CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH41726	Soybean	nucleus	42.22	37.91
KRH16193	Soybean	nucleus	12.22	21.78
KRH76596	Soybean	mitochondrion	6.94	20.66
KRH25649	Soybean	cytosol	11.11	17.62
KRH60428	Soybean	nucleus	11.67	17.07
KRH71692	Soybean	nucleus	12.22	16.92
KRH33116	Soybean	cytosol	13.33	16.84
KRH24748	Soybean	nucleus	13.06	15.36
KRG95053	Soybean	nucleus	13.06	15.06
CDY56439	Canola	nucleus	11.39	14.91
CDX86245	Canola	nucleus	11.11	14.65
Bra037427.1-P	Field mustard	nucleus	11.11	14.65
KRH29751	Soybean	nucleus	13.06	14.55
Bra020652.1-P	Field mustard	nucleus	17.78	14.51
KRH70359	Soybean	nucleus	25.28	14.38
CDY33920	Canola	nucleus	17.22	14.32
KRH66705	Soybean	nucleus	12.78	14.29
CDY05641	Canola	nucleus	17.5	14.13
Os10t0463400-01	Rice	nucleus	13.33	14.08
KRH41727	Soybean	nucleus	19.17	14.02
KRH49669	Soybean	nucleus	24.17	13.74
PGSC0003DMT400090747	Potato	nucleus	20.83	13.42
KRG93917	Soybean	cytosol	13.61	13.39
Solyc12g099380.1.1	Tomato	nucleus	20.28	13.15
Zm00001d032784_P001	Maize	nucleus	12.22	13.06
AT5G49240.1	Thale cress	cytoskeleton, cytosol, nucleus	10.56	13.01
KXG38401	Sorghum	nucleus	12.22	12.68
KRH61694	Soybean	nucleus	22.5	12.35
KRG97483	Soybean	nucleus	15.56	12.31
KRH02311	Soybean	nucleus	23.06	12.26
KRH50777	Soybean	nucleus	23.06	12.22
KRH58247	Soybean	cytosol	10.28	12.21
KRG93902	Soybean	nucleus	13.06	12.21
KRH12938	Soybean	nucleus	23.61	12.13
KRH12005	Soybean	nucleus	22.5	12.05
KRH37916	Soybean	nucleus	23.33	12.03
KRH42619	Soybean	nucleus	16.94	11.96
KRH38615	Soybean	nucleus	17.5	11.93
KRH52361	Soybean	nucleus	22.78	11.78
KRH37035	Soybean	nucleus	21.39	11.44
VIT_07s0005g01010.t01	Wine grape	nucleus	16.67	11.24
KRH15779	Soybean	nucleus	20.83	11.16
KRH05273	Soybean	nucleus	20.56	11.09
KRH20086	Soybean	nucleus	20.56	10.88
KRH03086	Soybean	nucleus	20.0	10.57
KRH31403	Soybean	nucleus	17.5	10.43
VIT_11s0052g01160.t01	Wine grape	cytosol	6.11	10.19
KRH09142	Soybean	nucleus	18.89	10.16
KRH58726	Soybean	endoplasmic reticulum, extracellular	17.78	10.08
TraesCS7A01G539600.1	Wheat	nucleus	7.78	8.28
GSMUA_Achr5P13050_001	Banana	cytosol	5.0	7.86
TraesCSU01G179800.1	Wheat	nucleus, plastid	3.61	3.93
TraesCSU01G196300.1	Wheat	nucleus, plastid	3.61	3.93

Protein Annotations

Gene3D:1.10.10.60	MapMan:35.1	UniProt:A0A0R0K547	EMBL:ACUP02003364	EnsemblPlantsGene:GLYMA_05G239500	GO:GO:0000160
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf
InterPro:IPR017930	EnsemblPlants:KRH60425	ProteinID:KRH60425	ProteinID:KRH60425.1	InterPro:Myb_dom	InterPro:Myb_dom_plants
PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR43874	PANTHER:PTHR43874:SF32	InterPro:SANT/Myb	SUPFAM:SSF46689
TIGRFAMs:TIGR01557	UniParc:UPI0006ED9BC5	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:41517981..41520403

Molecular Weight (calculated)

40346.7 Da

IEP (calculated)

7.081

GRAVY (calculated)

-0.752

Length

360 amino acids

Sequence
(BLAST)

001: MWVHVARKAW NDNKVDIKCG RLEDNDKRKR EENDSKATRG GVKRGREPKR VNAGTSSKRQ RIVWTDELHN KFLDAVSQLG DINTAVPKRI LELMNVPGLT
101: REQVASHLQK YRHQLLKNNS NEVKMQQKNG EPLATTKPAR LEDQAFAVTG RVPCEMPIEE QWPNHPGPGV EQQGTSYGHH PPLNIGNAET RIPQSMIMNV
201: DEESGYRVWS PSADTMRQLS IQDNNALTMV DTLHLQHRQQ RQEPLIMHPP SVNLHPSCIL QVSEDSPIFH GYTTPAPAPA PAPAPPAFHA AANTLVPYVS
301: GSSDSLYQQP PLVNFGYDDK QMYIPGTPRG HQIKESAGDE DHDTLVDIYM STNTGFMTLL

Best Arabidopsis Sequence Match ( AT3G16857.3 )
(BLAST)

001: MALSLLRKNK HGFDIVISDV HMPDMDGFKL LEHVGLEMDL PVIMMSADDS KSVVLKGVTH GAVDYLIKPV RMEALKNIWQ HVVRKRRSEW SVPEHSGSIE
101: ETGERQQQQH RGGGGGAAVS GGEDAVDDNS SSVNEGNNWR SSSRKRKDEE GEEQGDDKDE DASNLKKPRV VWSVELHQQF VAAVNQLGVE KAVPKKILEL
201: MNVPGLTREN VASHLQKYRI YLRRLGGVSQ HQGNLNNSFM TGQDASFGPL STLNGFDLQA LAVTGQLPAQ SLAQLQAAGL GRPAMVSKSG LPVSSIVDER
301: SIFSFDNTKT RFGEGLGHHG QQPQQQPQMN LLHGVPTGLQ QQLPMGNRMS IQQQIAAVRA GNSVQNNGML MPLAGQQSLP RGPPPMLTSS QSSIRQPMLS
401: NRISERSGFS GRNNIPESSR VLPTSYTNLT TQHSSSSMPY NNFQPELPVN SFPLASAPGI SVPVRKATSY QEEVNSSEAG FTTPSYDMFT TRQNDWDLRN
501: IGIAFDSHQD SESAAFSASE AYSSSSMSRH NTTVAATEHG RNHQQPPSGM VQHHQVYADG NGGSVRVKSE RVATDTATMA FHEQYSNQED LMSALLKQEG
601: IAPVDGEFDF DAYSIDNIPV

Arabidopsis Description

ARR1Two-component response regulator ARR1 [Source:UniProtKB/Swiss-Prot;Acc:Q940D0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.