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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • plastid 4
  • nucleus 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G394200.1 Wheat nucleus, plastid 96.04 96.89
TraesCS3A01G361800.1 Wheat nucleus, plastid 93.83 94.67
HORVU3Hr1G086000.1 Barley nucleus 91.19 90.79
Os01t0844900-01 Rice nucleus 53.3 55.25
KXG33682 Sorghum mitochondrion, nucleus 57.27 47.45
Zm00001d042892_P001 Maize nucleus 51.1 38.16
TraesCS3D01G531900.1 Wheat nucleus 35.68 28.83
TraesCS1D01G257700.1 Wheat nucleus 34.36 25.24
TraesCS7D01G148000.1 Wheat nucleus 25.11 9.48
TraesCS4D01G239900.1 Wheat nucleus 27.75 9.21
TraesCS7D01G489600.1 Wheat nucleus 20.26 9.16
TraesCS7D01G499600.1 Wheat nucleus 19.82 9.07
TraesCS6D01G342200.1 Wheat nucleus 26.43 8.89
TraesCS7D01G148200.1 Wheat nucleus 25.55 8.8
TraesCS6D01G135500.3 Wheat nucleus 24.23 8.53
TraesCS3D01G384500.2 Wheat nucleus 22.91 8.35
TraesCS7D01G500600.1 Wheat nucleus 20.7 8.23
TraesCS7D01G525900.1 Wheat nucleus 20.26 7.94
TraesCS7D01G499700.1 Wheat cytosol 1.76 3.74
Protein Annotations
EnsemblPlants:TraesCS3D01G355500.1EnsemblPlantsGene:TraesCS3D01G355500Gene3D:1.10.10.60GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0005488InterPro:Homeobox-like_sfInterPro:IPR017930InterPro:Myb_domInterPro:Myb_dom_plantsInterPro:SANT/Myb
PANTHER:PTHR31442PANTHER:PTHR31442:SF10PFAM:PF00249PFscan:PS51294SEG:segSUPFAM:SSF46689
TIGRFAMs:TIGR01557MapMan:35.1::::
Description
No Description!
Coordinates
chr3D:+:467318441..467319124
Molecular Weight (calculated)
24428.6 Da
IEP (calculated)
6.235
GRAVY (calculated)
-0.541
Length
227 amino acids
Sequence
(BLAST)
001: MLSPRVVRPQ PHDGAASAGS SSSRRHMVDR VSEWELGLPS AAELTPVSQP LIPPALAAAF GIGPADALSS PVDAGFLHDS PTSHLTLRFD EYDEEDEEEG
101: EGETDDAAAP GGRRGGGGGG KKARMVWTPE LHHRFVEAVE HLGEKGAVPK AIVRLMNVDG LTRENVASHL QKYRLYLKRS SPGAAAPAPP PPPFFPRFDV
201: QRPHQDSANR SGYCAYPYVS YQKLGCD
Best Arabidopsis Sequence Match ( AT5G59570.1 )
(BLAST)
001: MGKEVMVSDY GDDDGEDAGG GDEYRIPEWE IGLPNGDDLT PLSQYLVPSI LALAFSMIPE RSRTIHDVNR ASQITLSSLR SSTNASSVME EVVDRVESSV
101: PGSDPKKQKK SDGGEAAAVE DSTAEEGDSG PEDASGKTSK RPRLVWTPQL HKRFVDVVAH LGIKNAVPKT IMQLMNVEGL TRENVASHLQ KYRLYLKRIQ
201: GLTTEEDPYS SSDQLFSSTP VPPQSFQDGG GSNGKLGVPV PVPSMVPIPG YGNQMGMQGY YQQYSNHGNE SNQYMMQQNK FGTMVTYPSV GGGDVNDK
Arabidopsis Description
BOATranscription factor BOA [Source:UniProtKB/Swiss-Prot;Acc:Q9LTH4]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.