Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G030050.1 | Barley | nucleus | 69.18 | 82.11 |
| GSMUA_AchrUn_... | Banana | nucleus | 24.5 | 68.42 |
| HORVU6Hr1G085560.5 | Barley | nucleus | 46.16 | 50.07 |
| HORVU7Hr1G112860.2 | Barley | cytosol | 12.38 | 43.81 |
| HORVU7Hr1G112830.1 | Barley | cytosol, nucleus | 9.42 | 41.18 |
| Solyc07g005140.2.1 | Tomato | nucleus | 31.36 | 35.04 |
| HORVU6Hr1G028680.1 | Barley | nucleus | 28.8 | 34.35 |
| PGSC0003DMT400020233 | Potato | nucleus | 32.17 | 33.8 |
| Solyc12g010330.1.1 | Tomato | nucleus | 31.63 | 33.19 |
| PGSC0003DMT400008290 | Potato | nucleus | 31.49 | 30.27 |
| HORVU7Hr1G114130.2 | Barley | nucleus | 18.98 | 28.78 |
| HORVU4Hr1G066480.1 | Barley | nucleus | 23.42 | 25.44 |
| HORVU3Hr1G086000.1 | Barley | nucleus | 7.67 | 25.0 |
| HORVU7Hr1G114450.2 | Barley | nucleus | 19.92 | 24.87 |
| HORVU7Hr1G118290.2 | Barley | nucleus | 18.98 | 23.38 |
| HORVU7Hr1G112890.1 | Barley | nucleus | 20.86 | 22.96 |
| HORVU3Hr1G114970.1 | Barley | nucleus | 8.34 | 22.63 |
| HORVU7Hr1G112840.1 | Barley | nucleus | 19.65 | 22.36 |
| HORVU1Hr1G064950.1 | Barley | nucleus | 8.88 | 21.64 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:11.4.2.4 | MapMan:15.5.23 | Gene3D:3.40.50.2300 | UniProt:A0A287VWA9 | InterPro:CheY-like_superfamily |
| GO:GO:0000160 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:HORVU7Hr1G030000 | EnsemblPlants:HORVU7Hr1G030000.4 | InterPro:Homeobox-like_sf | InterPro:IPR001789 | InterPro:IPR017930 |
| InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00072 | PIRSF:PIRSF036392 | PFscan:PS50110 | PFscan:PS51294 |
| PANTHER:PTHR43874 | PANTHER:PTHR43874:SF37 | InterPro:Response_reg_B-typ_pln | SMART:SM00448 | SUPFAM:SSF46689 | SUPFAM:SSF52172 |
| InterPro:Sig_transdc_resp-reg_receiver | TIGRFAMs:TIGR01557 | UniParc:UPI000B484940 | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr7H:-:57898341..57903524
Molecular Weight (calculated)
81826.5 Da
IEP (calculated)
7.170
GRAVY (calculated)
-0.446
Length
743 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLDGMMMEA RKGLMERDQF PVGMRVLAVD DDPVCLRVLE VLLRRCQYHV TTTNQAATAL RLLRENKDMF DLVISDVHMP DMDGFKLLEL VGLEMDLPVI
101: MLSVNGETRS VLKGITHGAC DYLLKPVRIE ELRNVWQHVV RRKFSNREPN NLDFCKEISK PPSADSYHRL GQATCDRSSD QNGRPSKKRK ELHSEEEDEG
201: EENDDAAASR KPRVVWSIEL HRKFVAAVNQ LGIDKAVPKR ILELMNVGKL TRENVASHLQ QKYRLYLRRL SAVASQQASI AAAFGGRDPF LHMGAFEGLH
301: SYHQPFAPSA ALPSFNPHGL LIGAGATAFE LQNFAASKAI QCASSNGAIG HCAGDTNKLN IVSLQGNQQT DLMQGLTASS LGPPQLQQKW IHQEPNDLCS
401: IFSGGALANT MFGTLQRVTG SSLPLEDLLE CTPHIKVGAH PSIGIQAVSP GLLERSVGVS ADLRDSSMSQ QGDLSISDGF SVDKLPLHIP FDDADTGFMA
501: REQVMDQEGI FSERMTVSVC PSESLIAANN IKCGASSSGS TMLLPPHETE RHSKYLQFGS GSNSRHRMGG LRQDQCLDNG GFSYDGGAIV PEQTNMDDLG
601: TPKLQGGLNS SSCNFDDLLN SIIKVGEPTC HDDTPPLATS FPVSCFIRQS PQTEQAISGL QREPSLQGMP QEDDRLRSQR PHQISHRSGR VKARGRMEHL
701: HDHHRPKRRS PPEGWRPPTS RAFTPLSTSL KAPSRRSTRC GCW
101: MLSVNGETRS VLKGITHGAC DYLLKPVRIE ELRNVWQHVV RRKFSNREPN NLDFCKEISK PPSADSYHRL GQATCDRSSD QNGRPSKKRK ELHSEEEDEG
201: EENDDAAASR KPRVVWSIEL HRKFVAAVNQ LGIDKAVPKR ILELMNVGKL TRENVASHLQ QKYRLYLRRL SAVASQQASI AAAFGGRDPF LHMGAFEGLH
301: SYHQPFAPSA ALPSFNPHGL LIGAGATAFE LQNFAASKAI QCASSNGAIG HCAGDTNKLN IVSLQGNQQT DLMQGLTASS LGPPQLQQKW IHQEPNDLCS
401: IFSGGALANT MFGTLQRVTG SSLPLEDLLE CTPHIKVGAH PSIGIQAVSP GLLERSVGVS ADLRDSSMSQ QGDLSISDGF SVDKLPLHIP FDDADTGFMA
501: REQVMDQEGI FSERMTVSVC PSESLIAANN IKCGASSSGS TMLLPPHETE RHSKYLQFGS GSNSRHRMGG LRQDQCLDNG GFSYDGGAIV PEQTNMDDLG
601: TPKLQGGLNS SSCNFDDLLN SIIKVGEPTC HDDTPPLATS FPVSCFIRQS PQTEQAISGL QREPSLQGMP QEDDRLRSQR PHQISHRSGR VKARGRMEHL
701: HDHHRPKRRS PPEGWRPPTS RAFTPLSTSL KAPSRRSTRC GCW
001: MTVEQNLEAL DQFPVGMRVL AVDDDQTCLK ILESLLRHCQ YHVTTTNQAQ KALELLRENK NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI
Arabidopsis Description
ARR12Two-component response regulator ARR12 [Source:UniProtKB/Swiss-Prot;Acc:P62598]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.