Factsheet for TraesCS7B01G420900.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G420800.1	Wheat	cytosol	19.39	89.72
TraesCS7D01G499600.1	Wheat	nucleus	81.82	81.65
TraesCS7A01G510300.1	Wheat	nucleus	82.22	81.56
TraesCS7A01G510400.1	Wheat	cytosol	13.74	80.95
TraesCS7B01G408600.1	Wheat	cytosol	21.62	78.68
TraesCS7B01G421000.1	Wheat	cytosol	16.97	78.5
TraesCS7B01G461400.1	Wheat	nucleus	33.33	65.22
TraesCS7B01G408700.1	Wheat	nucleus	66.26	52.06
TraesCS7B01G422000.1	Wheat	nucleus	54.14	47.6
TraesCS3B01G517000.1	Wheat	nucleus	54.75	47.46
TraesCS7B01G422100.1	Wheat	nucleus	53.13	46.06
HORVU7Hr1G112890.1	Barley	nucleus	58.59	42.96
HORVU7Hr1G112840.1	Barley	nucleus	56.16	42.57
KRH33116	Soybean	cytosol	21.41	37.19
KRH16193	Soybean	nucleus	14.95	36.63
TraesCS7B01G461300.1	Wheat	nucleus, plastid	21.01	31.42
TraesCS6B01G174400.1	Wheat	nucleus	32.12	25.56
GSMUA_Achr10P...	Banana	nucleus	21.62	24.65
CDY02794	Canola	nucleus	22.42	23.27
TraesCS7B01G049000.1	Wheat	nucleus	28.69	22.76
PGSC0003DMT400020233	Potato	nucleus	31.72	22.21
TraesCS6B01G392000.1	Wheat	nucleus	30.1	22.11
Solyc07g005140.2.1	Tomato	nucleus	29.7	22.11
TraesCS7B01G049200.1	Wheat	nucleus	29.29	22.07
Solyc12g010330.1.1	Tomato	nucleus	31.11	21.75
TraesCS3B01G423600.1	Wheat	nucleus	25.66	21.75
KRH03086	Soybean	nucleus	29.7	21.59
KRH20086	Soybean	nucleus	28.89	21.03
CDY32725	Canola	nucleus	24.44	19.42
Bra020390.1-P	Field mustard	nucleus	24.44	19.42
PGSC0003DMT400008290	Potato	nucleus	30.3	19.4
AT5G58080.1	Thale cress	nucleus	24.85	19.37
CDY02793	Canola	nucleus	24.44	19.33
TraesCS3B01G394200.1	Wheat	nucleus, plastid	8.48	18.67
TraesCS4B01G240100.1	Wheat	nucleus	24.65	17.84
TraesCS1B01G268900.1	Wheat	nucleus	9.29	14.94
TraesCS3B01G594300.1	Wheat	nucleus	8.28	14.29

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	InterPro:CheY-like_superfamily	GO:GO:0000160
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR001789	InterPro:Myb_dom_plants	PFAM:PF00072
PFscan:PS50110	PANTHER:PTHR43874	PANTHER:PTHR43874:SF7	SMART:SM00448	SUPFAM:SSF46689	SUPFAM:SSF52172
InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	EnsemblPlantsGene:TraesCS7B01G420900	EnsemblPlants:TraesCS7B01G420900.1	TIGR:cd00156	SEG:seg

Description

No Description!

Coordinates

chr7B:+:690094354..690098221

Molecular Weight (calculated)

54814.6 Da

IEP (calculated)

6.604

GRAVY (calculated)

-0.378

Length

495 amino acids

Sequence
(BLAST)

001: MAAMGGDQRQ MMEDAAEDKF PEGLRVLAVD DDRVCLKVLE NLLRGCKYHT TTVKDATTAL KILRAGKEKF DLVITNVRMQ DMDSLKLLER IRLEMDLPVI
101: MLSEGCEKKA MMKGINHGAC DYLLKPVHTN ELKNIWQHVE SRRNSEAIRH ISRDDDDDQR SQLGTATKNN DGANTDESKE STHASSTQKK PKVAWTIELR
201: TKFMEAINQI GLYRATPKKI LELMNVDYLT RKNVLIHLQK YKLYLKKVNS NPLGDACVRW NSFMNIWESF MHNHEHERWG VSSGGSASWS PNHYGAAVHL
301: GQHTSTEGSM SMGSLISGGT MLGYLVPQTP TMGIFSGLNE HIVPFNIPSN PRSIGMLNAN INVPMAAPQF VYSDPITTVV AGFSEKMAPF NIASKMGSVG
401: MMLNGKYAPG TGRISVAETE MVNYGRTSSA LSNHQTYDFV PLTHMHDVGD ASGIFHVQEG TVDQQAPSSQ LNGINDLSSV GINEDFIGED AVMDG

Best Arabidopsis Sequence Match ( AT2G25180.1 )
(BLAST)

001: MTVEQNLEAL DQFPVGMRVL AVDDDQTCLK ILESLLRHCQ YHVTTTNQAQ KALELLRENK NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI

Arabidopsis Description

ARR12Two-component response regulator ARR12 [Source:UniProtKB/Swiss-Prot;Acc:P62598]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.