Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G086000.1 | Barley | nucleus | 57.08 | 54.82 |
| TraesCS3B01G394200.1 | Wheat | nucleus, plastid | 55.25 | 53.78 |
| TraesCS3D01G355500.1 | Wheat | nucleus, plastid | 55.25 | 53.3 |
| TraesCS3A01G361800.1 | Wheat | nucleus, plastid | 54.34 | 52.89 |
| KXG33682 | Sorghum | mitochondrion, nucleus | 61.19 | 48.91 |
| Zm00001d042892_P001 | Maize | nucleus | 51.6 | 37.17 |
| Os01t0971800-00 | Rice | nucleus | 38.36 | 35.29 |
| Os05t0412000-00 | Rice | nucleus | 38.36 | 20.34 |
| Os10t0463400-01 | Rice | nucleus | 20.55 | 13.2 |
| Os03t0224200-01 | Rice | nucleus | 28.31 | 8.97 |
| Os02t0182100-01 | Rice | nucleus | 24.66 | 8.63 |
| Os06t0183100-01 | Rice | nucleus | 27.4 | 8.62 |
| Os01t0904700-01 | Rice | nucleus | 22.83 | 8.59 |
| Os02t0796500-01 | Rice | nucleus | 26.03 | 8.28 |
| Os06t0647200-02 | Rice | nucleus | 22.37 | 7.1 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:35.1 | ProteinID:BAF06697.1 | ProteinID:BAS75192.1 | ProteinID:EEE55658.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom |
| InterPro:Myb_dom_plants | EnsemblPlantsGene:Os01g0844900 | EnsemblPlants:Os01t0844900-01 | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR31442 |
| PANTHER:PTHR31442:SF10 | UniProt:Q0JHT1 | InterPro:SANT/Myb | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI0000DD8DE7 |
| SEG:seg | : | : | : | : | : |
Description
Homeodomain-like containing protein. (Os01t0844900-01)
Coordinates
chr1:+:36287282..36289641
Molecular Weight (calculated)
22737.8 Da
IEP (calculated)
4.906
GRAVY (calculated)
-0.317
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDAAAASGD ACGRVTEWET GLPAPGEMTP VSHQLVPPAL AAAFGIDLAA VGVLLPSPSV DSPVSHLFFP VDEDDDEDEE GEGEGGNDDA PAAAAAGGGG
101: GRCGKKARMV WTPELHHRFV EAVAHLGEKG AVPKAIVRLM NVDGLTRENV ASHLQKYRLY LKRTRVAATP PPSPPPPPPP PPPLPPAMYV PCFAAKPPLD
201: AANRSDSPPS RTSDATTKQ
101: GRCGKKARMV WTPELHHRFV EAVAHLGEKG AVPKAIVRLM NVDGLTRENV ASHLQKYRLY LKRTRVAATP PPSPPPPPPP PPPLPPAMYV PCFAAKPPLD
201: AANRSDSPPS RTSDATTKQ
001: MGKEVMVSDY GDDDGEDAGG GDEYRIPEWE IGLPNGDDLT PLSQYLVPSI LALAFSMIPE RSRTIHDVNR ASQITLSSLR SSTNASSVME EVVDRVESSV
101: PGSDPKKQKK SDGGEAAAVE DSTAEEGDSG PEDASGKTSK RPRLVWTPQL HKRFVDVVAH LGIKNAVPKT IMQLMNVEGL TRENVASHLQ KYRLYLKRIQ
201: GLTTEEDPYS SSDQLFSSTP VPPQSFQDGG GSNGKLGVPV PVPSMVPIPG YGNQMGMQGY YQQYSNHGNE SNQYMMQQNK FGTMVTYPSV GGGDVNDK
101: PGSDPKKQKK SDGGEAAAVE DSTAEEGDSG PEDASGKTSK RPRLVWTPQL HKRFVDVVAH LGIKNAVPKT IMQLMNVEGL TRENVASHLQ KYRLYLKRIQ
201: GLTTEEDPYS SSDQLFSSTP VPPQSFQDGG GSNGKLGVPV PVPSMVPIPG YGNQMGMQGY YQQYSNHGNE SNQYMMQQNK FGTMVTYPSV GGGDVNDK
Arabidopsis Description
BOATranscription factor BOA [Source:UniProtKB/Swiss-Prot;Acc:Q9LTH4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.