Factsheet for Solyc11g072330.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, plastid, cytosol, plasma membrane, golgi, nucleus

Predictor Summary:

nucleus 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid, secretory
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g026250.1.1	Tomato	nucleus	26.97	26.73
Solyc07g019550.1.1	Tomato	nucleus	23.03	20.71
Solyc06g005680.2.1	Tomato	nucleus	14.85	18.42
AT2G27070.1	Thale cress	nucleus	27.58	15.91
CDY67763	Canola	nucleus	28.48	15.82
Solyc10g080960.1.1	Tomato	nucleus	12.73	15.79
VIT_16s0100g00420.t01	Wine grape	nucleus	27.88	15.54
CDX98997	Canola	nucleus	28.18	15.53
CDX70016	Canola	nucleus	28.18	15.5
Solyc05g014260.2.1	Tomato	nucleus	26.67	15.15
AT5G07210.1	Thale cress	nucleus	28.48	15.14
CDX78284	Canola	nucleus	25.76	14.96
Solyc12g099380.1.1	Tomato	nucleus	25.15	14.96
CDX81041	Canola	nucleus	25.45	14.84
Solyc10g078310.1.1	Tomato	nucleus	13.03	14.83
Solyc01g091810.1.1	Tomato	nucleus	25.45	14.53
VIT_16s0100g00430.t01	Wine grape	nucleus	21.52	14.29
Solyc01g065540.2.1	Tomato	nucleus	28.79	14.03
Solyc05g054390.2.1	Tomato	nucleus	28.18	14.03
Solyc12g010330.1.1	Tomato	nucleus	29.7	13.84
Solyc07g005140.2.1	Tomato	nucleus	27.58	13.68
Solyc04g008050.2.1	Tomato	nucleus	26.67	13.46
Solyc06g076350.2.1	Tomato	nucleus	13.03	13.35
Bra005928.1-P	Field mustard	nucleus	29.39	12.78
KRH09142	Soybean	nucleus	25.76	12.71
Bra028705.1-P	Field mustard	nucleus	28.79	12.39
Bra009284.1-P	Field mustard	nucleus	28.48	12.16
KRH38615	Soybean	nucleus	19.39	12.12
CDY14053	Canola	nucleus	26.97	11.9
CDX86925	Canola	nucleus	20.0	9.75
CDY30695	Canola	nucleus	15.45	6.77

Protein Annotations

Gene3D:1.10.10.60	Gene3D:3.40.50.2300	MapMan:35.1	InterPro:CheY-like_superfamily	GO:GO:0000160	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf
InterPro:IPR001789	UniProt:K4DAU0	InterPro:Myb_dom_plants	PFAM:PF00072	PFAM:PF00249	PFscan:PS50110
PANTHER:PTHR31442	PANTHER:PTHR31442:SF10	InterPro:SANT/Myb	SUPFAM:SSF46689	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver
EnsemblPlantsGene:Solyc11g072330.1	EnsemblPlants:Solyc11g072330.1.1	TIGRFAMs:TIGR01557	UniParc:UPI0002769B24	:	:

Description

No Description!

Coordinates

chr11:+:55539229..55545060

Molecular Weight (calculated)

36484.9 Da

IEP (calculated)

9.286

GRAVY (calculated)

-0.427

Length

330 amino acids

Sequence
(BLAST)

001: MSSKTAQKIS ILVVDDNAAY LQVVAELLKK CNYQAVAVKY PIDALPKLQI KVDSCDLIVI DVHKSDMNGC KLQEMIAEAF EIPVLSMSAD QKEGAILKGL
101: KGLSVDDQRD KGLCTVLQEK KGKRAVPGKS AMKQRKRGKD NSGDLVLPTK PQIIWTDSLH HAFLEAIHDI GFSKAVPKKI HEHMNVPGLT RENVSSHWQK
201: YRNYLHRVID SSSINKVPDK NLASRANQST IASGMLVKHR QVHQENFGVQ SSVPSSLIHP STGYLTGNLQ HLKNKGKEVD VVLDPVRNFS VFHKVSAMQG
301: LQGIGDLSAS SMNQGNDQPH QDMETEDNLQ

Best Arabidopsis Sequence Match ( AT5G07210.2 )
(BLAST)

001: MASAQSFYNQ SSVLKINVMV VDDDHVFLDI MSRMLQHSKY RVIAVDDPKK ALSTLKIQRD NIDLIITDYY MPGMNGLQLK KQITQEFGNL PVLVMSSDTN
101: KEEESLSCGA MGFIPKPIHP TDLTKIYQFA LSNKRNGKST LSTEQNHKDA DVSVPQQITL VPEQADVLKT KRKNCSFKSD SRTVNSTNGS CVSTDGSRKN
201: RKRKPNGGPS DDGESMSQPA KKKKIQWTDS LHDLFLQAIR HIGLDKAVPK KILAFMSVPY LTRENVASHL QKYRIFLRRV AEQGLYSMLS DRGIDSMFRQ
301: THIKEPYFNY YTPSTSWYDT RLNNRSFYSK PVHGFGQSKL LSTTREPVCF NQMPYNYMNR SSTYEPHRIG SGSNLTLPIQ SNLSFPNQPS QNEERRSFFE
401: PPVMANKIAQ TSQVLGFGQL GPSAISGHNF NNNMTSRYGS LIPSQPGPSH FSYGMQSFLN NENVTYNPQP PANATTQPNL DELPQLENLN LYNDFGNTSE
501: LPYNISNFQF DDNKHQQGEA DPTKFELPAA KFSTELNHED DGDWTFVNIN QGQSNGETSN TIASPETNTP ILNINHNQNQ GQDVPEFNDW SFLDPQELVD
601: DDFMNSLFNN DMN

Arabidopsis Description

ARR21response regulator 21 [Source:TAIR;Acc:AT5G07210]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.