Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH66705 | Soybean | nucleus | 91.67 | 88.82 |
| KRH71692 | Soybean | nucleus | 58.33 | 70.0 |
| CDY52133 | Canola | nucleus | 47.76 | 59.6 |
| AT2G40970.1 | Thale cress | nucleus | 47.12 | 59.27 |
| Bra004593.1-P | Field mustard | nucleus | 46.79 | 59.11 |
| CDX79963 | Canola | nucleus | 46.79 | 59.11 |
| CDX80940 | Canola | nucleus | 46.15 | 59.02 |
| Bra005837.1-P | Field mustard | nucleus | 47.12 | 58.57 |
| CDY53674 | Canola | nucleus | 46.15 | 58.06 |
| GSMUA_Achr11P... | Banana | nucleus | 55.13 | 56.77 |
| GSMUA_Achr8P05880_001 | Banana | nucleus | 55.13 | 54.6 |
| GSMUA_Achr5P27500_001 | Banana | nucleus | 47.44 | 52.11 |
| HORVU1Hr1G064950.1 | Barley | nucleus | 48.72 | 49.84 |
| Zm00001d010280_P001 | Maize | nucleus | 47.12 | 49.16 |
| TraesCS1B01G268900.1 | Wheat | nucleus | 48.4 | 49.03 |
| TraesCS1D01G257700.1 | Wheat | nucleus | 48.4 | 48.87 |
| TraesCS1A01G258400.1 | Wheat | nucleus | 48.4 | 48.4 |
| Zm00001d038191_P001 | Maize | nucleus | 46.15 | 46.15 |
| KRH24748 | Soybean | nucleus | 36.22 | 36.93 |
| Os05t0412000-00 | Rice | nucleus | 48.08 | 36.32 |
| KRH29751 | Soybean | nucleus | 36.22 | 34.98 |
| KRH76596 | Soybean | mitochondrion | 13.14 | 33.88 |
| KRH16193 | Soybean | nucleus | 15.06 | 23.27 |
| KRH33116 | Soybean | cytosol | 15.71 | 17.19 |
| KRH25649 | Soybean | cytosol | 12.5 | 17.18 |
| KRH60428 | Soybean | nucleus | 12.82 | 16.26 |
| KRG93902 | Soybean | nucleus | 16.35 | 13.25 |
| KRH60425 | Soybean | nucleus | 15.06 | 13.06 |
| KRG93917 | Soybean | cytosol | 15.06 | 12.84 |
| KRG97483 | Soybean | nucleus | 16.99 | 11.65 |
| KRH12938 | Soybean | nucleus | 25.64 | 11.41 |
| KRH70359 | Soybean | nucleus | 22.76 | 11.22 |
| KRH37916 | Soybean | nucleus | 24.68 | 11.03 |
| KRH41726 | Soybean | nucleus | 14.1 | 10.97 |
| KRH49669 | Soybean | nucleus | 22.12 | 10.9 |
| KRH02311 | Soybean | nucleus | 23.4 | 10.78 |
| KRH41727 | Soybean | nucleus | 16.99 | 10.77 |
| KRH38615 | Soybean | nucleus | 17.95 | 10.61 |
| KRH50777 | Soybean | nucleus | 23.08 | 10.6 |
| KRH12005 | Soybean | nucleus | 22.76 | 10.57 |
| KRH37035 | Soybean | nucleus | 22.44 | 10.4 |
| KRH61694 | Soybean | nucleus | 21.79 | 10.37 |
| KRH03086 | Soybean | nucleus | 22.44 | 10.28 |
| KRH58247 | Soybean | cytosol | 9.94 | 10.23 |
| KRH42619 | Soybean | nucleus | 16.67 | 10.2 |
| KRH05273 | Soybean | nucleus | 21.79 | 10.19 |
| KRH20086 | Soybean | nucleus | 22.12 | 10.15 |
| KRH15779 | Soybean | nucleus | 21.47 | 9.97 |
| KRH52361 | Soybean | nucleus | 20.83 | 9.34 |
| KRH09142 | Soybean | nucleus | 19.87 | 9.27 |
| KRH58726 | Soybean | endoplasmic reticulum, extracellular | 18.27 | 8.98 |
| KRH31403 | Soybean | nucleus | 17.31 | 8.94 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100797237 | MapMan:27.1.6.3.1 | EMBL:ACUP02012075 | EnsemblPlantsGene:GLYMA_19G127000 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:Homeobox-like_sf | UniProt:I1N8N9 | InterPro:IPR017930 |
| EnsemblPlants:KRG95053 | ProteinID:KRG95053 | ProteinID:KRG95053.1 | InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00249 |
| PFscan:PS51294 | PANTHER:PTHR31442 | PANTHER:PTHR31442:SF1 | InterPro:SANT/Myb | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 |
| UniParc:UPI00023DD126 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr19:-:38565803..38568685
Molecular Weight (calculated)
34423.1 Da
IEP (calculated)
7.031
GRAVY (calculated)
-0.806
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MREDDSNWFS RWEEELPSPE ELMPLSQTLI TPDLAMAFDI RNPHTSNTAQ NQHHHHHQNQ QPPQLQQPSN PSSLPNPQQQ QQQQQQQQQQ PTSAEFADSG
101: ELGSGTAGEE PARTLKRPRL VWTPQLHKRF VDAVAHLGIK NAVPKTIMQL MSVDGLTREN VASHLQKYRL YLKRMQGISA AGPGGASGAV ADPATDHLFA
201: SSPVPAHFLH PAARPNSDHF LPFVPALHHH QQQQQMAAAA QYHRQVGHFG SPPNGHFENP FMSRPNLQRM GGGGGPVHNN HHPVSGYVED MESANAASGG
301: RKVLTLFPTG DD
101: ELGSGTAGEE PARTLKRPRL VWTPQLHKRF VDAVAHLGIK NAVPKTIMQL MSVDGLTREN VASHLQKYRL YLKRMQGISA AGPGGASGAV ADPATDHLFA
201: SSPVPAHFLH PAARPNSDHF LPFVPALHHH QQQQQMAAAA QYHRQVGHFG SPPNGHFENP FMSRPNLQRM GGGGGPVHNN HHPVSGYVED MESANAASGG
301: RKVLTLFPTG DD
001: MREDDSDWFA RWEEELPSPE ELMPISQSLI SPDLALAFDI RTPNHGNGNS NQPHHHHHHQ TTPPTPSQLQ LPSSQANSSA EFAADSADLG SGGAAGDEPA
101: RTLKRPRLVW TPQLHKRFVD AVAHLGIKNA VPKTIMQLMS VDGLTRENVA SHLQKYRLYL KRMQGLSSGG GAGSDPATDR LFASSPVPAH FLHPNRVPSS
201: DHFMPSFVPI ATLQQQQQMA AAAAAAAAAN PHLQPPQFHR QIAAAHFGSP TNGGFSSPTS NGQFGSPTSN GFGSPTTNGK FDPSFLAVRQ TQQQPIQRMS
301: TPSLHSPVSN YVEDLESANA NGGRTVLTLF PTRDD
101: RTLKRPRLVW TPQLHKRFVD AVAHLGIKNA VPKTIMQLMS VDGLTRENVA SHLQKYRLYL KRMQGLSSGG GAGSDPATDR LFASSPVPAH FLHPNRVPSS
201: DHFMPSFVPI ATLQQQQQMA AAAAAAAAAN PHLQPPQFHR QIAAAHFGSP TNGGFSSPTS NGQFGSPTSN GFGSPTTNGK FDPSFLAVRQ TQQQPIQRMS
301: TPSLHSPVSN YVEDLESANA NGGRTVLTLF PTRDD
Arabidopsis Description
Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SG82]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.