Factsheet for HORVU7Hr1G112840.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G112890.1	Barley	nucleus	92.8	89.78
HORVU7Hr1G112860.2	Barley	cytosol	26.03	80.95
TraesCS7B01G420800.1	Wheat	cytosol	12.25	74.77
TraesCS7A01G510400.1	Wheat	cytosol	9.04	70.24
HORVU7Hr1G114130.2	Barley	nucleus	47.93	63.88
TraesCS7A01G510300.1	Wheat	nucleus	43.49	56.91
TraesCS7B01G420900.1	Wheat	nucleus	42.57	56.16
HORVU7Hr1G114450.2	Barley	nucleus	51.0	55.97
TraesCS7D01G499600.1	Wheat	nucleus	42.42	55.85
HORVU7Hr1G112830.1	Barley	cytosol, nucleus	13.32	51.18
HORVU7Hr1G118290.2	Barley	nucleus	45.94	49.75
KRH16193	Soybean	nucleus	10.87	35.15
KRH33116	Soybean	cytosol	14.85	34.04
HORVU6Hr1G028680.1	Barley	nucleus	26.03	27.29
CDY02794	Canola	nucleus	18.53	25.37
Solyc07g005140.2.1	Tomato	nucleus	25.73	25.26
GSMUA_Achr10P...	Banana	nucleus	16.54	24.88
PGSC0003DMT400020233	Potato	nucleus	26.34	24.33
Solyc12g010330.1.1	Tomato	nucleus	26.03	24.01
HORVU7Hr1G030050.1	Barley	nucleus	21.75	22.68
KRH03086	Soybean	nucleus	22.97	22.03
PGSC0003DMT400008290	Potato	nucleus	26.03	21.99
HORVU6Hr1G085560.5	Barley	nucleus	22.82	21.75
KRH20086	Soybean	nucleus	22.05	21.18
AT5G58080.1	Thale cress	nucleus	20.06	20.63
Bra020390.1-P	Field mustard	nucleus	19.45	20.39
CDY32725	Canola	nucleus	19.45	20.39
CDY02793	Canola	nucleus	19.3	20.13
HORVU7Hr1G030000.4	Barley	nucleus	22.36	19.65
HORVU3Hr1G086000.1	Barley	nucleus	6.58	18.86
HORVU4Hr1G066480.1	Barley	nucleus	18.53	17.69
HORVU3Hr1G114970.1	Barley	nucleus	6.43	15.33
HORVU1Hr1G064950.1	Barley	nucleus	7.04	15.08

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	InterPro:CheY-like_superfamily	GO:GO:0000160
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU7Hr1G112840
EnsemblPlants:HORVU7Hr1G112840.1	InterPro:Homeobox-like_sf	InterPro:IPR001789	UniProt:M0Z6R5	InterPro:Myb_dom_plants	PFAM:PF00072
PFAM:PF00249	PFscan:PS50110	PANTHER:PTHR43874	PANTHER:PTHR43874:SF7	InterPro:SANT/Myb	SMART:SM00448
SUPFAM:SSF46689	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI0002961F18	:

Description

No Description!

Coordinates

chrchr7H:+:635873223..635877512

Molecular Weight (calculated)

72408.7 Da

IEP (calculated)

7.392

GRAVY (calculated)

-0.566

Length

653 amino acids

Sequence
(BLAST)

001: MGAMEGDQRQ MMEDATVDKF SEGLRVLAVD DNCVCLKVLE ALMRRCKYHP TVAMDAKTVL KILRAGKVQF DLVITDVRMP DMDGFKLLDL IVLEMDLPVI
101: MLSVDCDKKV VLKAINHGAC DYLVKPVCTN DLKNIWQHVE SRRRSQAISH MSRDNADNQR VHPGNLGSCK DSKNKRNDEY DSNKDKESTH SSTTQKKPRV
201: AWTTELHNKF LEAINQIGLE EASPNKILEL TNVDYLTRNN IASHLQNHRL YLNRGNPNSS GDASERQNSS MNKQRNFMHE HEHERWHVSS GGNPYWNPNY
301: FGATSQLGQL TNKQSNLCMG SLIDGGRLSR YFLPHTRDSR RFADSDDPPI GVDNGILDGI MLDEFSSYNS GTSYVDSMCG KLMKTSKGES PSNLRSYFTN
401: TSNGGGMSAL ANEYQVEPLK SINKYHTHMN EPSTHVVHTV GKPSKFPGFA GTYNNPRWSS MTAIHHRSGT SHVPPRVNIP RINQLTSYKT SSSKMLLQNK
501: MPSFIGNTTS MAGLTEQIVP FNIPTNSRSV GMLNGHNSAP MEPSQMVNGG SIITLPIILN DQISPFNIAN NTTLVGTMMN DNSALGTGRT SMTDINTVNS
601: GRTISTHSNL QTAGFSELTQ MLDDGDADGI LPVQGSMVNQ QDHNDLLNGT SAF

Best Arabidopsis Sequence Match ( AT2G25180.1 )
(BLAST)

001: MTVEQNLEAL DQFPVGMRVL AVDDDQTCLK ILESLLRHCQ YHVTTTNQAQ KALELLRENK NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI

Arabidopsis Description

ARR12Two-component response regulator ARR12 [Source:UniProtKB/Swiss-Prot;Acc:P62598]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.