Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH24748 | Soybean | nucleus | 88.54 | 93.46 |
| VIT_06s0004g05120.t01 | Wine grape | nucleus | 63.47 | 65.92 |
| Solyc06g005680.2.1 | Tomato | nucleus | 50.15 | 60.9 |
| GSMUA_Achr5P07060_001 | Banana | nucleus | 43.03 | 60.7 |
| PGSC0003DMT400005490 | Potato | nucleus | 55.11 | 58.94 |
| Zm00001d011785_P001 | Maize | nucleus | 38.08 | 56.16 |
| Os01t0971800-00 | Rice | nucleus | 41.18 | 55.88 |
| Zm00001d041960_P001 | Maize | nucleus | 42.11 | 52.71 |
| GSMUA_Achr10P... | Banana | nucleus | 45.51 | 52.69 |
| CDX99104 | Canola | nucleus | 46.75 | 52.07 |
| CDX68392 | Canola | nucleus | 42.11 | 51.91 |
| CDX82988 | Canola | nucleus | 41.49 | 51.74 |
| KRH76596 | Soybean | mitochondrion | 19.2 | 51.24 |
| CDY61256 | Canola | nucleus | 43.03 | 50.73 |
| Bra018204.1-P | Field mustard | nucleus | 47.68 | 50.66 |
| Bra033809.1-P | Field mustard | nucleus | 44.58 | 50.53 |
| PGSC0003DMT400077979 | Potato | nucleus | 47.99 | 49.36 |
| HORVU3Hr1G114970.1 | Barley | nucleus | 41.8 | 49.27 |
| AT3G46640.3 | Thale cress | nucleus | 49.23 | 49.07 |
| AT5G59570.2 | Thale cress | nucleus | 45.2 | 48.99 |
| Solyc06g076350.2.1 | Tomato | nucleus | 47.68 | 47.83 |
| TraesCS3A01G526600.1 | Wheat | nucleus | 41.8 | 47.37 |
| TraesCS3D01G531900.1 | Wheat | nucleus | 41.18 | 47.33 |
| GSMUA_AchrUn_... | Banana | nucleus | 44.58 | 47.21 |
| TraesCS3B01G594300.1 | Wheat | nucleus | 41.49 | 46.69 |
| KRH71692 | Soybean | nucleus | 30.65 | 38.08 |
| KRG95053 | Soybean | nucleus | 34.98 | 36.22 |
| KRH66705 | Soybean | nucleus | 34.98 | 35.09 |
| KRH16193 | Soybean | nucleus | 14.86 | 23.76 |
| KRH60428 | Soybean | nucleus | 14.86 | 19.51 |
| KRH33116 | Soybean | cytosol | 15.79 | 17.89 |
| KRH25649 | Soybean | cytosol | 11.15 | 15.86 |
| KRH60425 | Soybean | nucleus | 14.55 | 13.06 |
| KRG93902 | Soybean | nucleus | 15.17 | 12.73 |
| KRG97483 | Soybean | nucleus | 17.34 | 12.31 |
| KRG93917 | Soybean | cytosol | 13.62 | 12.02 |
| KRH02311 | Soybean | nucleus | 24.77 | 11.82 |
| KRH50777 | Soybean | nucleus | 24.46 | 11.63 |
| KRH58247 | Soybean | cytosol | 10.22 | 10.89 |
| KRH37916 | Soybean | nucleus | 23.53 | 10.89 |
| KRH61694 | Soybean | nucleus | 21.98 | 10.82 |
| KRH41727 | Soybean | nucleus | 16.41 | 10.77 |
| KRH12005 | Soybean | nucleus | 22.29 | 10.71 |
| KRH15779 | Soybean | nucleus | 22.29 | 10.71 |
| KRH12938 | Soybean | nucleus | 23.22 | 10.7 |
| KRH05273 | Soybean | nucleus | 21.98 | 10.64 |
| KRH70359 | Soybean | nucleus | 20.74 | 10.58 |
| KRH37035 | Soybean | nucleus | 21.98 | 10.55 |
| KRH41726 | Soybean | nucleus | 13.0 | 10.47 |
| KRH49669 | Soybean | nucleus | 20.43 | 10.43 |
| KRH42619 | Soybean | nucleus | 16.41 | 10.39 |
| KRH52361 | Soybean | nucleus | 21.98 | 10.2 |
| KRH20086 | Soybean | nucleus | 20.43 | 9.71 |
| KRH03086 | Soybean | nucleus | 20.43 | 9.69 |
| KRH38615 | Soybean | nucleus | 15.48 | 9.47 |
| KRH31403 | Soybean | nucleus | 17.03 | 9.11 |
| KRH58726 | Soybean | endoplasmic reticulum, extracellular | 17.34 | 8.82 |
| KRH09142 | Soybean | nucleus | 17.65 | 8.52 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100802217 | MapMan:27.1.6.3.1 | EMBL:ACUP02006818 | EnsemblPlantsGene:GLYMA_11G136600 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:Homeobox-like_sf | UniProt:I1LJZ0 | InterPro:IPR017930 |
| EnsemblPlants:KRH29751 | ProteinID:KRH29751 | ProteinID:KRH29751.1 | ProteinID:KRH29752.1 | InterPro:Myb_dom | InterPro:Myb_dom_plants |
| PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR31442 | PANTHER:PTHR31442:SF12 | InterPro:SANT/Myb | SUPFAM:SSF46689 |
| TIGRFAMs:TIGR01557 | UniParc:UPI000233D297 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr11:-:10366710..10369847
Molecular Weight (calculated)
35286.1 Da
IEP (calculated)
6.354
GRAVY (calculated)
-0.811
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEEVKTSEY DEERVMEWEA GLPTANDLTP LSQPLIPPEL ASAFSILPEP HRTLLDVNRA SRNTLSTLRG GGGSVHQAFS SSNNNHNYDG DGDGGVEEEE
101: DDDDDRDGSG PDSRKQRKID CGAAEEADSA VQTETSAERT AVKRPRLVWT PQLHKRFVDV VAHLGIKNAV PKTIMQLMNV EGLTRENVAS HLQKYRLYLK
201: RMQGLSNEGP SASDQLFAST PVPQSLHDSA PPSNHSNGHG HGHGHSNGRG HGHGHGHGHL SVPMMSMPYP PPLMSMPYPP PMMSGMPHGH MGIPMPNSSA
301: TSAYHPYNML HQRDWPHLAP NDK
101: DDDDDRDGSG PDSRKQRKID CGAAEEADSA VQTETSAERT AVKRPRLVWT PQLHKRFVDV VAHLGIKNAV PKTIMQLMNV EGLTRENVAS HLQKYRLYLK
201: RMQGLSNEGP SASDQLFAST PVPQSLHDSA PPSNHSNGHG HGHGHSNGRG HGHGHGHGHL SVPMMSMPYP PPLMSMPYPP PMMSGMPHGH MGIPMPNSSA
301: TSAYHPYNML HQRDWPHLAP NDK
001: MGEEVQMSDY DVSGDGDRVS EWEMGLPSDE DLASLSYSLI PPNLAMAFSI TPERSRTIQD VNRASETTLS SLRGGSSGPN TSSSNNNVEE EDRVGSSSPG
101: SDSKKQKTSN GDGDDGGGVD PDSAMAAEEG DSGTEDLSGK TLKRPRLVWT PQLHKRFVDV VAHLGIKNAV PKTIMQLMNV EGLTRENVAS HLQKYRLYLK
201: RMQGLTNEGP SASDKLFSST PVPPQSFQDI GGGGGSSGNV GVPIPGAYGT QQMMQMPVYA HHMGMQGYHH QNHNHDPYHQ NHRHHHGAGG NGAFESNPYM
301: MQQNKFGSMA SYPSVGGGSA NEN
101: SDSKKQKTSN GDGDDGGGVD PDSAMAAEEG DSGTEDLSGK TLKRPRLVWT PQLHKRFVDV VAHLGIKNAV PKTIMQLMNV EGLTRENVAS HLQKYRLYLK
201: RMQGLTNEGP SASDKLFSST PVPPQSFQDI GGGGGSSGNV GVPIPGAYGT QQMMQMPVYA HHMGMQGYHH QNHNHDPYHQ NHRHHHGAGG NGAFESNPYM
301: MQQNKFGSMA SYPSVGGGSA NEN
Arabidopsis Description
PCL1Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J959]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.