 10.04 | 13.6 |
| CDY00969 | Canola | nucleus | 5.47 | 13.03 |
| CDY32209 | Canola | nucleus | 9.01 | 12.92 |
| KRH38615 | Soybean | nucleus | 10.04 | 12.88 |
| CDY04335 | Canola | nucleus | 9.75 | 12.5 |
| CDY34423 | Canola | nucleus | 8.71 | 12.42 |
| CDY32725 | Canola | nucleus | 11.37 | 12.36 |
| CDY02793 | Canola | nucleus | 11.37 | 12.3 |
| CDY36273 | Canola | mitochondrion | 4.14 | 11.72 |
| CDY49965 | Canola | mitochondrion | 3.1 | 6.23 |
Protein Annotations
| Gene3D:1.10.10.60 | Gene3D:3.40.50.2300 | MapMan:35.1 | GO:A0A078DCG8 | EnsemblPlants:CDX86925 | ProteinID:CDX86925 |
| ProteinID:CDX86925.1 | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00145729001 |
| InterPro:Homeobox-like_sf | InterPro:IPR001789 | InterPro:Myb_dom_plants | PFAM:PF00072 | PFscan:PS50110 | PANTHER:PTHR43874 |
| PANTHER:PTHR43874:SF19 | SUPFAM:SSF46689 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | TIGRFAMs:TIGR01557 | UniParc:UPI0004EF23DD |
| SEG:seg | : | : | : | : | : |
Description
BnaC03g51950D
Coordinates
chrLK031848:+:461628..465571
Molecular Weight (calculated)
74121.5 Da
IEP (calculated)
8.357
GRAVY (calculated)
-0.713
Length
677 amino acids
Sequence
(BLAST)
(BLAST)
001: MKANDSSEAL STLRGHCNNI DVVITEYHMP NLNGVQLQRR INEEFGNMPV IVISSDMNNE IEQETLSSGA MCFMRKPIKP NDIDTIYKHA LDYKINGGSK
101: EIQKTNSTSN PEDGSSGAKA TKKFKIIWTS SLENHFCKAI QHIGVHKVTP TKILKFMNLN YLTRAHIASK LQKYRKFLKK VKGESVEKTR RVMISNIQSS
201: SYINPQRSYN YKTSLGNNNI FNSQRGYGLG QSSHTMNNNA GFHGSVHCMN RTPTYNSQTG SKFLPRRGSL GVSSGMFALK EEMGSMSGTS QEYQAHKFGQ
301: YGTTSGALGM KSNLNTGTTG SNYAGHRIDE KGDVFGPGGI RVNVNENASL GRMRVTGNGN GSLGGIRIHA TGNGCFGGTR VQGNSNGFLG EIKVHGIGNG
401: SLGGTEVRGN DNGFLNERRV RGTGNGSLGG TRIQGNDNGF LDEIRVHGNH NGSFGEIRVH GNDSFGGLRV NSTDNGNGCL DGVMIHGNIN ANGSLGGMRV
501: HTGNGNASLD ENLSSMNWNF NNNNMSNHGS STSRFPSALS SFFDNKDQSQ NYLNAQTGGV VPVLQNPRRP NNHHGINDFF RDTVNSQFDH NQQQGKVTGE
601: NPEVPPAYPL ENLSNGNYNE ETLNSVANSE MYFPTDQNMI ITNKEYGVED LMELPLSFDQ DYEDENLLKF LLEHDMN
101: EIQKTNSTSN PEDGSSGAKA TKKFKIIWTS SLENHFCKAI QHIGVHKVTP TKILKFMNLN YLTRAHIASK LQKYRKFLKK VKGESVEKTR RVMISNIQSS
201: SYINPQRSYN YKTSLGNNNI FNSQRGYGLG QSSHTMNNNA GFHGSVHCMN RTPTYNSQTG SKFLPRRGSL GVSSGMFALK EEMGSMSGTS QEYQAHKFGQ
301: YGTTSGALGM KSNLNTGTTG SNYAGHRIDE KGDVFGPGGI RVNVNENASL GRMRVTGNGN GSLGGIRIHA TGNGCFGGTR VQGNSNGFLG EIKVHGIGNG
401: SLGGTEVRGN DNGFLNERRV RGTGNGSLGG TRIQGNDNGF LDEIRVHGNH NGSFGEIRVH GNDSFGGLRV NSTDNGNGCL DGVMIHGNIN ANGSLGGMRV
501: HTGNGNASLD ENLSSMNWNF NNNNMSNHGS STSRFPSALS SFFDNKDQSQ NYLNAQTGGV VPVLQNPRRP NNHHGINDFF RDTVNSQFDH NQQQGKVTGE
601: NPEVPPAYPL ENLSNGNYNE ETLNSVANSE MYFPTDQNMI ITNKEYGVED LMELPLSFDQ DYEDENLLKF LLEHDMN
001: MTAKDSSEPV TTLTQFNNID VVITDYHMPG LNGVQLKKRI DEEFGNLPVI DLYRNIEHEE LFRRALCFMH KPISRRDLNS LNVVCQQALR HRMNGETNLN
101: GSGQNVTDDP DDWLRLREKP KLKWTKPLQH RFMSALKSLG VASKY
101: GSGQNVTDDP DDWLRLREKP KLKWTKPLQH RFMSALKSLG VASKY
Arabidopsis Description
ARR23Response regulator 23 [Source:UniProtKB/TrEMBL;Acc:F4K554]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.