Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g091810.1.1 | Tomato | nucleus | 94.85 | 95.67 |
| CDX73905 | Canola | nucleus | 6.52 | 38.0 |
| Bra001378.1-P | Field mustard | nucleus | 6.17 | 36.73 |
| CDX73907 | Canola | nucleus | 7.2 | 31.11 |
| Bra001377.1-P | Field mustard | nucleus | 7.03 | 30.37 |
| PGSC0003DMT400035788 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 8.58 | 23.04 |
| PGSC0003DMT400060506 | Potato | nucleus | 22.64 | 19.91 |
| PGSC0003DMT400065835 | Potato | nucleus | 22.81 | 19.7 |
| PGSC0003DMT400077979 | Potato | nucleus | 10.12 | 18.79 |
| PGSC0003DMT400090747 | Potato | nucleus | 18.01 | 18.78 |
| PGSC0003DMT400072213 | Potato | nucleus | 8.4 | 18.42 |
| PGSC0003DMT400018485 | Potato | nucleus | 8.92 | 17.93 |
| PGSC0003DMT400020233 | Potato | nucleus | 20.93 | 17.26 |
| PGSC0003DMT400031260 | Potato | nucleus | 17.15 | 17.24 |
| PGSC0003DMT400005490 | Potato | nucleus | 8.92 | 17.22 |
| PGSC0003DMT400075907 | Potato | nucleus | 19.04 | 17.0 |
| PGSC0003DMT400008290 | Potato | nucleus | 19.38 | 14.62 |
Protein Annotations
| Gene3D:1.10.10.60 | Gene3D:3.40.50.2300 | MapMan:35.1 | InterPro:CheY-like_superfamily | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:Homeobox-like_sf | UniProt:M1DH86 | InterPro:Myb_dom_plants | EnsemblPlantsGene:PGSC0003DMG400038579 | PGSC:PGSC0003DMG400038579 |
| EnsemblPlants:PGSC0003DMT400089008 | PANTHER:PTHR31442 | PANTHER:PTHR31442:SF12 | SUPFAM:SSF46689 | SUPFAM:SSF52172 | TIGRFAMs:TIGR01557 |
| UniParc:UPI0002965F44 | : | : | : | : | : |
Description
Two-component system sensor histidine kinase/response regulator [Source:PGSC_GENE;Acc:PGSC0003DMG400038579]
Coordinates
chr1:-:71235278..71237736
Molecular Weight (calculated)
65707.0 Da
IEP (calculated)
5.156
GRAVY (calculated)
-0.552
Length
583 amino acids
Sequence
(BLAST)
(BLAST)
001: MDIPANSSVM GTKNICILLV LDDFTCHNIV SDMLHNQTYQ VLHVGKTMDT LNAVWERKSI FNLVLTNIHR LNTNGVDILQ IIKNKLNLPT IFMSPDDTRC
101: ENQVQDCSVG AYVVSFSDTN EMNKFWQMVL EKEKGRKAAV NQEENDSRLP QNVTAEISRE NTTSADTDVA IKAHDLKGKR KANSDRSEEN RDIEKKRRVV
201: WTPKMHQSFL QAIQYLGYEK AVPKKIVEIM NEPGLTREHV ASHLQKYRMC IKRAQESSAA SIYDQILTND ANAKCFQVQP YLSPLNFSGT RGYSHSIQQP
301: FQTHFQQGTG GMNCPTSGQM GSFQQQNSLL DFANLQQADH NGLIGQHSTY MPRVAHSSNF RVYGDKRKNM LFSIQSGNEN QPTNSSNSGL EFLGFRLSTD
401: GKSVNFGHKS SSCTVIPNNA YSGLCSSISE DYIHKQQSSP QFLETPTENT LIQSSSVQPE NLTFNHPSNS ISQQNLLLFD NAVNIISCEI PEMPDSFIPQ
501: EQLAAQPSSK DLEDYSAILF SDDEVYVPSL ENYDSIQQQY SAPEFPQVTL EVNSLGTEID IKSLLETTED RSTQLFWEEN ELL
101: ENQVQDCSVG AYVVSFSDTN EMNKFWQMVL EKEKGRKAAV NQEENDSRLP QNVTAEISRE NTTSADTDVA IKAHDLKGKR KANSDRSEEN RDIEKKRRVV
201: WTPKMHQSFL QAIQYLGYEK AVPKKIVEIM NEPGLTREHV ASHLQKYRMC IKRAQESSAA SIYDQILTND ANAKCFQVQP YLSPLNFSGT RGYSHSIQQP
301: FQTHFQQGTG GMNCPTSGQM GSFQQQNSLL DFANLQQADH NGLIGQHSTY MPRVAHSSNF RVYGDKRKNM LFSIQSGNEN QPTNSSNSGL EFLGFRLSTD
401: GKSVNFGHKS SSCTVIPNNA YSGLCSSISE DYIHKQQSSP QFLETPTENT LIQSSSVQPE NLTFNHPSNS ISQQNLLLFD NAVNIISCEI PEMPDSFIPQ
501: EQLAAQPSSK DLEDYSAILF SDDEVYVPSL ENYDSIQQQY SAPEFPQVTL EVNSLGTEID IKSLLETTED RSTQLFWEEN ELL
001: MMNPSHGRGL GSAGGSSSGR NQGGGGETVV EMFPSGLRVL VVDDDPTCLM ILERMLRTCL YEVTKCNRAE MALSLLRKNK HGFDIVISDV HMPDMDGFKL
101: LEHVGLEMDL PVIMMSADDS KSVVLKGVTH GAVDYLIKPV RMEALKNIWQ HVVRKRRSEW SVPEHSGSIE ETGERQQQQH RGGGGGAAVS GGEDAVDDNS
201: SSVNEGNNWR SSSRKRKDEE GEEQGDDKDE DASNLKKPRV VWSVELHQQF VAAVNQLGVE KAVPKKILEL MNVPGLTREN VASHLQKYRI YLRRLGGVSQ
301: HQGNLNNSFM TGQDASFGPL STLNGFDLQA LAVTGQLPAQ SLAQLQAAGL GRPAMVSKSG LPVSSIVDER SIFSFDNTKT RFGEGLGHHG QQPQQQPQMN
401: LLHGVPTGLQ QQLPMGNRMS IQQQIAAVRA GNSVQNNGML MPLAGQQSLP RGPPPMLTSS QSSIRQPMLS NRISERSGFS GRNNIPESSR VLPTSYTNLT
501: TQHSSSSMPY NNFQPELPVN SFPLASAPGI SVPVRKATSY QEEVNSSEAG FTTPSYDMFT TRQNDWDLRN IGIAFDSHQD SESAAFSASE AYSSSSMSRH
601: NTTVAATEHG RNHQQPPSGM VQHHQVYADG NGGSVRVKSE RVATDTATMA FHEQYSNQED LMSALLKQEG IAPVDGEFDF DAYSIDNIPV
101: LEHVGLEMDL PVIMMSADDS KSVVLKGVTH GAVDYLIKPV RMEALKNIWQ HVVRKRRSEW SVPEHSGSIE ETGERQQQQH RGGGGGAAVS GGEDAVDDNS
201: SSVNEGNNWR SSSRKRKDEE GEEQGDDKDE DASNLKKPRV VWSVELHQQF VAAVNQLGVE KAVPKKILEL MNVPGLTREN VASHLQKYRI YLRRLGGVSQ
301: HQGNLNNSFM TGQDASFGPL STLNGFDLQA LAVTGQLPAQ SLAQLQAAGL GRPAMVSKSG LPVSSIVDER SIFSFDNTKT RFGEGLGHHG QQPQQQPQMN
401: LLHGVPTGLQ QQLPMGNRMS IQQQIAAVRA GNSVQNNGML MPLAGQQSLP RGPPPMLTSS QSSIRQPMLS NRISERSGFS GRNNIPESSR VLPTSYTNLT
501: TQHSSSSMPY NNFQPELPVN SFPLASAPGI SVPVRKATSY QEEVNSSEAG FTTPSYDMFT TRQNDWDLRN IGIAFDSHQD SESAAFSASE AYSSSSMSRH
601: NTTVAATEHG RNHQQPPSGM VQHHQVYADG NGGSVRVKSE RVATDTATMA FHEQYSNQED LMSALLKQEG IAPVDGEFDF DAYSIDNIPV
Arabidopsis Description
ARR1Two-component response regulator ARR1 [Source:UniProtKB/Swiss-Prot;Acc:Q940D0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.