Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020652.1-P | Field mustard | nucleus | 99.54 | 97.73 |
| CDY05641 | Canola | nucleus | 93.3 | 90.58 |
| CDX86245 | Canola | nucleus | 37.88 | 60.07 |
| CDY56439 | Canola | nucleus | 37.88 | 59.64 |
| AT5G49240.1 | Thale cress | cytoskeleton, cytosol, nucleus | 35.1 | 52.05 |
| CDY52720 | Canola | nucleus | 17.32 | 40.11 |
| CDX73905 | Canola | nucleus | 9.24 | 40.0 |
| CDY54630 | Canola | cytosol | 12.7 | 35.48 |
| CDY54632 | Canola | cytosol | 11.78 | 34.46 |
| CDX82391 | Canola | cytosol | 11.55 | 33.78 |
| CDX73907 | Canola | nucleus | 9.01 | 28.89 |
| VIT_11s0052g01160.t01 | Wine grape | cytosol | 14.32 | 28.7 |
| CDY64566 | Canola | nucleus | 22.4 | 25.8 |
| CDY09419 | Canola | nucleus | 22.17 | 25.46 |
| Zm00001d032784_P001 | Maize | nucleus | 19.17 | 24.63 |
| GSMUA_Achr5P13050_001 | Banana | cytosol | 12.47 | 23.58 |
| KXG38401 | Sorghum | nucleus | 18.48 | 23.05 |
| CDX75892 | Canola | nucleus | 24.02 | 23.01 |
| CDX87845 | Canola | cytosol, extracellular | 6.93 | 22.39 |
| CDX92102 | Canola | nucleus | 25.87 | 22.31 |
| CDY68249 | Canola | nucleus | 22.4 | 22.2 |
| CDX95898 | Canola | nucleus | 25.87 | 22.18 |
| CDY28869 | Canola | nucleus | 24.02 | 20.51 |
| CDY01838 | Canola | nucleus | 23.56 | 20.4 |
| CDY07410 | Canola | nucleus | 23.79 | 20.24 |
| CDX96070 | Canola | nucleus | 23.79 | 20.08 |
| CDY13465 | Canola | nucleus | 23.79 | 19.88 |
| CDX68392 | Canola | nucleus | 12.01 | 19.85 |
| CDX90546 | Canola | nucleus | 27.02 | 19.83 |
| CDY09718 | Canola | nucleus | 27.48 | 19.8 |
| CDX72337 | Canola | nucleus | 23.79 | 19.69 |
| CDX79963 | Canola | nucleus | 11.09 | 19.43 |
| CDX68803 | Canola | nucleus | 22.86 | 19.37 |
| CDX82988 | Canola | nucleus | 11.55 | 19.3 |
| PGSC0003DMT400090747 | Potato | nucleus | 24.71 | 19.14 |
| CDY16482 | Canola | nucleus | 19.4 | 19.09 |
| CDY02794 | Canola | nucleus | 21.02 | 19.08 |
| CDY61256 | Canola | nucleus | 12.01 | 18.98 |
| CDY53674 | Canola | nucleus | 10.85 | 18.95 |
| CDY00969 | Canola | nucleus | 12.24 | 18.66 |
| CDX99104 | Canola | nucleus | 12.47 | 18.62 |
| CDY08579 | Canola | nucleus | 10.39 | 18.59 |
| CDY70103 | Canola | nucleus | 24.71 | 18.54 |
| CDX77263 | Canola | nucleus | 19.17 | 18.44 |
| CDY35371 | Canola | nucleus | 24.71 | 18.42 |
| Solyc12g099380.1.1 | Tomato | nucleus | 23.33 | 18.2 |
| Os10t0463400-01 | Rice | nucleus | 14.09 | 17.89 |
| CDY29358 | Canola | nucleus | 20.79 | 17.82 |
| CDX82389 | Canola | nucleus | 24.94 | 17.73 |
| CDX98816 | Canola | nucleus | 10.62 | 17.62 |
| CDX80940 | Canola | nucleus | 9.93 | 17.62 |
| CDY04335 | Canola | nucleus | 21.25 | 17.42 |
| KRH60425 | Soybean | nucleus | 14.32 | 17.22 |
| CDY52133 | Canola | nucleus | 9.93 | 17.2 |
| VIT_07s0005g01010.t01 | Wine grape | nucleus | 21.02 | 17.04 |
| CDX76652 | Canola | nucleus | 15.7 | 16.23 |
| CDY11437 | Canola | nucleus | 15.7 | 16.19 |
| CDY36273 | Canola | mitochondrion | 8.78 | 15.9 |
| CDY02793 | Canola | nucleus | 22.63 | 15.65 |
| CDY32725 | Canola | nucleus | 22.4 | 15.57 |
| CDY32209 | Canola | nucleus | 15.7 | 14.41 |
| CDY34423 | Canola | nucleus | 15.7 | 14.32 |
| CDY67763 | Canola | nucleus | 19.63 | 14.31 |
| CDX98997 | Canola | nucleus | 18.71 | 13.52 |
| CDX70016 | Canola | nucleus | 18.71 | 13.5 |
| CDY49965 | Canola | mitochondrion | 10.39 | 13.35 |
| CDX81041 | Canola | nucleus | 17.32 | 13.25 |
| CDX78284 | Canola | nucleus | 17.32 | 13.2 |
| CDY14053 | Canola | nucleus | 19.17 | 11.1 |
| CDX86925 | Canola | nucleus | 16.17 | 10.34 |
| TraesCS7A01G539600.1 | Wheat | nucleus | 6.0 | 7.69 |
| CDY30695 | Canola | nucleus | 11.78 | 6.77 |
| TraesCSU01G179800.1 | Wheat | nucleus, plastid | 2.77 | 3.63 |
| TraesCSU01G196300.1 | Wheat | nucleus, plastid | 2.77 | 3.63 |
Protein Annotations
| Gene3D:1.10.10.60 | Gene3D:3.40.50.2300 | MapMan:35.1 | GO:A0A078H5S8 | UniProt:A0A078H5S8 | EnsemblPlants:CDY33920 |
| ProteinID:CDY33920 | ProteinID:CDY33920.1 | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00055429001 | InterPro:Homeobox-like_sf | InterPro:IPR001789 |
| InterPro:Myb_dom_plants | PFAM:PF00072 | PFscan:PS50110 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF32 | SMART:SM00448 |
| SUPFAM:SSF46689 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | TIGRFAMs:TIGR01557 | UniParc:UPI0004EE9221 | SEG:seg |
Description
BnaA02g30670DBnaA02g30670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H5S8]
Coordinates
chrLK032324:-:278338..281262
Molecular Weight (calculated)
49760.4 Da
IEP (calculated)
6.349
GRAVY (calculated)
-0.572
Length
433 amino acids
Sequence
(BLAST)
(BLAST)
001: MLTGKFPEGL RVLVYDEDFQ NLISLEKHLQ YFQYKVTICN EGADAMHMLR NHMNTFDIAI IEAQNSAVDI FRLISEIASE IDLPIIITSK DDSVQSVINW
101: MKIGVCDYLI KPIRPEDLRF IFKHVVKKMQ VGKRVESEEK ATAEKSSSVG DSTIRNPNKR KRSMFIDGQV GEKDQDHVRD STTKKRRVVW DNELKKKFLD
201: AMEDLGPEAV PKKILERMNV VGMTRENVAS HLQKHRMLLN RQKSHNEKDE KKRSLLSPQG GLHSGEGGSN IQFSTQHISN IPHQPFRHHP DGVPVAVSTR
301: NLLMTNQHHL QTSDFTSIEN VEESLIFTEE DAEVSNLAFL FTQKSEEMSL SHLHEPVMAT TMLSNDNQMM NFHEQSILHT HSFPLSLTPS SFLDQKETIM
401: MMNVDEGLQQ WLLNEQEQPN LTDENRFSSI NPR
101: MKIGVCDYLI KPIRPEDLRF IFKHVVKKMQ VGKRVESEEK ATAEKSSSVG DSTIRNPNKR KRSMFIDGQV GEKDQDHVRD STTKKRRVVW DNELKKKFLD
201: AMEDLGPEAV PKKILERMNV VGMTRENVAS HLQKHRMLLN RQKSHNEKDE KKRSLLSPQG GLHSGEGGSN IQFSTQHISN IPHQPFRHHP DGVPVAVSTR
301: NLLMTNQHHL QTSDFTSIEN VEESLIFTEE DAEVSNLAFL FTQKSEEMSL SHLHEPVMAT TMLSNDNQMM NFHEQSILHT HSFPLSLTPS SFLDQKETIM
401: MMNVDEGLQQ WLLNEQEQPN LTDENRFSSI NPR
001: MQPLNMAEIL DHRGVLTDGD DGPFRNLTNF YDMFSSNFPE GLRVLVFDED PSYLLILERH LQKFQYQVTI CNEVNKAMHT LRNHRNRFDL AMIQVNNAEG
101: DIFRFLSEIG SEMDLPIIII SEDDSVKSVK KWMINGAADY LIKPIRPEDL RIVFKHLVKK MRERRSVVTG EAEKAAGEKS SSVGDSTIRN PNKSKRSSCL
201: EAEVNEEDRH DHNDRACASS AKKRRVVWDE ELHQNFLNAV DFLGLERAVP KKILDVMKVD YISRENVASH LQVTFLIYNI IVHFQQHFCF YS
101: DIFRFLSEIG SEMDLPIIII SEDDSVKSVK KWMINGAADY LIKPIRPEDL RIVFKHLVKK MRERRSVVTG EAEKAAGEKS SSVGDSTIRN PNKSKRSSCL
201: EAEVNEEDRH DHNDRACASS AKKRRVVWDE ELHQNFLNAV DFLGLERAVP KKILDVMKVD YISRENVASH LQVTFLIYNI IVHFQQHFCF YS
Arabidopsis Description
APRR4Putative two-component response regulator-like APRR4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ16]
SUBAcon: [cytoskeleton,nucleus,cytosol]
SUBAcon: [cytoskeleton,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.