CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH61694	Soybean	nucleus	85.49	90.7
KRH05273	Soybean	nucleus	64.8	67.62
KRH15779	Soybean	nucleus	63.36	65.62
KRH16193	Soybean	nucleus	16.09	55.45
KRH33116	Soybean	cytosol	22.56	55.09
VIT_04s0008g05900.t01	Wine grape	nucleus	53.88	54.11
KRH37916	Soybean	nucleus	43.39	43.27
Solyc07g005140.2.1	Tomato	nucleus	41.24	43.16
KRH12938	Soybean	nucleus	42.82	42.51
Solyc12g010330.1.1	Tomato	nucleus	41.95	41.24
GSMUA_Achr2P05130_001	Banana	nucleus	38.07	41.15
GSMUA_Achr11P...	Banana	nucleus	37.21	40.98
PGSC0003DMT400020233	Potato	nucleus	41.52	40.88
GSMUA_Achr10P...	Banana	nucleus	37.79	40.28
KRH60428	Soybean	nucleus	13.51	38.21
KRH20086	Soybean	nucleus	36.78	37.65
KRH03086	Soybean	nucleus	36.49	37.3
KRG97483	Soybean	nucleus	24.28	37.14
PGSC0003DMT400008290	Potato	nucleus	40.95	36.87
KRH25649	Soybean	cytosol	11.64	35.68
KRH31403	Soybean	nucleus	26.44	30.46
KRH50777	Soybean	nucleus	29.17	29.9
KRH70359	Soybean	nucleus	27.16	29.86
KRH02311	Soybean	nucleus	29.02	29.84
KRH49669	Soybean	nucleus	26.72	29.38
KRH12005	Soybean	nucleus	28.02	29.02
KRG93917	Soybean	cytosol	15.23	28.96
KRH58247	Soybean	cytosol	12.5	28.71
KRH37035	Soybean	nucleus	27.59	28.53
KRH41726	Soybean	nucleus	16.09	27.93
KRH58726	Soybean	endoplasmic reticulum, extracellular	25.0	27.4
KRH42619	Soybean	nucleus	19.54	26.67
KRH76596	Soybean	mitochondrion	4.6	26.45
Os06t0647200-02	Rice	nucleus	25.86	26.09
KRG93902	Soybean	nucleus	14.22	25.71
KRH41727	Soybean	nucleus	17.24	24.39
KRH71692	Soybean	nucleus	9.05	24.23
KRH24748	Soybean	nucleus	10.2	23.2
KRH60425	Soybean	nucleus	11.78	22.78
KRH29751	Soybean	nucleus	10.2	21.98
KRG95053	Soybean	nucleus	9.34	20.83
KRH66705	Soybean	nucleus	9.2	19.88
KRH09142	Soybean	nucleus	17.96	18.68
KRH38615	Soybean	nucleus	13.65	17.99

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100809002	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	EMBL:ACUP02003419
InterPro:CheY-like_superfamily	ncoils:Coil	EnsemblPlantsGene:GLYMA_06G063500	GO:GO:0000160	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	UniProt:I1K8P7
InterPro:IPR001789	InterPro:IPR017930	EnsemblPlants:KRH52361	ProteinID:KRH52361	ProteinID:KRH52361.1	InterPro:Myb_dom
InterPro:Myb_dom_plants	PFAM:PF00072	PFAM:PF00249	PIRSF:PIRSF036392	PFscan:PS50110	PFscan:PS51294
PANTHER:PTHR43874	PANTHER:PTHR43874:SF7	InterPro:Response_reg_B-typ_pln	InterPro:SANT/Myb	SMART:SM00448	SUPFAM:SSF46689
SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI0002339725	SEG:seg	:

Description

hypothetical protein

Coordinates

chr6:-:4813282..4818340

Molecular Weight (calculated)

76778.7 Da

IEP (calculated)

7.003

GRAVY (calculated)

-0.560

Length

696 amino acids

Sequence
(BLAST)

001: MTVEKKMNDS GDEFPVGMRV LAVDDDPTCL LVLETLLRRC QYHATTTNQA IKALALLREH KDKFDLVISD VHMPDMDGFK LLELVGLEMD LPVIMLSANG
101: DTKLVMKGIS HGACDYLLKP VRMEELKNIW QHVIRRKKFD SKEKNKTRNI DKPTSNSSNG LGSSGTGNSD HNEKLTKKRK DQDEDEDEEQ ENDHDNDDPS
201: AQKKPRVVWS VELHRKFVAA VNQLGIDKAV PKKILDLMNV EKLTRENVAS HLQKYRLYLK RISCVANQQT NMVVALGGAD PSYLRMNSVS GVGHIQSISG
301: SGQLHNNAFR SFPPSGIINR LNTPAGLNVH GFPSGVLQLS QSQNLKNTND NLKFQSAIVP ANQNGVHGMT VSVGLDQLQN NKGVMSVQNL TTVFDAKTTF
401: PISNKLPDPR PKITNSGSHT PDVSFSNNAL MLEPRPQGTQ GSVRIETLSS SVASQHSEFS LSLLDQGRYS DNWASTVQPS VIQTNSYPPS ECFGQTNIPP
501: TDNMASVPLQ GGNLSGASIT SLSRQSYDSM TDMHSEGVTF TNRPGHISSN VPYQGWHDNN QDATHHSNIL SINSLTPVNG AAVPAGHAAM NSALHRNLDF
601: NYCDPLQMKH EGFVELTDEA LSKQHQGNIM NLPKSQQSHF SNNLGSLEDL VSSMMKQEND KMKLLDGNLI CNNYSGGLSR CDSRFSSTFQ NIMHPR

Best Arabidopsis Sequence Match ( AT2G25180.1 )
(BLAST)

001: MTVEQNLEAL DQFPVGMRVL AVDDDQTCLK ILESLLRHCQ YHVTTTNQAQ KALELLRENK NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI

Arabidopsis Description

ARR12Two-component response regulator ARR12 [Source:UniProtKB/Swiss-Prot;Acc:P62598]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.