Factsheet for TraesCS7A01G510300.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G510400.1	Wheat	cytosol	15.43	91.67
TraesCS7D01G499600.1	Wheat	nucleus	89.58	90.12
TraesCS7B01G420800.1	Wheat	cytosol	18.64	86.92
TraesCS7B01G420900.1	Wheat	nucleus	81.56	82.22
TraesCS7A01G539700.1	Wheat	cytosol, nucleus, plastid	16.23	72.97
TraesCS7A01G502300.1	Wheat	nucleus	58.72	51.68
TraesCS3A01G473600.1	Wheat	nucleus	55.91	48.86
TraesCS7A01G511300.1	Wheat	nucleus	55.11	48.16
TraesCS7A01G511100.1	Wheat	nucleus	54.91	47.99
HORVU7Hr1G112890.1	Barley	nucleus	60.12	44.44
TraesCS3A01G473800.1	Wheat	nucleus	50.1	44.33
HORVU7Hr1G112840.1	Barley	nucleus	56.91	43.49
KRH16193	Soybean	nucleus	15.43	38.12
TraesCS7A01G539600.1	Wheat	nucleus	25.65	37.87
KRH33116	Soybean	cytosol	20.64	36.14
GSMUA_Achr10P...	Banana	nucleus	22.44	25.81
TraesCS7A01G146500.1	Wheat	nucleus	30.06	24.79
TraesCS6A01G146200.3	Wheat	nucleus	31.26	24.38
TraesCS7A01G146400.1	Wheat	nucleus	29.86	24.27
Solyc07g005140.2.1	Tomato	nucleus	32.06	24.06
CDY02794	Canola	nucleus	22.44	23.48
PGSC0003DMT400020233	Potato	nucleus	33.07	23.34
Solyc12g010330.1.1	Tomato	nucleus	32.26	22.74
TraesCS7A01G146700.1	Wheat	nucleus	29.86	22.61
TraesCS3A01G391600.1	Wheat	nucleus	25.65	21.92
TraesCS6A01G359200.1	Wheat	nucleus	29.46	21.75
KRH03086	Soybean	nucleus	29.66	21.73
KRH20086	Soybean	nucleus	29.26	21.47
PGSC0003DMT400008290	Potato	nucleus	32.67	21.09
AT5G58080.1	Thale cress	nucleus	25.25	19.84
CDY32725	Canola	nucleus	24.25	19.42
Bra020390.1-P	Field mustard	nucleus	24.25	19.42
CDY02793	Canola	nucleus	24.25	19.33
TraesCS3A01G361800.1	Wheat	nucleus, plastid	8.62	19.11
TraesCS4A01G063100.1	Wheat	nucleus	25.65	18.71
TraesCS1A01G258400.1	Wheat	nucleus	9.82	15.71
TraesCS3A01G526600.1	Wheat	nucleus	8.82	15.44

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	InterPro:CheY-like_superfamily	GO:GO:0000160
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR001789	InterPro:Myb_dom_plants	PFAM:PF00072
PFscan:PS50110	PANTHER:PTHR43874	PANTHER:PTHR43874:SF7	SMART:SM00448	SUPFAM:SSF46689	SUPFAM:SSF52172
InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	EnsemblPlantsGene:TraesCS7A01G510300	EnsemblPlants:TraesCS7A01G510300.1	TIGR:cd00156	SEG:seg

Description

No Description!

Coordinates

chr7A:+:697823636..697827478

Molecular Weight (calculated)

54935.3 Da

IEP (calculated)

5.771

GRAVY (calculated)

-0.401

Length

499 amino acids

Sequence
(BLAST)

001: MAAMGGDQRQ MMEGAAEDKF PDGLRVLAVD DDCVCLKVLD NLLHGCKYHP TTVTDAKTAL KILRAGKEKF DVVITDVRMQ DMDSFKLLEL IRLEMDLPVI
101: MLSEDCDKTA VTKGINHGAC DYLVKPVHTN ELKNIWQHVE RKRKSEAIRH ISGDDDDDQR AQLGTAAKSN DGANNDENKE NTQASTTQKK PKVGWTIELH
201: TKFMEAINQI GLYRATPKKI LEMMNVDFLT RQNVSSHLQK YKLYLKRVNP NPLGDACVRW NSFMNTQESF MQNHEHESWS VSSGGIASWS PNHYGEAGHL
301: GQHTNTQSSM SMGSLINGGR MPVYSVQQTP YMGRFFGFNE HIVPFIIPGN PSSILMLNAN DSVPMAPPQF VYSDPITTLV AGFGEHMAPL NIESNMGSVG
401: MMLNGRSAHG TGRTSVAETD MVNYGRTSSA LSNHQTDGFV PLTQMHDVGD ASGILHVQEG TMDQQALGGQ LNGINALSSV GISNLLNEDF IGEEAVMDG

Best Arabidopsis Sequence Match ( AT2G25180.1 )
(BLAST)

001: MTVEQNLEAL DQFPVGMRVL AVDDDQTCLK ILESLLRHCQ YHVTTTNQAQ KALELLRENK NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI

Arabidopsis Description

ARR12Two-component response regulator ARR12 [Source:UniProtKB/Swiss-Prot;Acc:P62598]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.