Factsheet for Os01t0904700-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G423600.1	Wheat	nucleus	81.1	80.82
TraesCS3A01G391600.1	Wheat	nucleus	80.76	80.48
EES04061	Sorghum	nucleus	78.01	78.41
TraesCS3D01G384500.2	Wheat	nucleus	81.62	76.24
Zm00001d012128_P001	Maize	nucleus	77.66	74.96
Zm00001d042463_P001	Maize	nucleus	76.46	72.36
GSMUA_Achr3P14630_001	Banana	cytosol	42.61	67.95
GSMUA_Achr8P32070_001	Banana	nucleus	49.83	53.21
KRG97483	Soybean	nucleus	39.69	50.77
CDY01838	Canola	nucleus	39.69	46.2
CDX96070	Canola	nucleus	40.55	46.0
Bra004076.1-P	Field mustard	nucleus	39.86	45.58
CDY07410	Canola	nucleus	39.86	45.58
Bra004245.1-P	Field mustard	nucleus	39.86	45.31
CDY28869	Canola	nucleus	39.18	44.97
VIT_17s0000g10100.t01	Wine grape	nucleus	43.47	44.39
AT1G67710.1	Thale cress	nucleus	39.52	44.15
VIT_01s0010g02230.t01	Wine grape	nucleus	45.02	44.11
KRH31403	Soybean	nucleus	44.67	43.05
VIT_17s0000g10110.t01	Wine grape	nucleus	31.44	40.49
PGSC0003DMT400031260	Potato	nucleus	40.03	40.17
Solyc05g014260.2.1	Tomato	nucleus	39.86	39.93
KRH42619	Soybean	nucleus	34.71	39.61
KRH58726	Soybean	endoplasmic reticulum, extracellular	42.96	39.37
Os02t0182100-01	Rice	nucleus	28.87	26.84
Os06t0183100-01	Rice	nucleus	28.69	23.99
Os03t0224200-01	Rice	nucleus	28.18	23.73
Os02t0796500-01	Rice	nucleus	28.01	23.69
Os10t0463400-01	Rice	nucleus	13.75	23.46
Os01t0844900-01	Rice	nucleus	8.59	22.83
Os01t0971800-00	Rice	nucleus	8.93	21.85
Os06t0647200-02	Rice	nucleus	24.74	20.87
Os05t0412000-00	Rice	nucleus	10.65	15.01

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	EntrezGene:4325022	ProteinID:BAD82798.1
ProteinID:BAF07039.2	ProteinID:BAS75781.1	InterPro:CheY-like_superfamily	ProteinID:EEE55842.1	ProteinID:FAA00259.1	GO:GO:0000160
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009653	GO:GO:0009719	GO:GO:0009735	GO:GO:0009736	GO:GO:0009987	GO:GO:0010082
GO:GO:0040007	InterPro:Homeobox-like_sf	InterPro:IPR001789	InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants
EnsemblPlantsGene:Os01g0904700	EnsemblPlants:Os01t0904700-01	PFAM:PF00072	PFAM:PF00249	PIRSF:PIRSF036392	PFscan:PS50110
PFscan:PS51294	PANTHER:PTHR31442	PANTHER:PTHR31442:SF17	UniProt:Q5N6V8	InterPro:Response_reg_B-typ_pln	InterPro:SANT/Myb
SMART:SM00448	SUPFAM:SSF46689	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI0000ED9077
RefSeq:XP_015622017.1	SEG:seg	:	:	:	:

Description

B-TYPE RESPONSE REGULATOR 6B-type response regulator, Cytokinin signaling (Os01t0904700-01)

Coordinates

chr1:-:39387278..39391014

Molecular Weight (calculated)

64817.1 Da

IEP (calculated)

4.845

GRAVY (calculated)

-0.426

Length

582 amino acids

Sequence
(BLAST)

001: MDATAFPYGL RVLVVDDDPT WLKILEKMLR KCSYEVTTCG LARVALDILR ERKNKFDIVI SDVNMPDMDG FKLLEHIGLE MDLPVIMMSI DGETSRVMKG
101: VQHGACDYLL KPVRMKELRN IWQHVYRKKM HEVKEIEGND SCDDLQILRN SFEGLDEKSL FMRSDSDTMR KRKDVDKDHA DQESSDGNTV KKARVVWSVD
201: LHQKFVNAVN QIGFDKVGPK KILDLMNVPG LTRENVASHL QKYRLYLSRL QKQNEERILG AARQDFSHKG TSENLNLRSS FQEQPSNIAN GYPHASQNIQ
301: TQANMLDSQL EDTKSTVPLP VPDKKRTLAS DAADSQNVTS ASSLGGVLSF KSMPVNQDRK PSETMILECQ AWTGGIPSKQ FMQYPKHNHE RCDLLGDYSC
401: LPKPDLEHPV GPSNLYAPPP LISMSCGMEG DARDFSDVKP AIMDCIKSLS PALTCTVDSV SVQLSDSVVT SIDGDLKSSG VDGLPSIKDC CLDQTNSQGS
501: LRPSQEPSII GSTELASLPE DLPSYPLHGV SLENIGLSSI DLLNYSDAMI LSGLQSNWYD DLEFSSEMMD YPSIDECLFA SS

Best Arabidopsis Sequence Match ( AT1G67710.1 )
(BLAST)

001: MEKSGFSPVG LRVLVVDDDP TWLKILEKML KKCSYEVTTC GLAREALRLL RERKDGYDIV ISDVNMPDMD GFKLLEHVGL ELDLPVIMMS VDGETSRVMK
101: GVQHGACDYL LKPIRMKELK IIWQHVLRKK LQEVRDIEGC GYEGGADWIT RYDEAHFLGG GEDVSFGKKR KDFDFEKKLL QDESDPSSSS SKKARVVWSF
201: ELHHKFVNAV NQIGCDHKAG PKKILDLMNV PWLTRENVAS HLQKYRLYLS RLEKGKELKC YSGGVKNADS SPKDVEVNSG YQSPGRSSYV FSGGNSLIQK
301: ATEIDPKPLA SASLSDLNTD VIMPPKTKKT RIGFDPPISS SAFDSLLPWN DVPEVLESKP VLYENSFLQQ QPLPSQSSYV ANSAPSLMEE EMKPPYETPA
401: GGSSVNADEF LMPQDKIPTV TLQDLDPSAM KLQEFNTEAI LRSLNWELPE SHHSVSLDTD LDLTWLQGER FLANTGLQFQ DYSSSPSLLS ELPAHLNWYG
501: NERLPDPDEY SFMVDQGLFI S

Arabidopsis Description

ARR11Two-component response regulator [Source:UniProtKB/TrEMBL;Acc:Q0WRT0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.