Factsheet for TraesCS7D01G500600.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G511300.1	Wheat	nucleus	94.05	94.05
TraesCS7A01G511100.1	Wheat	nucleus	93.87	93.87
TraesCS7B01G422100.1	Wheat	nucleus	91.07	91.07
TraesCS7D01G499700.1	Wheat	cytosol	15.24	81.31
HORVU7Hr1G114450.2	Barley	nucleus	69.18	66.39
TraesCS7D01G489600.1	Wheat	nucleus	52.71	59.96
TraesCS7D01G525900.1	Wheat	nucleus	56.57	55.79
TraesCS7D01G499600.1	Wheat	nucleus	48.34	55.65
KRH16193	Soybean	nucleus	13.31	37.62
KRH33116	Soybean	cytosol	18.04	36.14
GSMUA_Achr10P...	Banana	nucleus	21.37	28.11
TraesCS6D01G135500.3	Wheat	nucleus	30.82	27.29
Solyc07g005140.2.1	Tomato	nucleus	30.65	26.32
TraesCS7D01G148000.1	Wheat	nucleus	26.09	24.79
CDY02794	Canola	nucleus	20.67	24.74
PGSC0003DMT400020233	Potato	nucleus	30.3	24.47
KRH03086	Soybean	nucleus	28.55	23.94
Solyc12g010330.1.1	Tomato	nucleus	29.6	23.87
TraesCS7D01G148200.1	Wheat	nucleus	27.32	23.67
TraesCS6D01G342200.1	Wheat	nucleus	26.8	22.67
PGSC0003DMT400008290	Potato	nucleus	30.65	22.64
KRH20086	Soybean	nucleus	26.8	22.5
TraesCS3D01G384500.2	Wheat	nucleus	23.47	21.51
AT5G58080.1	Thale cress	nucleus	23.82	21.42
Bra020390.1-P	Field mustard	nucleus	23.29	21.35
CDY32725	Canola	nucleus	23.29	21.35
CDY02793	Canola	nucleus	23.12	21.09
TraesCS3D01G355500.1	Wheat	nucleus, plastid	8.23	20.7
TraesCS4D01G239900.1	Wheat	nucleus	23.99	20.03
TraesCS3D01G531900.1	Wheat	nucleus	8.06	16.37
TraesCS1D01G257700.1	Wheat	nucleus	8.58	15.86

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	InterPro:CheY-like_superfamily	GO:GO:0000160
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:Homeobox-like_sf	InterPro:IPR001789	InterPro:Myb_dom_plants	PFAM:PF00072	PIRSF:PIRSF036392	PFscan:PS50110
PANTHER:PTHR43874	PANTHER:PTHR43874:SF7	InterPro:Response_reg_B-typ_pln	SMART:SM00448	SUPFAM:SSF46689	SUPFAM:SSF52172
InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	EnsemblPlantsGene:TraesCS7D01G500600	EnsemblPlants:TraesCS7D01G500600.1	TIGR:cd00156	SEG:seg

Description

No Description!

Coordinates

chr7D:+:606699935..606704246

Molecular Weight (calculated)

63870.7 Da

IEP (calculated)

6.360

GRAVY (calculated)

-0.515

Length

571 amino acids

Sequence
(BLAST)

001: MATMGGDRRQ MMEDAAEDKF PEGLRVLVVD DDRVCLMVLE ALLRCCKYQP TTVMDGKTAL RMLMAGKQQF DLVITDVRMP DMDGFKLLEL IRLEMDLPVI
101: MLSVDCDKKV VMKGIDHGAS DFMVKPVRTH ELKNIWQHVQ RWRNPKAISH INDHDNDVQR VQPATTDKSK YSGNKRNDGD DSSENNEGTH ISAIHRKPRM
201: TWTIALHNKF LEAINQIGLD RAVPKKVLEL MNVDYLSREN IASHLQKYRL HLKRVKSNPS GDAYERWTSS YNMNNKGNFM HNHEHGRWSV SCGDTASWIT
301: NKYGSTGHLA PPVNIQSNFY MGSYLHDGRM PKYVGKLPSD ARRFTGFVDP PVSLYDNIPN EIMSDEFPSF NHSNSCADIM RGKIMEISKG KTPSILQSSF
401: ANTTVGGGRS LVASQVNFPH SNQLESFAMS SGRLPLQNEK APFISNTTSV GGYIEQMAPF NMASNISSVG TMLNGSSALD ASRTSTNDTH LVNGERTTSM
501: LHNLQTDDFV SLTQLHDGGD GASIVPMQEG TLNQQPLNDH LNEINAFSMD DILSNMHMED FTGDDASVEE A

Best Arabidopsis Sequence Match ( AT2G25180.1 )
(BLAST)

001: MTVEQNLEAL DQFPVGMRVL AVDDDQTCLK ILESLLRHCQ YHVTTTNQAQ KALELLRENK NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI

Arabidopsis Description

ARR12Two-component response regulator ARR12 [Source:UniProtKB/Swiss-Prot;Acc:P62598]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.