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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra026635.1-P Field mustard nucleus 99.73 99.73
CDY64566 Canola nucleus 98.94 99.2
CDY68249 Canola nucleus 97.88 84.44
AT2G01760.2 Thale cress nucleus 76.39 70.24
CDY52720 Canola nucleus 26.79 54.01
CDY54632 Canola cytosol 20.42 52.03
CDX82391 Canola cytosol 20.16 51.35
CDY54630 Canola cytosol 20.69 50.32
CDX73905 Canola nucleus 12.2 46.0
CDX87845 Canola cytosol, extracellular 11.67 32.84
CDX75892 Canola nucleus 39.26 32.74
CDX73907 Canola nucleus 11.67 32.59
CDY56439 Canola nucleus 22.81 31.27
CDX86245 Canola nucleus 22.55 31.14
CDX92102 Canola nucleus 39.26 29.48
CDX95898 Canola nucleus 38.99 29.11
KRH70359 Soybean nucleus 47.75 28.44
PGSC0003DMT400075907 Potato nucleus 49.07 28.33
Solyc04g008050.2.1 Tomato nucleus 48.81 28.13
VIT_01s0011g05830.t01 Wine grape nucleus 51.99 28.04
TraesCS4D01G239900.1 Wheat nucleus 50.4 27.78
HORVU4Hr1G066480.1 Barley nucleus 50.4 27.78
TraesCS4B01G240100.1 Wheat nucleus 50.4 27.78
TraesCS4A01G063100.1 Wheat nucleus 50.13 27.63
KRH49669 Soybean nucleus 46.15 27.49
OQU92974 Sorghum nucleus 49.6 27.26
Zm00001d048046_P001 Maize nucleus 49.34 27.11
CDY07410 Canola nucleus 36.6 27.11
CDY28869 Canola nucleus 36.34 27.02
Os03t0224200-01 Rice nucleus 49.07 26.77
CDY01838 Canola nucleus 35.01 26.4
Zm00001d028265_P002 Maize nucleus 48.81 26.29
CDX90546 Canola nucleus 41.11 26.27
CDY13465 Canola nucleus 36.07 26.25
GSMUA_Achr1P22230_001 Banana nucleus 49.87 26.0
CDX96070 Canola nucleus 35.28 25.93
CDX72337 Canola nucleus 35.81 25.81
CDY09718 Canola nucleus 40.85 25.62
GSMUA_Achr8P30850_001 Banana nucleus 48.81 25.56
CDX68803 Canola nucleus 34.22 25.24
CDX82389 Canola nucleus 40.32 24.96
CDY02794 Canola nucleus 30.77 24.32
CDY70103 Canola nucleus 37.14 24.26
CDY35371 Canola nucleus 36.87 23.92
CDY33920 Canola nucleus 25.46 22.17
CDX79963 Canola nucleus 14.32 21.86
CDY53674 Canola nucleus 14.32 21.77
CDY05641 Canola nucleus 24.93 21.08
CDY08579 Canola nucleus 13.53 21.07
CDX68392 Canola nucleus 14.59 20.99
CDX80940 Canola nucleus 13.26 20.49
CDY49965 Canola mitochondrion 18.3 20.47
CDX82988 Canola nucleus 14.06 20.46
CDY61256 Canola nucleus 14.85 20.44
CDY52133 Canola nucleus 13.26 20.0
CDY16482 Canola nucleus 23.34 20.0
CDX98816 Canola nucleus 13.79 19.92
CDX77263 Canola nucleus 23.61 19.78
CDX99104 Canola nucleus 15.12 19.66
CDX76652 Canola nucleus 21.75 19.57
CDY02793 Canola nucleus 32.36 19.49
CDY32725 Canola nucleus 32.1 19.42
CDY11437 Canola nucleus 21.22 19.05
CDY00969 Canola nucleus 14.32 19.01
CDY36273 Canola mitochondrion 11.67 18.41
CDY29358 Canola nucleus 23.87 17.82
CDY04335 Canola nucleus 24.67 17.61
CDY32209 Canola nucleus 21.49 17.16
CDY34423 Canola nucleus 21.49 17.05
CDY67763 Canola nucleus 24.93 15.82
CDX98997 Canola nucleus 24.4 15.36
CDX70016 Canola nucleus 24.4 15.33
CDX78284 Canola nucleus 20.42 13.56
CDX81041 Canola nucleus 20.16 13.43
CDY14053 Canola nucleus 25.46 12.83
CDX86925 Canola nucleus 16.71 9.31
CDY30695 Canola nucleus 14.06 7.04
Protein Annotations
Gene3D:1.10.10.60MapMan:11.4.2.4MapMan:15.5.23Gene3D:3.40.50.2300GO:A0A078F8S3UniProt:A0A078F8S3
EnsemblPlants:CDY09419ProteinID:CDY09419ProteinID:CDY09419.1InterPro:CheY-like_superfamilyGO:GO:0000160GO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0007154
GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987EnsemblPlantsGene:GSBRNA2T00030911001
InterPro:Homeobox-like_sfInterPro:IPR001789InterPro:IPR017930InterPro:Myb_domInterPro:Myb_dom_plantsPFAM:PF00072
PFAM:PF00249PIRSF:PIRSF036392PFscan:PS50110PFscan:PS51294PANTHER:PTHR43874PANTHER:PTHR43874:SF32
InterPro:Response_reg_B-typ_plnInterPro:SANT/MybSMART:SM00448SUPFAM:SSF46689SUPFAM:SSF52172InterPro:Sig_transdc_resp-reg_receiver
TIGRFAMs:TIGR01557UniParc:UPI0004EE9CAESEG:seg:::
Description
BnaA02g25910DTwo-component response regulator [Source:UniProtKB/TrEMBL;Acc:A0A078F8S3]
Coordinates
chrLK031995:-:805473..807636
Molecular Weight (calculated)
41552.0 Da
IEP (calculated)
9.382
GRAVY (calculated)
-0.281
Length
377 amino acids
Sequence
(BLAST)
001: MTISDQFPCG LRVLVVDDDA SCLIILEKML LRLMYQVTIC SQADVALTLL RERKGCFDLV LSDVHMPGMN GYKLLQQVGL EMDLPVIMMS VDGRTATVMT
101: GINHGACDYL IKPIRPEELK NIWQHVVRRK CTINKNSISS SSSSLGSLFS VSGVSEGSLK RRKNKRRVDS EEDDLLDPGN SSKKSRVVWS MELHQQFVKA
201: INHLGIEKAV PKRILELMSV PSLSRENVAS HLQKYRLYLK RLSGAASQSR DAESMERYEN IQAMVSSGQI HPQALAALYG RPIDNHMSGG FGVWIPTDNH
301: LGGSNVSSAS NRCFGALDSP SSVAASMSVH GLSSSGNVRQ QGNGFSNNTD YRIRQGNGSG ISEESWILGR PLRQRKA
Best Arabidopsis Sequence Match ( AT2G01760.1 )
(BLAST)
001: MPINDQFPSG LRILVVDDDT SCLFILEKML LRLMYQVTIC SQADVALTIL RERKDSFDLV LSDVHMPGMN GYNLLQQVGL LEMDLPVIMM SVDGRTTTVM
101: TGINHGACDY LIKPIRPEEL KNIWQHVVRR KCVMKKELRS SQALEDNKNS GSLETVVVSV SECSEESLMK CRNKKKKKKR SVDRDDNEDD LLLDPGNSKK
201: SRVVWSIELH QQFVNAVNKL GIDKAVPKRI LELMNVPGLS RENVASHLQK FRLYLKRLSG EASQSNDSES TKRYENIQAL VSSGQLHPQT LAALFGQPID
301: NHHSASFGVW IPNDNLGRSQ NEHFSVDVSS ASNRPVSVAV HGLSSSANFR QRGDVNNNRI RQGYGSNVNE ESWILERSSR QR
Arabidopsis Description
ARR14response regulator 14 [Source:TAIR;Acc:AT2G01760]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.