Factsheet for Bra020652.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33920	Canola	nucleus	97.73	99.54
Bra037427.1-P	Field mustard	nucleus	37.19	60.07
AT5G49240.1	Thale cress	cytoskeleton, cytosol, nucleus	34.47	52.05
Bra001378.1-P	Field mustard	nucleus	8.84	39.8
Bra001641.1-P	Field mustard	cytosol	11.56	34.46
Bra001377.1-P	Field mustard	nucleus	9.07	29.63
VIT_11s0052g01160.t01	Wine grape	cytosol	14.06	28.7
Bra026635.1-P	Field mustard	nucleus	21.54	25.2
Zm00001d032784_P001	Maize	nucleus	18.82	24.63
GSMUA_Achr5P13050_001	Banana	cytosol	12.24	23.58
KXG38401	Sorghum	nucleus	18.14	23.05
Bra004076.1-P	Field mustard	nucleus	23.36	20.24
Bra004245.1-P	Field mustard	nucleus	23.36	20.12
Bra012743.1-P	Field mustard	nucleus	26.76	19.93
Bra023972.1-P	Field mustard	nucleus	23.36	19.88
Bra004593.1-P	Field mustard	nucleus	10.88	19.43
PGSC0003DMT400090747	Potato	nucleus	24.26	19.14
Bra033809.1-P	Field mustard	nucleus	12.24	18.95
Bra033527.1-P	Field mustard	nucleus	26.98	18.8
Bra014172.1-P	Field mustard	nucleus	19.05	18.71
Bra029866.1-P	Field mustard	nucleus	12.02	18.53
Bra032035.1-P	Field mustard	nucleus	24.26	18.42
Solyc12g099380.1.1	Tomato	nucleus	22.9	18.2
Bra018204.1-P	Field mustard	nucleus	12.47	18.09
Bra032275.1-P	Field mustard	nucleus	20.63	18.02
Os10t0463400-01	Rice	nucleus	13.83	17.89
KRH60425	Soybean	nucleus	14.51	17.78
Bra001643.1-P	Field mustard	nucleus	25.85	17.54
Bra005837.1-P	Field mustard	nucleus	9.98	17.53
VIT_07s0005g01010.t01	Wine grape	nucleus	20.86	17.23
Bra009087.1-P	Field mustard	nucleus	10.43	17.23
Bra022183.1-P	Field mustard	nucleus	26.3	17.03
Bra041027.1-P	Field mustard	nucleus	15.65	16.43
Bra020390.1-P	Field mustard	nucleus	22.22	15.73
Bra034144.1-P	Field mustard	nucleus	11.34	15.38
Bra005928.1-P	Field mustard	nucleus	20.18	11.73
Bra009284.1-P	Field mustard	nucleus	19.95	11.38
Bra028705.1-P	Field mustard	nucleus	19.73	11.34
TraesCS7A01G539600.1	Wheat	nucleus	5.9	7.69
TraesCSU01G179800.1	Wheat	nucleus, plastid	2.72	3.63
TraesCSU01G196300.1	Wheat	nucleus, plastid	2.72	3.63

Protein Annotations

Gene3D:1.10.10.60	Gene3D:3.40.50.2300	MapMan:35.1	EnsemblPlantsGene:Bra020652	EnsemblPlants:Bra020652.1	EnsemblPlants:Bra020652.1-P
InterPro:CheY-like_superfamily	GO:GO:0000160	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR001789	UniProt:M4DVV8	InterPro:Myb_dom_plants	PFAM:PF00072
PFscan:PS50110	PANTHER:PTHR43874	PANTHER:PTHR43874:SF32	SMART:SM00448	SUPFAM:SSF46689	SUPFAM:SSF52172
InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI000254650E	SEG:seg	:	:

Description

AT5G49240 (E=2e-069) APRR4, PRR4 | APRR4 (PSEUDO-RESPONSE REGULATOR 4); transcription factor/ two-component response regulator

Coordinates

chrA02:+:23932327..23935397

Molecular Weight (calculated)

50684.5 Da

IEP (calculated)

6.349

GRAVY (calculated)

-0.568

Length

441 amino acids

Sequence
(BLAST)

001: MLTGKFPEGL RVLVYDEDFQ NLISLEKHLQ YFQYKVTICN EGADAMHMLR NHMNTFDIAI IEAQNSAVDI FRLISEIASE IDLPIIITSK DDSVQSVINW
101: MKIGVCDYLI KPIRPEDLRF IFKHVVKKMQ VGKRVESEEK ATAEKSSSVG DSTIRNPNKR KRSMFIDGQV GEKDQDHVRD STTKKRRVVW DNELKKKFLD
201: AMEDLGPEAV PKKILERMNV VGMTRENVAS HLQKHRMLLN RQKSHNEKDE KKRSLLSPQG GLHSGEGGSN IQFSTQHISN IPHQPFRHHP DGVPVVVSTR
301: NLLMTNQHHL QTSDFTSIEN VEESLIFTEE DAEVSNLAFL FTQKSEEMSL SHLHEPVMAT TMLSNDNQLF PNQQQMMNFH EPSILHTHSF PLSLTPSSFL
401: DQKETIMMMN VDEGLQQWLL NEQEQPNLTD ENRFSSINPR A

Best Arabidopsis Sequence Match ( AT5G49240.1 )
(BLAST)

001: MQPLNMAEIL DHRGVLTDGD DGPFRNLTNF YDMFSSNFPE GLRVLVFDED PSYLLILERH LQKFQYQVTI CNEVNKAMHT LRNHRNRFDL AMIQVNNAEG
101: DIFRFLSEIG SEMDLPIIII SEDDSVKSVK KWMINGAADY LIKPIRPEDL RIVFKHLVKK MRERRSVVTG EAEKAAGEKS SSVGDSTIRN PNKSKRSSCL
201: EAEVNEEDRH DHNDRACASS AKKRRVVWDE ELHQNFLNAV DFLGLERAVP KKILDVMKVD YISRENVASH LQVTFLIYNI IVHFQQHFCF YS

Arabidopsis Description

APRR4Putative two-component response regulator-like APRR4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ16]
SUBAcon: [cytoskeleton,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.