Factsheet for HORVU4Hr1G066480.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G239900.1	Wheat	nucleus	96.34	96.34
TraesCS4B01G240100.1	Wheat	nucleus	96.34	96.34
TraesCS4A01G063100.1	Wheat	nucleus	96.34	96.34
Os03t0224200-01	Rice	nucleus	84.65	83.79
OQU92974	Sorghum	nucleus	79.39	79.15
Zm00001d048046_P001	Maize	nucleus	77.49	77.26
Zm00001d028265_P002	Maize	nucleus	77.49	75.71
CDY64566	Canola	nucleus	27.92	50.8
GSMUA_Achr1P22230_001	Banana	nucleus	53.36	50.48
Bra026635.1-P	Field mustard	nucleus	27.78	50.4
CDY09419	Canola	nucleus	27.78	50.4
GSMUA_Achr8P30850_001	Banana	nucleus	50.88	48.33
AT2G01760.2	Thale cress	nucleus	28.51	47.56
CDY68249	Canola	nucleus	27.92	43.71
KRH70359	Soybean	nucleus	39.62	42.81
VIT_01s0011g05830.t01	Wine grape	nucleus	43.71	42.78
KRH49669	Soybean	nucleus	39.04	42.18
PGSC0003DMT400075907	Potato	nucleus	38.74	40.58
Solyc04g008050.2.1	Tomato	nucleus	38.6	40.37
HORVU7Hr1G112860.2	Barley	cytosol	11.55	37.62
HORVU7Hr1G112830.1	Barley	cytosol, nucleus	7.75	31.18
HORVU6Hr1G028680.1	Barley	nucleus	27.05	29.7
HORVU6Hr1G085560.5	Barley	nucleus	28.07	28.03
HORVU3Hr1G086000.1	Barley	nucleus	9.06	27.19
HORVU7Hr1G114130.2	Barley	nucleus	18.86	26.33
HORVU7Hr1G030050.1	Barley	nucleus	22.95	25.08
HORVU3Hr1G114970.1	Barley	nucleus	9.94	24.82
HORVU7Hr1G114450.2	Barley	nucleus	20.61	23.7
HORVU7Hr1G030000.4	Barley	nucleus	25.44	23.42
HORVU1Hr1G064950.1	Barley	nucleus	10.23	22.95
HORVU7Hr1G118290.2	Barley	nucleus	18.71	21.23
HORVU7Hr1G112840.1	Barley	nucleus	17.69	18.53
HORVU7Hr1G112890.1	Barley	nucleus	18.13	18.37

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	UniProt:A0A287PF79	InterPro:CheY-like_superfamily
GO:GO:0000160	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	EnsemblPlantsGene:HORVU4Hr1G066480	EnsemblPlants:HORVU4Hr1G066480.1	InterPro:Homeobox-like_sf	InterPro:IPR001789	InterPro:IPR017930
InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00072	PFAM:PF00249	PIRSF:PIRSF036392	PFscan:PS50110
PFscan:PS51294	PANTHER:PTHR43874	PANTHER:PTHR43874:SF32	InterPro:Response_reg_B-typ_pln	InterPro:SANT/Myb	SMART:SM00448
SUPFAM:SSF46689	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI000B47B919	SEG:seg

Description

Two-component response regulator [Source:UniProtKB/TrEMBL;Acc:A0A287PF79]

Coordinates

chrchr4H:+:553940815..553947677

Molecular Weight (calculated)

73633.0 Da

IEP (calculated)

6.659

GRAVY (calculated)

-0.451

Length

684 amino acids

Sequence
(BLAST)

001: MAPPEEAGGG DQFPVGMKVL VVDDDQTCLA VLKRMLIQCR YDATTCSQAT RALAMLRENR GAFDVIISDV HMPDMNGFRL LELVGLEMDL PVIMMSADSR
101: TDLVMKGIKH GACDYLIKPV RMEELKNIWQ HVVRKKFGGN KEHEHSGSLD DTDRNRPTNN DNEYASSAND GAEDSWKSQK KKRDKEEDDS ELESGDPSNN
201: SKKPRVVWSV ELHQQFVNAV NHLGIDKAVP KKILELMNVP GLTRENVASH LQKFRLYLKR IAQHHAGMGN PYGVPASSAQ VASLGGLDFQ ALAASGQIPP
301: QALAALQDEL LGRPTNNLVL PGRDQSSLRL AAVKGNKPHG EQIAFGQPIY KVQNNSYAAL PQNSPAVGRM PSFSAWPNNK LGMADSMSAL GNVNNSQNSN
401: IGLHELQQQP DTMLSGTLHT LDVKPSGIVM PSQSLNTFPA SEGLSPNQNP LIVPSQSSGY LTGIPPSMKP ELVLPTSQSS NNLLGGIDLI NQASTSQPFI
501: SSHGGNLSGL MNRNSNVIPS QGISNFQTGN TPYLVNQNSM GMGSKPPGVL KTESTDSLNQ SYGYVNHMDS GLLSSQSKNA QFGFLQSPND VTGGWSSLQN
601: MDCFRNTVGP SQPVSSSSSF HSSNAALGKL PDQGRGKNLG FVGKGTCIPN RFAVDEIESP TNSLSHSIGS SGDIPDMFGF SGQM

Best Arabidopsis Sequence Match ( AT3G16857.1 )
(BLAST)

001: MMNPSHGRGL GSAGGSSSGR NQGGGGETVV EMFPSGLRVL VVDDDPTCLM ILERMLRTCL YEVTKCNRAE MALSLLRKNK HGFDIVISDV HMPDMDGFKL
101: LEHVGLEMDL PVIMMSADDS KSVVLKGVTH GAVDYLIKPV RMEALKNIWQ HVVRKRRSEW SVPEHSGSIE ETGERQQQQH RGGGGGAAVS GGEDAVDDNS
201: SSVNEGNNWR SSSRKRKDEE GEEQGDDKDE DASNLKKPRV VWSVELHQQF VAAVNQLGVE KAVPKKILEL MNVPGLTREN VASHLQKYRI YLRRLGGVSQ
301: HQGNLNNSFM TGQDASFGPL STLNGFDLQA LAVTGQLPAQ SLAQLQAAGL GRPAMVSKSG LPVSSIVDER SIFSFDNTKT RFGEGLGHHG QQPQQQPQMN
401: LLHGVPTGLQ QQLPMGNRMS IQQQIAAVRA GNSVQNNGML MPLAGQQSLP RGPPPMLTSS QSSIRQPMLS NRISERSGFS GRNNIPESSR VLPTSYTNLT
501: TQHSSSSMPY NNFQPELPVN SFPLASAPGI SVPVRKATSY QEEVNSSEAG FTTPSYDMFT TRQNDWDLRN IGIAFDSHQD SESAAFSASE AYSSSSMSRH
601: NTTVAATEHG RNHQQPPSGM VQHHQVYADG NGGSVRVKSE RVATDTATMA FHEQYSNQED LMSALLKQV

Arabidopsis Description

ARR1Two-component response regulator ARR1 [Source:UniProtKB/Swiss-Prot;Acc:Q940D0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.