CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH12005	Soybean	nucleus	92.72	92.86
KRH50777	Soybean	nucleus	77.56	76.88
KRH02311	Soybean	nucleus	76.23	75.78
Bra001641.1-P	Field mustard	cytosol	15.9	72.3
CDY52720	Canola	nucleus	19.91	71.66
CDY54632	Canola	cytosol	15.6	70.95
CDY54630	Canola	cytosol	16.2	70.32
CDX82391	Canola	cytosol	15.16	68.92
PGSC0003DMT400065835	Potato	nucleus	60.48	60.3
Solyc01g065540.2.1	Tomato	nucleus	60.18	59.82
CDX75892	Canola	nucleus	39.38	58.63
CDX92102	Canola	nucleus	42.5	56.97
CDX95898	Canola	nucleus	41.9	55.84
Bra033527.1-P	Field mustard	nucleus	49.78	52.92
CDX82389	Canola	nucleus	46.06	50.9
AT3G16857.2	Thale cress	nucleus	51.11	49.86
CDY09718	Canola	nucleus	44.43	49.75
Bra022183.1-P	Field mustard	nucleus	50.22	49.63
Bra012743.1-P	Field mustard	nucleus	43.24	49.16
Bra001643.1-P	Field mustard	nucleus	47.1	48.77
CDX90546	Canola	nucleus	42.35	48.31
KRH16193	Soybean	nucleus	14.12	47.03
CDY32209	Canola	nucleus	32.69	46.61
CDY34423	Canola	nucleus	32.69	46.32
KRH33116	Soybean	cytosol	18.43	43.51
KRH60428	Soybean	nucleus	15.01	41.06
KRG97483	Soybean	nucleus	26.45	39.12
GSMUA_Achr5P16510_001	Banana	cytosol, nucleus, plastid	12.48	38.89
KRH70359	Soybean	nucleus	34.32	36.49
KRH49669	Soybean	nucleus	33.58	35.7
KRH25649	Soybean	cytosol	11.29	33.48
KRH15779	Soybean	nucleus	31.05	31.1
KRH12938	Soybean	nucleus	32.39	31.1
KRH37916	Soybean	nucleus	32.24	31.09
KRH31403	Soybean	nucleus	27.79	30.96
KRH61694	Soybean	nucleus	29.12	29.88
KRH05273	Soybean	nucleus	29.57	29.84
KRH58726	Soybean	endoplasmic reticulum, extracellular	28.08	29.76
KRG93917	Soybean	cytosol	15.9	29.23
KRH58247	Soybean	cytosol	12.93	28.71
KRH41726	Soybean	nucleus	17.09	28.68
KRH42619	Soybean	nucleus	21.69	28.63
KRH20086	Soybean	nucleus	28.38	28.09
KRH03086	Soybean	nucleus	28.38	28.05
KRH52361	Soybean	nucleus	28.53	27.59
KRH41727	Soybean	nucleus	19.76	27.03
KRG93902	Soybean	nucleus	15.16	26.49
KRH71692	Soybean	nucleus	9.21	23.85
KRH76596	Soybean	mitochondrion	4.16	23.14
KRH24748	Soybean	nucleus	10.4	22.88
KRG95053	Soybean	nucleus	10.4	22.44
KRH66705	Soybean	nucleus	10.55	22.05
KRH29751	Soybean	nucleus	10.55	21.98
KRH60425	Soybean	nucleus	11.44	21.39
KRH09142	Soybean	nucleus	19.02	19.13
KRH38615	Soybean	nucleus	14.12	17.99

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100781087	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	EMBL:ACUP02005408
InterPro:CheY-like_superfamily	EnsemblPlantsGene:GLYMA_09G040000	GO:GO:0000160	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	UniProt:I1L0U9	InterPro:IPR001789
InterPro:IPR017930	EnsemblPlants:KRH37035	ProteinID:KRH37035	ProteinID:KRH37035.1	InterPro:Myb_dom	InterPro:Myb_dom_plants
PFAM:PF00072	PFAM:PF00249	PIRSF:PIRSF036392	PFscan:PS50110	PFscan:PS51294	PANTHER:PTHR43874
PANTHER:PTHR43874:SF23	InterPro:Response_reg_B-typ_pln	InterPro:SANT/Myb	SMART:SM00448	SUPFAM:SSF46689	SUPFAM:SSF52172
InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI000233874F	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr9:-:3336087..3339417

Molecular Weight (calculated)

73849.4 Da

IEP (calculated)

6.552

GRAVY (calculated)

-0.497

Length

673 amino acids

Sequence
(BLAST)

001: MNLSHGKGST SSSPLKAGDT VSDQFPAGLR VLVVDDDPTC LMILERMLRA CLYEVTKCKR AEVALSLLRE NKNGFDIVLS DVHMPDMDGF KLLEHIGLEM
101: DLPVIMMSAD DGKQVVMKGV THGACDYLIK PVRIEALKNI WQHVVRMRKN GLRDVEQSGS MEEGDRPPKG SDDGNYSSSV NEAKSSKKRR DEDEEGDERD
201: DSSTLKKPRV VWSVELHQQF MAVVNQLGID KAVPKKILEL MNVPGLTREN VASHLQKYRL YLRRLSGVSQ QQGNLSNSFM SSQEATFGGT SINGIDLQTL
301: SAAGQFPSQS LAKFQAAGLG RTTAKAGMPM SLSDQKNLFS FENPRLRFGE GSLQHLSNSK PINLLHGILT NMEPKQLANL HQSTQPLGSL NMRVNSPATQ
401: NKPLLMQMTQ SQPRGQLLSE NASSHVTRYP SSLVQPTVPN GISSGVLGNA IAGTSNITTT YNPVQQNSSL LSFPMNQTNE MSASNFHLRS TPGITSIPNK
501: GMFHEEGTSG VKGSGGFVQG YDMFNDLHHQ KSHDWDLTNT GMTYDASQHA NPLQGNIDVS PSVLVHQSFP SMQQTVQNRD TTSIGKAMFS TGEGMHQSSL
601: QNIGQHHNNL LLDNSVRVKA ERIPDPSCQI NNLFSDQYGQ EDLVSAFLKQ QEGVGTAENE FDFDGYSLDN IPV

Best Arabidopsis Sequence Match ( AT3G16857.2 )
(BLAST)

001: MMNPSHGRGL GSAGGSSSGR NQGGGGETVV EMFPSGLRVL VVDDDPTCLM ILERMLRTCL YEVTKCNRAE MALSLLRKNK HGFDIVISDV HMPDMDGFKL
101: LEHVGLEMDL PVIMMSADDS KSVVLKGVTH GAVDYLIKPV RMEALKNIWQ HVVRKRRSEW SVPEHSGSIE ETGERQQQQH RGGGGGAAVS GGEDAVDDNS
201: SSVNEGNNWR SSSRKRKDEE GEEQGDDKDE DASNLKKPRV VWSVELHQQF VAAVNQLGVE KAVPKKILEL MNVPGLTREN VASHLQKYRI YLRRLGGVSQ
301: HQGNLNNSFM TGQDASFGPL STLNGFDLQA LAVTGQLPAQ SLAQLQAAGL GRPAMVSKSG LPVSSIVDER SIFSFDNTKT RFGEGLGHHG QQPQQQPQMN
401: LLHGVPTGLQ QQLPMGNRMS IQQQIAAVRA GNSVQNNGML MPLAGQQSLP RGPPPMLTSS QSSIRQPMLS NRISERSGFS GRNNIPESSR VLPTSYTNLT
501: TQHSSSSMPY NNFQPELPVN SFPLASAPGI SVPVRKATSY QEEVNSSEAG FTTPSYDMFT TRQNDWDLRN IGIAFDSHQD SESAAFSASE AYSSSSMSRH
601: NTTVAATEHG RNHQQPPSGM VQHHQVYADG NGGSVRVKSE RVATDTATMA FHEQYSNQED LMSALLKQEG IAPVDGEFDF DAYSIDNIPV

Arabidopsis Description

ARR1Two-component response regulator ARR1 [Source:UniProtKB/Swiss-Prot;Acc:Q940D0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.