CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH09142	Soybean	nucleus	76.89	60.69
KRH16193	Soybean	nucleus	9.28	24.26
KRH25649	Soybean	cytosol	9.09	21.15
KRH60428	Soybean	nucleus	9.47	20.33
Solyc11g072330.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	12.12	19.39
KRH71692	Soybean	nucleus	9.28	18.85
VIT_16s0100g00430.t01	Wine grape	nucleus	17.23	18.31
KRH33116	Soybean	cytosol	9.85	18.25
KRH76596	Soybean	mitochondrion	4.17	18.18
KRG95053	Soybean	nucleus	10.61	17.95
KRH66705	Soybean	nucleus	10.8	17.7
KRH60425	Soybean	nucleus	11.93	17.5
CDX81041	Canola	nucleus	17.99	16.78
KRG97483	Soybean	nucleus	14.39	16.7
KRH24748	Soybean	nucleus	9.66	16.67
CDX78284	Canola	nucleus	17.61	16.37
AT2G27070.1	Thale cress	nucleus	17.61	16.26
Solyc03g026250.1.1	Tomato	nucleus	10.23	16.22
KRH42619	Soybean	nucleus	15.34	15.88
VIT_16s0100g00420.t01	Wine grape	nucleus	17.61	15.71
KRH29751	Soybean	nucleus	9.47	15.48
KRG93917	Soybean	cytosol	10.61	15.3
KRH41726	Soybean	nucleus	11.55	15.21
AT5G07210.1	Thale cress	nucleus	17.8	15.14
KRG93902	Soybean	nucleus	10.98	15.06
CDX98997	Canola	nucleus	17.05	15.03
KRH12938	Soybean	nucleus	19.7	14.84
CDX70016	Canola	nucleus	16.86	14.83
KRH37916	Soybean	nucleus	19.51	14.76
Solyc07g019550.1.1	Tomato	nucleus	10.23	14.71
KRH02311	Soybean	nucleus	18.75	14.62
KRH12005	Soybean	nucleus	18.56	14.58
KRH50777	Soybean	nucleus	18.75	14.58
KRH49669	Soybean	nucleus	17.42	14.53
CDY67763	Canola	nucleus	16.1	14.31
KRH61694	Soybean	nucleus	17.61	14.18
KRH37035	Soybean	nucleus	17.99	14.12
KRH15779	Soybean	nucleus	17.8	13.99
KRH70359	Soybean	nucleus	16.48	13.74
KRH31403	Soybean	nucleus	15.72	13.74
KRH03086	Soybean	nucleus	17.61	13.66
KRH52361	Soybean	nucleus	17.99	13.65
KRH58247	Soybean	cytosol	7.77	13.53
KRH05273	Soybean	nucleus	17.05	13.49
PGSC0003DMT400035788	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	5.3	12.9
Bra005928.1-P	Field mustard	nucleus	18.37	12.78
KRH58726	Soybean	endoplasmic reticulum, extracellular	15.34	12.76
KRH41727	Soybean	nucleus	11.74	12.6
KRH20086	Soybean	nucleus	15.72	12.21
Bra009284.1-P	Field mustard	nucleus	17.42	11.9
CDY14053	Canola	nucleus	16.1	11.36
Bra028705.1-P	Field mustard	nucleus	16.48	11.34
CDY30695	Canola	nucleus	15.15	10.62
CDX86925	Canola	nucleus	12.88	10.04

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.4.2.4	MapMan:15.5.23	UniProt:A0A0R0I8K9	EMBL:ACUP02005859	EnsemblPlantsGene:GLYMA_09G147100
GO:GO:0000160	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR001789	EnsemblPlants:KRH38615	ProteinID:KRH38615	ProteinID:KRH38615.1
InterPro:Myb_dom_plants	PFscan:PS50110	PANTHER:PTHR43874	PANTHER:PTHR43874:SF19	SUPFAM:SSF46689	InterPro:Sig_transdc_resp-reg_receiver
TIGRFAMs:TIGR01557	UniParc:UPI00023C8CD5	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:36499181..36502338

Molecular Weight (calculated)

58246.0 Da

IEP (calculated)

8.706

GRAVY (calculated)

-0.728

Length

528 amino acids

Sequence
(BLAST)

001: MSADGRSTVI SKSFANGAAQ YILKPFSADD FKDIWRYAKK LSIQNNEGGS VPGDNTSIQD VNSATSSNMN KRKRKYCPRM SSQMNKEGQS EESSRLVKKP
101: KVVWTTYLHN RFLLAIKQIG LEKAVPKTIV RVMNVPNLTR ENVASHLQKY RIFLKKVADK GLLEGLSNRD LRSRFASGLS ASMINDIQAK REKSRVPAQQ
201: FIKRIEHQSG YGGIANVVKP YNNVSSVTNT PLGRLHQFPH PCHKGLNLNT MLHNQRHGSS SNQARLGAQY SSFGSNARAN NIQQNMLGSY ANQPYYAQSS
301: YNNAGVVFPS DGVMGHGLMN FTNGLRGGMN HGANQFMYPN YGSFGNNHNL SNGQGVFAST SNAGEGCSRE LPKENIQGNL TLPQQQLQGN VAENDIGTSI
401: GENNFNQLNE DDFSDLFMML DEMDLNETGE NHNANDFLKS DFSISNHAVE SLEKSNRVCE VIINPTEGTS NMPDETSTSS NKSSNKMGGD DEHANMEPLD
501: RFVMNDVSSG NNSATDEASQ HTKKCSCY

Best Arabidopsis Sequence Match ( AT3G16857.3 )
(BLAST)

001: MALSLLRKNK HGFDIVISDV HMPDMDGFKL LEHVGLEMDL PVIMMSADDS KSVVLKGVTH GAVDYLIKPV RMEALKNIWQ HVVRKRRSEW SVPEHSGSIE
101: ETGERQQQQH RGGGGGAAVS GGEDAVDDNS SSVNEGNNWR SSSRKRKDEE GEEQGDDKDE DASNLKKPRV VWSVELHQQF VAAVNQLGVE KAVPKKILEL
201: MNVPGLTREN VASHLQKYRI YLRRLGGVSQ HQGNLNNSFM TGQDASFGPL STLNGFDLQA LAVTGQLPAQ SLAQLQAAGL GRPAMVSKSG LPVSSIVDER
301: SIFSFDNTKT RFGEGLGHHG QQPQQQPQMN LLHGVPTGLQ QQLPMGNRMS IQQQIAAVRA GNSVQNNGML MPLAGQQSLP RGPPPMLTSS QSSIRQPMLS
401: NRISERSGFS GRNNIPESSR VLPTSYTNLT TQHSSSSMPY NNFQPELPVN SFPLASAPGI SVPVRKATSY QEEVNSSEAG FTTPSYDMFT TRQNDWDLRN
501: IGIAFDSHQD SESAAFSASE AYSSSSMSRH NTTVAATEHG RNHQQPPSGM VQHHQVYADG NGGSVRVKSE RVATDTATMA FHEQYSNQED LMSALLKQEG
601: IAPVDGEFDF DAYSIDNIPV

Arabidopsis Description

ARR1Two-component response regulator ARR1 [Source:UniProtKB/Swiss-Prot;Acc:Q940D0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.