Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g005140.2.1 | Tomato | nucleus | 82.54 | 95.94 |
| PGSC0003DMT400020233 | Potato | nucleus | 63.39 | 69.31 |
| GSMUA_AchrUn_... | Banana | nucleus | 21.99 | 63.91 |
| TraesCS7B01G408600.1 | Wheat | cytosol | 11.0 | 62.5 |
| VIT_11s0206g00060.t01 | Wine grape | nucleus | 52.78 | 58.87 |
| TraesCS7A01G510400.1 | Wheat | cytosol | 6.21 | 57.14 |
| TraesCS7D01G499700.1 | Wheat | cytosol | 7.89 | 57.01 |
| KRH16193 | Soybean | nucleus | 14.62 | 55.94 |
| TraesCS7A01G539700.1 | Wheat | cytosol, nucleus, plastid | 8.02 | 55.86 |
| Zm00001d036803_P001 | Maize | cytosol | 7.37 | 53.77 |
| TraesCS7B01G421000.1 | Wheat | cytosol | 7.37 | 53.27 |
| TraesCS7B01G420800.1 | Wheat | cytosol | 7.24 | 52.34 |
| KRH37916 | Soybean | nucleus | 45.28 | 50.14 |
| KRH33116 | Soybean | cytosol | 18.37 | 49.82 |
| KRH12938 | Soybean | nucleus | 44.76 | 49.36 |
| KXG20365 | Sorghum | cytosol | 6.47 | 46.3 |
| CDX87845 | Canola | cytosol, extracellular | 8.02 | 46.27 |
| HORVU7Hr1G112860.2 | Barley | cytosol | 12.29 | 45.24 |
| VIT_04s0008g05900.t01 | Wine grape | nucleus | 40.23 | 44.88 |
| KRH61694 | Soybean | nucleus | 36.87 | 43.45 |
| CDY13465 | Canola | nucleus | 28.98 | 43.24 |
| Bra023972.1-P | Field mustard | nucleus | 28.85 | 43.05 |
| CDX72337 | Canola | nucleus | 29.11 | 43.02 |
| KRH03086 | Soybean | nucleus | 37.52 | 42.58 |
| CDX68803 | Canola | nucleus | 28.07 | 42.47 |
| GSMUA_Achr11P... | Banana | nucleus | 34.67 | 42.41 |
| GSMUA_Achr2P05130_001 | Banana | nucleus | 35.19 | 42.24 |
| KRH05273 | Soybean | nucleus | 36.22 | 41.98 |
| AT4G31920.1 | Thale cress | nucleus | 29.75 | 41.67 |
| GSMUA_Achr10P... | Banana | nucleus | 35.19 | 41.65 |
| KRH20086 | Soybean | nucleus | 36.61 | 41.62 |
| CDY70103 | Canola | nucleus | 31.05 | 41.59 |
| Bra032035.1-P | Field mustard | nucleus | 31.18 | 41.48 |
| CDY35371 | Canola | nucleus | 31.18 | 41.48 |
| KRH15779 | Soybean | nucleus | 35.83 | 41.22 |
| EES06387 | Sorghum | nucleus | 33.64 | 41.2 |
| KRH52361 | Soybean | nucleus | 36.87 | 40.95 |
| Os02t0182100-01 | Rice | nucleus | 33.12 | 40.89 |
| AT2G25180.1 | Thale cress | nucleus | 31.18 | 40.44 |
| GSMUA_Achr3P13400_001 | Banana | nucleus | 32.73 | 40.29 |
| Zm00001d015521_P001 | Maize | nucleus | 32.86 | 40.25 |
| TraesCS6B01G174400.1 | Wheat | nucleus | 32.34 | 40.19 |
| HORVU6Hr1G028680.1 | Barley | nucleus | 32.21 | 39.97 |
| TraesCS6A01G146200.3 | Wheat | nucleus | 32.21 | 38.91 |
| Os02t0796500-01 | Rice | nucleus | 34.41 | 38.66 |
| TraesCS6D01G135500.3 | Wheat | nucleus | 32.21 | 38.6 |
| TraesCS6D01G342200.1 | Wheat | nucleus | 33.25 | 38.07 |
| TraesCS6B01G392000.1 | Wheat | nucleus | 32.99 | 37.83 |
| TraesCS6A01G359200.1 | Wheat | nucleus | 32.99 | 37.72 |
| HORVU7Hr1G112830.1 | Barley | cytosol, nucleus | 8.28 | 37.65 |
| Zm00001d045112_P001 | Maize | nucleus | 32.34 | 37.37 |
| KXG19480 | Sorghum | nucleus | 32.08 | 36.9 |
| EES07684 | Sorghum | nucleus | 32.08 | 36.74 |
| TraesCS7D01G148000.1 | Wheat | nucleus | 28.46 | 36.61 |
| Os06t0183100-01 | Rice | nucleus | 32.6 | 36.21 |
| TraesCS7A01G146400.1 | Wheat | nucleus | 28.72 | 36.16 |
| HORVU6Hr1G085560.5 | Barley | nucleus | 31.95 | 36.06 |
| HORVU7Hr1G030050.1 | Barley | nucleus | 28.98 | 35.78 |
| GSMUA_Achr10P... | Banana | nucleus | 20.05 | 35.71 |
| TraesCS7A01G146500.1 | Wheat | nucleus | 27.94 | 35.7 |
| TraesCS7D01G148200.1 | Wheat | nucleus | 30.4 | 35.66 |
| TraesCS7A01G146700.1 | Wheat | nucleus | 30.27 | 35.51 |
| TraesCS7B01G049200.1 | Wheat | nucleus | 30.14 | 35.46 |
| TraesCS7B01G049000.1 | Wheat | nucleus | 28.59 | 35.42 |
| Zm00001d018380_P001 | Maize | nucleus | 27.81 | 34.9 |
| HORVU7Hr1G114130.2 | Barley | nucleus | 21.22 | 33.47 |
| TraesCS7D01G489600.1 | Wheat | nucleus | 21.73 | 33.47 |
| TraesCS7A01G510300.1 | Wheat | nucleus | 21.09 | 32.67 |
| PGSC0003DMT400060506 | Potato | nucleus | 27.68 | 32.28 |
| TraesCS7D01G499600.1 | Wheat | nucleus | 20.44 | 31.85 |
| PGSC0003DMT400075907 | Potato | nucleus | 26.91 | 31.85 |
| TraesCS3B01G517000.1 | Wheat | nucleus | 23.29 | 31.52 |
| HORVU7Hr1G030000.4 | Barley | nucleus | 30.27 | 31.49 |
| TraesCS7D01G525900.1 | Wheat | nucleus | 23.42 | 31.26 |
| CDY02794 | Canola | nucleus | 19.28 | 31.24 |
| TraesCS7B01G422000.1 | Wheat | nucleus | 22.64 | 31.08 |
| TraesCS3A01G473600.1 | Wheat | nucleus | 22.9 | 31.0 |
| TraesCS7A01G511300.1 | Wheat | nucleus | 22.9 | 31.0 |
| TraesCS7A01G502300.1 | Wheat | nucleus | 22.51 | 30.69 |
| TraesCS7D01G500600.1 | Wheat | nucleus | 22.64 | 30.65 |
| TraesCSU01G040900.1 | Wheat | nucleus | 22.64 | 30.65 |
| HORVU7Hr1G114450.2 | Barley | nucleus | 23.54 | 30.59 |
| TraesCS7A01G511100.1 | Wheat | nucleus | 22.51 | 30.47 |
| OQU78916 | Sorghum | nucleus | 21.6 | 30.31 |
| TraesCS7B01G420900.1 | Wheat | nucleus | 19.4 | 30.3 |
| PGSC0003DMT400065835 | Potato | nucleus | 26.13 | 29.93 |
| TraesCS7B01G422100.1 | Wheat | nucleus | 21.86 | 29.6 |
| PGSC0003DMT400090747 | Potato | nucleus | 21.35 | 29.52 |
| PGSC0003DMT400031260 | Potato | nucleus | 21.99 | 29.31 |
| TraesCS7B01G408700.1 | Wheat | nucleus | 23.42 | 28.73 |
| PGSC0003DMT400035788 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 8.02 | 28.57 |
| HORVU7Hr1G118290.2 | Barley | nucleus | 22.25 | 28.52 |
| TraesCSU01G105200.1 | Wheat | nucleus | 18.5 | 27.5 |
| PGSC0003DMT400072213 | Potato | nucleus | 9.44 | 27.44 |
| Zm00001d046755_P001 | Maize | nucleus | 23.29 | 26.83 |
| Os06t0647200-02 | Rice | nucleus | 23.8 | 26.67 |
| TraesCS3A01G473800.1 | Wheat | nucleus | 19.4 | 26.6 |
| Zm00001d036802_P001 | Maize | nucleus | 13.32 | 26.55 |
| CDY02793 | Canola | nucleus | 21.47 | 26.52 |
| Bra020390.1-P | Field mustard | nucleus | 21.35 | 26.48 |
| CDY32725 | Canola | nucleus | 21.35 | 26.48 |
| CDY49965 | Canola | mitochondrion | 11.51 | 26.41 |
| HORVU7Hr1G112890.1 | Barley | nucleus | 22.9 | 26.22 |
| AT5G58080.1 | Thale cress | nucleus | 21.47 | 26.14 |
| HORVU7Hr1G112840.1 | Barley | nucleus | 21.99 | 26.03 |
| PGSC0003DMT400077979 | Potato | nucleus | 10.35 | 25.48 |
| EES09342 | Sorghum | nucleus | 22.77 | 25.36 |
| KXG20364 | Sorghum | nucleus | 21.6 | 25.0 |
| PGSC0003DMT400018485 | Potato | nucleus | 9.31 | 24.83 |
| KXG20361 | Sorghum | nucleus | 21.47 | 24.74 |
| PGSC0003DMT400005490 | Potato | nucleus | 9.44 | 24.17 |
| OQU76785 | Sorghum | nucleus | 16.3 | 23.25 |
| PGSC0003DMT400089008 | Potato | nucleus | 14.62 | 19.38 |
| EER90120 | Sorghum | nucleus | 12.55 | 17.8 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:102598455 | MapMan:11.4.2.4 | MapMan:15.5.23 | Gene3D:3.40.50.2300 | Gene3D:3.40.50.300 |
| InterPro:ATPase_AAA_core | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:Homeobox-like_sf |
| InterPro:IPR001789 | InterPro:IPR017930 | UniProt:M0ZUD0 | InterPro:Myb_dom | InterPro:Myb_dom_plants | InterPro:P-loop_NTPase |
| PFAM:PF00004 | PFAM:PF00072 | EnsemblPlantsGene:PGSC0003DMG400003196 | PGSC:PGSC0003DMG400003196 | EnsemblPlants:PGSC0003DMT400008290 | PIRSF:PIRSF036392 |
| PFscan:PS50110 | PFscan:PS51294 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF8 | InterPro:Response_reg_B-typ_pln | SMART:SM00448 |
| SUPFAM:SSF46689 | SUPFAM:SSF52172 | SUPFAM:SSF52540 | InterPro:Sig_transdc_resp-reg_receiver | TIGRFAMs:TIGR01557 | UniParc:UPI00029597E6 |
| SEG:seg | : | : | : | : | : |
Description
Two-component system sensor histidine kinase/response regulator [Source:PGSC_GENE;Acc:PGSC0003DMG400003196]
Coordinates
chr7:+:402301..406809
Molecular Weight (calculated)
85317.5 Da
IEP (calculated)
6.727
GRAVY (calculated)
-0.599
Length
773 amino acids
Sequence
(BLAST)
(BLAST)
001: MTVEEIRGNM GGGERGNNYD NFPIGMRVLA VDDDPICLKL LDGLLRKCQY QVTTTSQARM ALKMLRENRD RFDLVISDVH MPDMDGFKLL ELVGLEMDLP
101: VIMLSANSDT KLVRKGIDHG ACDYLVKPVR IEELRNIWQH VIRKKKVEPK SQSKSNDQDK SYQVSGESGR GQSPTGNVDQ NGKCNKKRKD EEDENDENGN
201: DDEDPTTQKR ARVVWSIELH RKFVAAVGQL GIEKAVPKRI LDLMNVDGLT RENVASHLQA LPVGEVGETK SMYKEIVLGG DVWDLLDELM IYMGNPMQYY
301: EKDVKFVRGV LLSGPPGTGK TLFARTLAKE SGMPFVFASG AEFTDSEKSG AARINEMFSV ARRNKYRLYL KRINSVQTQQ ANMVAALGGR DYVRMGSLDG
401: LGDFRTLGGS GRYTHAALSS YSSGGMLGRL NSAAGLSVRN LAASQLLQPS HGQNLSNSVN AFTKLNPNIP PASQNASLFQ GIPASLELDQ LQQSKSSAHI
501: PLDESRLLTA EVLGCSNNSL SNVPNIPMLL QGNPQQPLTG GGFGNQHSQN MTPFSSDSFN TGVNGSSNFL EHGRCNENWQ NSIQLSKFQS NSFPLTESFI
601: NSHLPQNSVR EATTHLQNSP LDFTSTTSVS PPFEDSRGEI QYRQSMAGAV QSMNQTPSQA WADNKQHYSH NSNNTFGNNL RSQVPNDGNM ASLSHSMNQS
701: NENFGRRMDM SLIGRSSGGS STLVQQTEHE KLTLDSRTRS NEDYLLEPTK QQVGFSPQGY DSLDDLMTAM KRV
101: VIMLSANSDT KLVRKGIDHG ACDYLVKPVR IEELRNIWQH VIRKKKVEPK SQSKSNDQDK SYQVSGESGR GQSPTGNVDQ NGKCNKKRKD EEDENDENGN
201: DDEDPTTQKR ARVVWSIELH RKFVAAVGQL GIEKAVPKRI LDLMNVDGLT RENVASHLQA LPVGEVGETK SMYKEIVLGG DVWDLLDELM IYMGNPMQYY
301: EKDVKFVRGV LLSGPPGTGK TLFARTLAKE SGMPFVFASG AEFTDSEKSG AARINEMFSV ARRNKYRLYL KRINSVQTQQ ANMVAALGGR DYVRMGSLDG
401: LGDFRTLGGS GRYTHAALSS YSSGGMLGRL NSAAGLSVRN LAASQLLQPS HGQNLSNSVN AFTKLNPNIP PASQNASLFQ GIPASLELDQ LQQSKSSAHI
501: PLDESRLLTA EVLGCSNNSL SNVPNIPMLL QGNPQQPLTG GGFGNQHSQN MTPFSSDSFN TGVNGSSNFL EHGRCNENWQ NSIQLSKFQS NSFPLTESFI
601: NSHLPQNSVR EATTHLQNSP LDFTSTTSVS PPFEDSRGEI QYRQSMAGAV QSMNQTPSQA WADNKQHYSH NSNNTFGNNL RSQVPNDGNM ASLSHSMNQS
701: NENFGRRMDM SLIGRSSGGS STLVQQTEHE KLTLDSRTRS NEDYLLEPTK QQVGFSPQGY DSLDDLMTAM KRV
001: MTVEQNLEAL DQFPVGMRVL AVDDDQTCLK ILESLLRHCQ YHVTTTNQAQ KALELLRENK NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI
Arabidopsis Description
ARR12Two-component response regulator ARR12 [Source:UniProtKB/Swiss-Prot;Acc:P62598]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.