CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU78916	Sorghum	nucleus	65.56	82.58
Zm00001d036803_P001	Maize	cytosol	12.1	79.25
KXG20361	Sorghum	nucleus	73.63	76.16
KXG20364	Sorghum	nucleus	70.46	73.2
KXG20365	Sorghum	cytosol	10.81	69.44
OQU76785	Sorghum	nucleus	38.33	49.08
EER90120	Sorghum	nucleus	33.29	42.39
KRH16193	Soybean	nucleus	12.1	41.58
KRH33116	Soybean	cytosol	16.14	39.3
GSMUA_Achr10P...	Banana	nucleus	20.17	32.26
EES06387	Sorghum	nucleus	29.11	32.01
CDY02794	Canola	nucleus	19.88	28.93
KXG38401	Sorghum	nucleus	13.83	27.67
KXG19480	Sorghum	nucleus	25.79	26.64
Solyc07g005140.2.1	Tomato	nucleus	25.5	26.62
EES04061	Sorghum	nucleus	22.05	26.42
EES07684	Sorghum	nucleus	25.36	26.07
PGSC0003DMT400020233	Potato	nucleus	26.22	25.74
Solyc12g010330.1.1	Tomato	nucleus	25.94	25.42
KRH03086	Soybean	nucleus	24.5	24.96
KRH20086	Soybean	nucleus	23.63	24.12
CDY32725	Canola	nucleus	21.18	23.6
Bra020390.1-P	Field mustard	nucleus	21.18	23.6
CDY02793	Canola	nucleus	21.04	23.32
AT5G58080.1	Thale cress	nucleus	21.33	23.31
PGSC0003DMT400008290	Potato	nucleus	25.36	22.77
OQU92974	Sorghum	nucleus	22.05	22.3
KXG33682	Sorghum	mitochondrion, nucleus	7.64	19.34

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	EntrezGene:8070681	UniProt:C5Y5J4
InterPro:CheY-like_superfamily	EnsemblPlants:EES09342	ProteinID:EES09342	ProteinID:EES09342.1	GO:GO:0000160	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf
InterPro:IPR001789	InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00072	PIRSF:PIRSF036392
PFscan:PS50110	PFscan:PS51294	PANTHER:PTHR43874	PANTHER:PTHR43874:SF7	InterPro:Response_reg_B-typ_pln	SMART:SM00448
EnsemblPlantsGene:SORBI_3005G050700	SUPFAM:SSF46689	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI0001A86989
RefSeq:XP_002450354.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:4832757..4838092

Molecular Weight (calculated)

75487.8 Da

IEP (calculated)

6.102

GRAVY (calculated)

-0.450

Length

694 amino acids

Sequence
(BLAST)

001: MDADTFPAGL RVLAVDDDRV CLKILERQLK YCNYNATVVT DARTALDMLR ERKDGNQFDL VISDVVMPNM DGFKLLELIG LEMDLPVIML SANNETQTIM
101: KGIKHGACDY IVKPVRLEQL RGIWTHVVKN GKTDPRNTIS SGNDDDVQKL PSGDELPSGD ADKDENIAAN RRKKYSKKNK RIVEVADEDN ENTSAQKKQR
201: VRWCGQLHRK FVEAVSQIGI DSAVPKKILK IMNVEGLTRE NVASHLQKYR IYLKKLGDGT LTNSNSFADE TEALWRNMNV PSFIGSPSSS NHFAKMNSSS
301: TIGAQTLLPT QSIHATSSHK NLGIPRLDME TVGHGVNLPK DVMPMPVQDI SRFVSSGKSY GPVSSDGLPG VSHCFPSGPS GNSFGNVSND VPLKARKPFS
401: IDISGSSFAN SSKDSPPLTS NMCFSLSRSC SSYASILRGK ILGSSRGIPF EDIANGEMLA PGHLPLQSPE LVNQHLVQPQ SCSASLVNKV AREVPQFAGP
501: SNSWKVDVPS RFTNPGHNVG TSEDPSQGNI LKINQLSRHA HSSGQVPTFG NEYQKKITGD MGKAIPVVGF REQVAPFNYG NFSDGNDTHS TLTPIGNSAL
601: ASSSSMRLNQ IDNSAMLTQV LNGGGASDSL HEGSTINQQA VNDQVNNINE FLMGTSEEQN VETDDLDDFL ANLVNQDFID NGDSFIDGDW GFAP

Best Arabidopsis Sequence Match ( AT1G67710.1 )
(BLAST)

001: MEKSGFSPVG LRVLVVDDDP TWLKILEKML KKCSYEVTTC GLAREALRLL RERKDGYDIV ISDVNMPDMD GFKLLEHVGL ELDLPVIMMS VDGETSRVMK
101: GVQHGACDYL LKPIRMKELK IIWQHVLRKK LQEVRDIEGC GYEGGADWIT RYDEAHFLGG GEDVSFGKKR KDFDFEKKLL QDESDPSSSS SKKARVVWSF
201: ELHHKFVNAV NQIGCDHKAG PKKILDLMNV PWLTRENVAS HLQKYRLYLS RLEKGKELKC YSGGVKNADS SPKDVEVNSG YQSPGRSSYV FSGGNSLIQK
301: ATEIDPKPLA SASLSDLNTD VIMPPKTKKT RIGFDPPISS SAFDSLLPWN DVPEVLESKP VLYENSFLQQ QPLPSQSSYV ANSAPSLMEE EMKPPYETPA
401: GGSSVNADEF LMPQDKIPTV TLQDLDPSAM KLQEFNTEAI LRSLNWELPE SHHSVSLDTD LDLTWLQGER FLANTGLQFQ DYSSSPSLLS ELPAHLNWYG
501: NERLPDPDEY SFMVDQGLFI S

Arabidopsis Description

ARR11Two-component response regulator [Source:UniProtKB/TrEMBL;Acc:Q0WRT0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.