CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH16193	Soybean	nucleus	25.0	13.37
OQU78916	Sorghum	nucleus	66.67	13.07
KRH33116	Soybean	cytosol	33.33	12.63
KXG20364	Sorghum	nucleus	72.22	11.68
KXG20361	Sorghum	nucleus	70.37	11.33
EES09342	Sorghum	nucleus	69.44	10.81
GSMUA_Achr10P...	Banana	nucleus	37.04	9.22
CDY02794	Canola	nucleus	36.11	8.18
EES04061	Sorghum	nucleus	41.67	7.77
EES06387	Sorghum	nucleus	44.44	7.61
Solyc07g005140.2.1	Tomato	nucleus	46.3	7.52
EES07684	Sorghum	nucleus	45.37	7.26
KXG19480	Sorghum	nucleus	44.44	7.14
Bra020390.1-P	Field mustard	nucleus	40.74	7.06
CDY32725	Canola	nucleus	40.74	7.06
KRH20086	Soybean	nucleus	44.44	7.06
KRH03086	Soybean	nucleus	44.44	7.05
CDY02793	Canola	nucleus	40.74	7.03
AT5G58080.1	Thale cress	nucleus	40.74	6.93
PGSC0003DMT400020233	Potato	nucleus	44.44	6.79
Solyc12g010330.1.1	Tomato	nucleus	44.44	6.78
KXG38401	Sorghum	nucleus	21.3	6.63
PGSC0003DMT400008290	Potato	nucleus	46.3	6.47
OQU92974	Sorghum	nucleus	40.74	6.41
OQU76785	Sorghum	nucleus	28.7	5.72
KXG33682	Sorghum	mitochondrion, nucleus	5.56	2.19
EER90120	Sorghum	nucleus	3.7	0.73

Protein Annotations

Gene3D:3.40.50.2300	MapMan:35.1	UniProt:A0A194YK55	InterPro:CheY-like_superfamily	GO:GO:0000160	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987
InterPro:IPR001789	EnsemblPlants:KXG20365	ProteinID:KXG20365	ProteinID:KXG20365.1	PFAM:PF00072	PFscan:PS50110
PANTHER:PTHR43874	PANTHER:PTHR43874:SF7	EnsemblPlantsGene:SORBI_3010G192300	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI0007F241BB

Description

hypothetical protein

Coordinates

chr10:+:53428519..53428941

Molecular Weight (calculated)

12298.5 Da

IEP (calculated)

5.005

GRAVY (calculated)

0.439

Length

108 amino acids

Sequence
(BLAST)

001: MATDTFPIGL SVLAVEDDCV CCKVLERKLK YYNYNAIMVM NAQMVLDMLR ERKDGNWFDL VISNVIIPNM DGFNLLKLIG LEMDLPVTTK ALGQTHFPIF
101: MHGILLIM

Best Arabidopsis Sequence Match ( AT2G25180.1 )
(BLAST)

001: MTVEQNLEAL DQFPVGMRVL AVDDDQTCLK ILESLLRHCQ YHVTTTNQAQ KALELLRENK NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI

Arabidopsis Description

ARR12Two-component response regulator ARR12 [Source:UniProtKB/Swiss-Prot;Acc:P62598]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.