Factsheet for TraesCS3D01G384500.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G423600.1	Wheat	nucleus	93.1	99.32
TraesCS3A01G391600.1	Wheat	nucleus	92.46	98.63
Os01t0904700-01	Rice	nucleus	76.24	81.62
EES04061	Sorghum	nucleus	71.59	77.03
Zm00001d012128_P001	Maize	nucleus	71.43	73.8
Zm00001d042463_P001	Maize	nucleus	70.63	71.54
GSMUA_Achr3P14630_001	Banana	cytosol	40.13	68.49
GSMUA_Achr8P32070_001	Banana	nucleus	44.78	51.19
KRG97483	Soybean	nucleus	36.12	49.45
TraesCS7D01G499700.1	Wheat	cytosol	8.35	48.6
CDX96070	Canola	nucleus	37.4	45.42
CDY01838	Canola	nucleus	36.44	45.4
CDY07410	Canola	nucleus	36.92	45.19
Bra004076.1-P	Field mustard	nucleus	36.92	45.19
CDY28869	Canola	nucleus	36.6	44.97
Bra004245.1-P	Field mustard	nucleus	36.76	44.73
VIT_01s0010g02230.t01	Wine grape	nucleus	42.05	44.11
AT1G67710.1	Thale cress	nucleus	36.28	43.38
VIT_17s0000g10100.t01	Wine grape	nucleus	38.52	42.11
KRH31403	Soybean	nucleus	40.61	41.89
Solyc05g014260.2.1	Tomato	nucleus	38.36	41.14
PGSC0003DMT400031260	Potato	nucleus	38.2	41.03
KRH42619	Soybean	nucleus	31.94	39.02
KRH58726	Soybean	endoplasmic reticulum, extracellular	39.49	38.74
VIT_17s0000g10110.t01	Wine grape	nucleus	28.09	38.72
TraesCS7D01G489600.1	Wheat	nucleus	21.83	27.09
TraesCS7D01G148000.1	Wheat	nucleus	25.68	26.62
TraesCS7D01G499600.1	Wheat	nucleus	21.03	26.41
TraesCS6D01G135500.3	Wheat	nucleus	26.65	25.74
TraesCS7D01G148200.1	Wheat	nucleus	25.68	24.28
TraesCS4D01G239900.1	Wheat	nucleus	26.32	23.98
TraesCS7D01G500600.1	Wheat	nucleus	21.51	23.47
TraesCS7D01G525900.1	Wheat	nucleus	21.67	23.32
TraesCS6D01G342200.1	Wheat	nucleus	25.04	23.11
TraesCS3D01G355500.1	Wheat	nucleus, plastid	8.35	22.91
TraesCS3D01G531900.1	Wheat	nucleus	9.31	20.64
TraesCS1D01G257700.1	Wheat	nucleus	9.63	19.42

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.4.2.4	MapMan:15.5.23	InterPro:CheY-like_superfamily	GO:GO:0000160	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0007154
GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009653
GO:GO:0009719	GO:GO:0009735	GO:GO:0009987	GO:GO:0010082	GO:GO:0040007	InterPro:Homeobox-like_sf
InterPro:IPR001789	InterPro:Myb_dom_plants	PFAM:PF00072	PFAM:PF00249	PIRSF:PIRSF036392	PFscan:PS50110
PANTHER:PTHR31442	PANTHER:PTHR31442:SF17	InterPro:Response_reg_B-typ_pln	InterPro:SANT/Myb	SMART:SM00448	SUPFAM:SSF46689
SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	EnsemblPlantsGene:TraesCS3D01G384500	EnsemblPlants:TraesCS3D01G384500.2	TIGR:cd00156
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3D:+:499984931..499988635

Molecular Weight (calculated)

68800.5 Da

IEP (calculated)

5.760

GRAVY (calculated)

-0.386

Length

623 amino acids

Sequence
(BLAST)

001: MADASAFPYG LRVLVVDDDP TWLKILEKML RKCSYEGSNL RLLSSSGSRS AWRGGYAVAS SPVGVCASVR RLCMSVTTCG LARVALEILR ERKNRFDIVI
101: SDVNMPDMDG FKLLEHIGLE MDLPVIMMSI DGETSRVMKG VQHGACDYLL KPVRMKELRN IWQHVYRKKM HEVKEIEGHD SCDDLQILRY GFEGFDEKGL
201: FMTVDSDATR KRKDVDHGDQ DSSDGATAKK ARVVWSVDLH QKFVNAVNQI GFDKVGPKKI LDLMNVPGLT RENVASHLQK YRLYLGRLQK QNEERILGSA
301: RQDFSTKGPS SENLNLRSSF QEQPSNTSSG YPHASQKIQG QSSVSDSQLE ETKRTVPLPA PDRSMNSVSS AAEPQNVAGV SPIGGVLSFK GLPVNQDRKP
401: SETMILECQA WTGGVPAKQF MQYPKHNHAR CDLLGDYACL PKPDLEHPTA PGHLFTPPPL ISMSCSTEMD ARNFSDVKPA LLDCIKSFSP ALTCTADSVS
501: VQISDSVVTS TDAADRKFSS VEGLPSTKDC YFGQTSNQGS WLRSQEEPSI ICGADFASLP EDLPGYPLQG GVSFENVGLS SIDLFHYNDA MILSGLQSNW
601: YDDQDHFSSE TTDYPLMDGC LFA

Best Arabidopsis Sequence Match ( AT1G67710.1 )
(BLAST)

001: MEKSGFSPVG LRVLVVDDDP TWLKILEKML KKCSYEVTTC GLAREALRLL RERKDGYDIV ISDVNMPDMD GFKLLEHVGL ELDLPVIMMS VDGETSRVMK
101: GVQHGACDYL LKPIRMKELK IIWQHVLRKK LQEVRDIEGC GYEGGADWIT RYDEAHFLGG GEDVSFGKKR KDFDFEKKLL QDESDPSSSS SKKARVVWSF
201: ELHHKFVNAV NQIGCDHKAG PKKILDLMNV PWLTRENVAS HLQKYRLYLS RLEKGKELKC YSGGVKNADS SPKDVEVNSG YQSPGRSSYV FSGGNSLIQK
301: ATEIDPKPLA SASLSDLNTD VIMPPKTKKT RIGFDPPISS SAFDSLLPWN DVPEVLESKP VLYENSFLQQ QPLPSQSSYV ANSAPSLMEE EMKPPYETPA
401: GGSSVNADEF LMPQDKIPTV TLQDLDPSAM KLQEFNTEAI LRSLNWELPE SHHSVSLDTD LDLTWLQGER FLANTGLQFQ DYSSSPSLLS ELPAHLNWYG
501: NERLPDPDEY SFMVDQGLFI S

Arabidopsis Description

ARR11Two-component response regulator [Source:UniProtKB/TrEMBL;Acc:Q0WRT0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.