Factsheet for TraesCS3A01G391600.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G423600.1	Wheat	nucleus	97.95	97.95
TraesCS3D01G384500.2	Wheat	nucleus	98.63	92.46
Os01t0904700-01	Rice	nucleus	80.48	80.76
EES04061	Sorghum	nucleus	75.86	76.51
Zm00001d012128_P001	Maize	nucleus	75.0	72.64
Zm00001d042463_P001	Maize	nucleus	74.49	70.73
GSMUA_Achr3P14630_001	Banana	cytosol	42.47	67.95
TraesCS7A01G510400.1	Wheat	cytosol	7.53	52.38
GSMUA_Achr8P32070_001	Banana	nucleus	47.26	50.64
KRG97483	Soybean	nucleus	38.53	49.45
TraesCS7A01G539700.1	Wheat	cytosol, nucleus, plastid	9.25	48.65
CDX96070	Canola	nucleus	39.9	45.42
CDY01838	Canola	nucleus	38.87	45.4
Bra004076.1-P	Field mustard	nucleus	39.38	45.19
CDY07410	Canola	nucleus	39.38	45.19
CDY28869	Canola	nucleus	39.04	44.97
Bra004245.1-P	Field mustard	nucleus	39.21	44.73
VIT_01s0010g02230.t01	Wine grape	nucleus	44.86	44.11
AT1G67710.1	Thale cress	nucleus	38.7	43.38
VIT_17s0000g10100.t01	Wine grape	nucleus	41.1	42.11
KRH31403	Soybean	nucleus	43.32	41.89
Solyc05g014260.2.1	Tomato	nucleus	40.92	41.14
PGSC0003DMT400031260	Potato	nucleus	40.75	41.03
KRH42619	Soybean	nucleus	34.08	39.02
KRH58726	Soybean	endoplasmic reticulum, extracellular	42.12	38.74
VIT_17s0000g10110.t01	Wine grape	nucleus	29.97	38.72
TraesCS7A01G146500.1	Wheat	nucleus	27.05	26.12
TraesCS6A01G146200.3	Wheat	nucleus	28.42	25.94
TraesCS7A01G510300.1	Wheat	nucleus	21.92	25.65
TraesCS7A01G146400.1	Wheat	nucleus	26.71	25.41
TraesCS7A01G146700.1	Wheat	nucleus	27.57	24.43
TraesCS7A01G502300.1	Wheat	nucleus	23.63	24.34
TraesCS4A01G063100.1	Wheat	nucleus	27.74	23.68
TraesCS7A01G511300.1	Wheat	nucleus	22.43	22.94
TraesCS6A01G359200.1	Wheat	nucleus	26.54	22.93
TraesCS7A01G511100.1	Wheat	nucleus	22.26	22.77
TraesCS3A01G361800.1	Wheat	nucleus, plastid	8.73	22.67
TraesCS3A01G473600.1	Wheat	nucleus	22.09	22.59
TraesCS3A01G526600.1	Wheat	nucleus	9.93	20.35
TraesCS1A01G258400.1	Wheat	nucleus	10.62	19.87
TraesCS3A01G473800.1	Wheat	nucleus	18.84	19.5
TraesCS7A01G539600.1	Wheat	nucleus	5.65	9.76

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	InterPro:CheY-like_superfamily	GO:GO:0000160
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139
GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009653	GO:GO:0009719	GO:GO:0009735	GO:GO:0009987	GO:GO:0010082	GO:GO:0040007
InterPro:Homeobox-like_sf	InterPro:IPR001789	InterPro:Myb_dom_plants	PFAM:PF00072	PFAM:PF00249	PIRSF:PIRSF036392
PFscan:PS50110	PANTHER:PTHR31442	PANTHER:PTHR31442:SF17	InterPro:Response_reg_B-typ_pln	InterPro:SANT/Myb	SMART:SM00448
SUPFAM:SSF46689	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	EnsemblPlantsGene:TraesCS3A01G391600	EnsemblPlants:TraesCS3A01G391600.1
TIGR:cd00156	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3A:+:639479317..639482977

Molecular Weight (calculated)

64914.0 Da

IEP (calculated)

5.280

GRAVY (calculated)

-0.438

Length

584 amino acids

Sequence
(BLAST)

001: MADASAFPYG LRVLVVDDDP TWLKILEKML RKCSYEVTTC GLARVALEIL RERKNRFDIV ISDVNMPDMD GFKLLEHIGL EMDLPVIMMS IDGETSRVMK
101: GVQHGACDYL LKPVRMKELR NIWQHVYRKK MHEVKEIEGH DSCDDLQILR YGFEGFDEKG LFMTVDSDPT RKRKDMDHGD QDSSDGATAK KARVVWSVDL
201: HQKFVNAVNQ IGFDKVGPKK ILDLMNVPGL TRENVASHLQ KYRLYLGRLQ KQNEERILGS GRQDFSTKGP SSENLNLRSS FQEQPSNTSS GYPHASQKIQ
301: GQSSLSDSQL EETKRTVPLP APDRSMNSVS SAAEPQNVAG VSPIGGVLSF KGLPVNQDRK PSETMILECQ AWTGGVPAKQ FMQYPKHNHA RCDLLGDYAC
401: LPKPDLEHPT APGHLFTPPP LISMSCSTEM DARNFSDVKP ALLDCIKSFS PALTCTADSV SVQISDSVVT ATNAADRKFS SVEGLPSTKD CYFGQTSNQG
501: SWLRSQEEPN IICGADFASL PEDLPGYPLQ GGLSFENVGL SSIDLFHYND AMILSGLQSN WYDDQDHFSS ETTDYPLMDG CLFA

Best Arabidopsis Sequence Match ( AT1G67710.1 )
(BLAST)

001: MEKSGFSPVG LRVLVVDDDP TWLKILEKML KKCSYEVTTC GLAREALRLL RERKDGYDIV ISDVNMPDMD GFKLLEHVGL ELDLPVIMMS VDGETSRVMK
101: GVQHGACDYL LKPIRMKELK IIWQHVLRKK LQEVRDIEGC GYEGGADWIT RYDEAHFLGG GEDVSFGKKR KDFDFEKKLL QDESDPSSSS SKKARVVWSF
201: ELHHKFVNAV NQIGCDHKAG PKKILDLMNV PWLTRENVAS HLQKYRLYLS RLEKGKELKC YSGGVKNADS SPKDVEVNSG YQSPGRSSYV FSGGNSLIQK
301: ATEIDPKPLA SASLSDLNTD VIMPPKTKKT RIGFDPPISS SAFDSLLPWN DVPEVLESKP VLYENSFLQQ QPLPSQSSYV ANSAPSLMEE EMKPPYETPA
401: GGSSVNADEF LMPQDKIPTV TLQDLDPSAM KLQEFNTEAI LRSLNWELPE SHHSVSLDTD LDLTWLQGER FLANTGLQFQ DYSSSPSLLS ELPAHLNWYG
501: NERLPDPDEY SFMVDQGLFI S

Arabidopsis Description

ARR11Two-component response regulator [Source:UniProtKB/TrEMBL;Acc:Q0WRT0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.