Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67763 | Canola | nucleus | 70.59 | 88.89 |
| CDX98997 | Canola | nucleus | 50.53 | 63.11 |
| CDX70016 | Canola | nucleus | 50.27 | 62.67 |
| CDX81041 | Canola | nucleus | 47.19 | 62.37 |
| CDX78284 | Canola | nucleus | 46.79 | 61.62 |
| AT5G07210.1 | Thale cress | nucleus | 50.27 | 60.55 |
| AT2G27070.1 | Thale cress | nucleus | 44.25 | 57.87 |
| CDX73905 | Canola | nucleus | 5.48 | 41.0 |
| CDY52720 | Canola | nucleus | 7.89 | 31.55 |
| CDX73907 | Canola | nucleus | 5.48 | 30.37 |
| CDY54630 | Canola | cytosol | 6.15 | 29.68 |
| CDX82391 | Canola | cytosol | 5.61 | 28.38 |
| CDY54632 | Canola | cytosol | 5.61 | 28.38 |
| Solyc11g072330.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 11.9 | 26.97 |
| PGSC0003DMT400035788 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 7.75 | 26.73 |
| CDY64566 | Canola | nucleus | 12.83 | 25.53 |
| CDY09419 | Canola | nucleus | 12.83 | 25.46 |
| CDY56439 | Canola | nucleus | 9.22 | 25.09 |
| CDX86245 | Canola | nucleus | 9.09 | 24.91 |
| Solyc03g026250.1.1 | Tomato | nucleus | 10.7 | 24.02 |
| CDY68249 | Canola | nucleus | 13.1 | 22.43 |
| Solyc07g019550.1.1 | Tomato | nucleus | 10.96 | 22.34 |
| CDX75892 | Canola | nucleus | 13.24 | 21.9 |
| CDX95898 | Canola | nucleus | 14.17 | 20.99 |
| CDX68803 | Canola | nucleus | 14.04 | 20.55 |
| CDX92102 | Canola | nucleus | 13.77 | 20.52 |
| CDX80940 | Canola | nucleus | 6.68 | 20.49 |
| CDY13465 | Canola | nucleus | 14.04 | 20.27 |
| CDY52133 | Canola | nucleus | 6.68 | 20.0 |
| CDX72337 | Canola | nucleus | 13.9 | 19.89 |
| CDY08579 | Canola | nucleus | 6.42 | 19.83 |
| CDX82988 | Canola | nucleus | 6.82 | 19.69 |
| CDX98816 | Canola | nucleus | 6.82 | 19.54 |
| CDX87845 | Canola | cytosol, extracellular | 3.48 | 19.4 |
| CDY33920 | Canola | nucleus | 11.1 | 19.17 |
| CDY00969 | Canola | nucleus | 7.22 | 19.01 |
| CDY61256 | Canola | nucleus | 6.95 | 18.98 |
| CDY02794 | Canola | nucleus | 12.03 | 18.87 |
| CDY36273 | Canola | mitochondrion | 6.02 | 18.83 |
| CDX90546 | Canola | nucleus | 14.84 | 18.81 |
| CDX82389 | Canola | nucleus | 15.24 | 18.72 |
| CDY09718 | Canola | nucleus | 14.97 | 18.64 |
| CDY16482 | Canola | nucleus | 10.83 | 18.41 |
| KRH09142 | Soybean | nucleus | 16.44 | 18.39 |
| CDY05641 | Canola | nucleus | 10.96 | 18.39 |
| CDX68392 | Canola | nucleus | 6.42 | 18.32 |
| CDX99104 | Canola | nucleus | 7.09 | 18.28 |
| CDX86925 | Canola | nucleus | 16.44 | 18.17 |
| CDX76652 | Canola | nucleus | 10.16 | 18.14 |
| CDY11437 | Canola | nucleus | 10.16 | 18.1 |
| CDX77263 | Canola | nucleus | 10.83 | 18.0 |
| CDY28869 | Canola | nucleus | 12.17 | 17.95 |
| CDX79963 | Canola | nucleus | 5.88 | 17.81 |
| CDY53674 | Canola | nucleus | 5.88 | 17.74 |
| CDY35371 | Canola | nucleus | 13.64 | 17.56 |
| CDY70103 | Canola | nucleus | 13.5 | 17.5 |
| CDY07410 | Canola | nucleus | 11.9 | 17.49 |
| CDX96070 | Canola | nucleus | 11.9 | 17.35 |
| CDY01838 | Canola | nucleus | 11.36 | 17.0 |
| CDY34423 | Canola | nucleus | 10.7 | 16.84 |
| VIT_16s0100g00420.t01 | Wine grape | nucleus | 13.1 | 16.55 |
| CDY32209 | Canola | nucleus | 10.29 | 16.31 |
| CDY02793 | Canola | nucleus | 13.64 | 16.29 |
| CDY32725 | Canola | nucleus | 13.5 | 16.21 |
| KRH38615 | Soybean | nucleus | 11.36 | 16.1 |
| CDY29358 | Canola | nucleus | 10.43 | 15.45 |
| VIT_16s0100g00430.t01 | Wine grape | nucleus | 10.16 | 15.29 |
| CDY04335 | Canola | nucleus | 10.56 | 14.96 |
| CDY30695 | Canola | nucleus | 13.5 | 13.41 |
| CDY49965 | Canola | mitochondrion | 4.95 | 10.98 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:11.4.2.4 | MapMan:15.5.23 | Gene3D:3.40.50.2300 | GO:A0A078FP07 | UniProt:A0A078FP07 |
| EnsemblPlants:CDY14053 | ProteinID:CDY14053 | ProteinID:CDY14053.1 | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00078582001 | InterPro:Homeobox-like_sf |
| InterPro:IPR001789 | InterPro:Myb_dom_plants | PFAM:PF00072 | PFscan:PS50110 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF19 |
| SMART:SM00448 | SUPFAM:SSF46689 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | TIGRFAMs:TIGR01557 | UniParc:UPI0004EEB515 |
| SEG:seg | : | : | : | : | : |
Description
BnaC02g01700DBnaC02g01700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FP07]
Coordinates
chrLK032040:-:193326..197896
Molecular Weight (calculated)
83029.2 Da
IEP (calculated)
6.947
GRAVY (calculated)
-0.672
Length
748 amino acids
Sequence
(BLAST)
(BLAST)
001: MTFAQSLNNQ SSVLRINIMV VDDDPVSREI MSRMLERSKY RDPSMEITVI AVRDAREALS TLKIQRNNID LIVTDYYMPG MNGLQLKQQI TRQFGNFPVI
101: VMSSDTNKEQ ESLACGSVCF LPKPIKPTDL PKIYQVAFTY KRKGKSISRT EHNHMDTNVS IPQQIQLLPE QANVSRTKKN KKFSSRSDSR SPSKKSKLSW
201: SDYLHDLFLQ AIHHIGLDKA VPKKILEFMD VSYLTRENVA SHLQKYRNFL RKVAESSGML HGRGMEPYHS NYTTSSSWYD TGLNNKSSYS KPRHGLGQSR
301: LLSNTCEPVR FNQMPYNHMN RLSTYEPHRT GSNLTMPIKS NLSFSTQPLQ NEGSRSFLEP TVTANKTGQT SQVLGLGQHG MSATNDNNFI NNMMRSYGRI
401: SIYASSTSNQ PGMNSHGSST PNQPGMSSYG SVSPNQLGMS SHGSLTPSQR GMSSYESLTS NQPGMSSHGS LTPTQPGMIS RGSLTPTQQG ISSYGILSPS
501: QLGLSTQPGM SNQGSLGPTQ RGMGMSNYGS LTSYQPALST HGSLFPNQPG ISSHISLPPT QQGMSSFGSL TTNHSGMSSY EILTPAQPGP SHISYGLLLD
601: NENTAYKPQP HASTTIQPDN LSLYDDLGNI NEIPFDLSNF DFDHDKQQEE AVSANKFEIP ANLETELNQT SSLEEDGDWT FLNINQGHFN EKTSNTFAAP
701: EMNDPTFNKN PNHAQEQDVP DFDWSLLDFV NLANENDFMD SMFTNDMN
101: VMSSDTNKEQ ESLACGSVCF LPKPIKPTDL PKIYQVAFTY KRKGKSISRT EHNHMDTNVS IPQQIQLLPE QANVSRTKKN KKFSSRSDSR SPSKKSKLSW
201: SDYLHDLFLQ AIHHIGLDKA VPKKILEFMD VSYLTRENVA SHLQKYRNFL RKVAESSGML HGRGMEPYHS NYTTSSSWYD TGLNNKSSYS KPRHGLGQSR
301: LLSNTCEPVR FNQMPYNHMN RLSTYEPHRT GSNLTMPIKS NLSFSTQPLQ NEGSRSFLEP TVTANKTGQT SQVLGLGQHG MSATNDNNFI NNMMRSYGRI
401: SIYASSTSNQ PGMNSHGSST PNQPGMSSYG SVSPNQLGMS SHGSLTPSQR GMSSYESLTS NQPGMSSHGS LTPTQPGMIS RGSLTPTQQG ISSYGILSPS
501: QLGLSTQPGM SNQGSLGPTQ RGMGMSNYGS LTSYQPALST HGSLFPNQPG ISSHISLPPT QQGMSSFGSL TTNHSGMSSY EILTPAQPGP SHISYGLLLD
601: NENTAYKPQP HASTTIQPDN LSLYDDLGNI NEIPFDLSNF DFDHDKQQEE AVSANKFEIP ANLETELNQT SSLEEDGDWT FLNINQGHFN EKTSNTFAAP
701: EMNDPTFNKN PNHAQEQDVP DFDWSLLDFV NLANENDFMD SMFTNDMN
001: MAFAQSVYNQ SSVLKINVMV VDDNRVFLDI WSRMLEKSKY REITVIAVDY PKKALSTLKN QRDNIDLIIT DYYMPGMNGL QLKKQITQEF GNLSVLVMSS
101: DPNKEEESLS CGAMGFIPKP IAPTDLPKIY QFALTYKRNG KSTLSTEQNQ KDANVSVPQQ IMLVPEQAYV LKTKKKNCSS KSDTRTVNST NVSHVSTNGS
201: RKNRKRKPKG GPSDDGESLS QPPKKKKIWW TNPLQDLFLQ AIQHIGYDKV VPKKILAIMN VPYLTRENVA SHLQKYRLFV KRVVHQGRFS MLSDRGKDSM
301: FRQTHIKEPY VNYYTPSTSW YETSLNNRSF YSESVHGHSR LLSEAREPVR YNQMSYNYMN RNISFENQPS QNEETRTVFE PPVMANKISQ TSQVLGFGQL
401: GPSAISGHNF NTNMMSSYGS LTPNQPGTSH FSYGMQSVLN NENATYNPQP PANATTQPNL DELPQLENLN LYNDLGNTSE LPYNISNFQS DDNKKQGEED
501: GDWTFVNINQ DQSNGESSNT IATPETNTPN FNINPNQNQG QAVPEFTDWS FLDQQELVDD DFMNSLFNND MN
101: DPNKEEESLS CGAMGFIPKP IAPTDLPKIY QFALTYKRNG KSTLSTEQNQ KDANVSVPQQ IMLVPEQAYV LKTKKKNCSS KSDTRTVNST NVSHVSTNGS
201: RKNRKRKPKG GPSDDGESLS QPPKKKKIWW TNPLQDLFLQ AIQHIGYDKV VPKKILAIMN VPYLTRENVA SHLQKYRLFV KRVVHQGRFS MLSDRGKDSM
301: FRQTHIKEPY VNYYTPSTSW YETSLNNRSF YSESVHGHSR LLSEAREPVR YNQMSYNYMN RNISFENQPS QNEETRTVFE PPVMANKISQ TSQVLGFGQL
401: GPSAISGHNF NTNMMSSYGS LTPNQPGTSH FSYGMQSVLN NENATYNPQP PANATTQPNL DELPQLENLN LYNDLGNTSE LPYNISNFQS DDNKKQGEED
501: GDWTFVNINQ DQSNGESSNT IATPETNTPN FNINPNQNQG QAVPEFTDWS FLDQQELVDD DFMNSLFNND MN
Arabidopsis Description
ARR13Putative two-component response regulator ARR13 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVD3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.