Factsheet for Zm00001d048046_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU92974	Sorghum	nucleus	93.0	93.0
Zm00001d028265_P002	Maize	nucleus	90.82	89.0
Os03t0224200-01	Rice	nucleus	79.74	79.16
TraesCS4B01G240100.1	Wheat	nucleus	77.26	77.49
HORVU4Hr1G066480.1	Barley	nucleus	77.26	77.49
TraesCS4A01G063100.1	Wheat	nucleus	76.68	76.9
TraesCS4D01G239900.1	Wheat	nucleus	76.53	76.75
Zm00001d036803_P001	Maize	cytosol	7.73	50.0
CDY64566	Canola	nucleus	27.26	49.73
Bra026635.1-P	Field mustard	nucleus	27.11	49.34
CDY09419	Canola	nucleus	27.11	49.34
GSMUA_Achr1P22230_001	Banana	nucleus	51.46	48.82
AT2G01760.2	Thale cress	nucleus	27.99	46.83
GSMUA_Achr8P30850_001	Banana	nucleus	48.83	46.53
CDY68249	Canola	nucleus	27.11	42.56
VIT_01s0011g05830.t01	Wine grape	nucleus	42.86	42.06
KRH70359	Soybean	nucleus	37.76	40.92
PGSC0003DMT400075907	Potato	nucleus	38.19	40.12
KRH49669	Soybean	nucleus	36.88	39.97
Solyc04g008050.2.1	Tomato	nucleus	38.05	39.91
Zm00001d032784_P001	Maize	nucleus	16.76	34.12
Zm00001d015521_P001	Maize	nucleus	26.53	28.84
Zm00001d012128_P001	Maize	nucleus	24.78	28.19
Zm00001d011785_P001	Maize	nucleus	8.75	27.4
Zm00001d045112_P001	Maize	nucleus	26.38	27.06
Zm00001d042463_P001	Maize	nucleus	24.05	26.83
Zm00001d041960_P001	Maize	nucleus	9.48	25.19
Zm00001d018380_P001	Maize	nucleus	22.01	24.51
Zm00001d010280_P001	Maize	nucleus	10.2	23.41
Zm00001d038191_P001	Maize	nucleus	10.35	22.76
Zm00001d036802_P001	Maize	nucleus	12.83	22.68
Zm00001d046755_P001	Maize	nucleus	21.72	22.21
Zm00001d042892_P001	Maize	nucleus	8.75	19.74

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	EntrezGene:541639	ProteinID:AQL08456.1
ProteinID:AQL08457.1	ProteinID:AQL08458.1	EMBL:BT060558	UniProt:C0HE02	InterPro:CheY-like_superfamily	GO:GO:0000160
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EMBL:HQ858678	EMBL:HQ858740	InterPro:Homeobox-like_sf	InterPro:IPR001789	InterPro:IPR017930	InterPro:Myb_dom
InterPro:Myb_dom_plants	PFAM:PF00072	PFAM:PF00249	PIRSF:PIRSF036392	PFscan:PS50110	PFscan:PS51294
PANTHER:PTHR43874	PANTHER:PTHR43874:SF32	InterPro:Response_reg_B-typ_pln	InterPro:SANT/Myb	SMART:SM00448	SUPFAM:SSF46689
SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI0001948788	EnsemblPlantsGene:Zm00001d048046	EnsemblPlants:Zm00001d048046_P001
EnsemblPlants:Zm00001d048046_T001	SEG:seg	:	:	:	:

Description

ARR-B-transcription factor 1Two-component response regulator ARR14

Coordinates

chr9:-:148718695..148724289

Molecular Weight (calculated)

74006.3 Da

IEP (calculated)

6.585

GRAVY (calculated)

-0.435

Length

686 amino acids

Sequence
(BLAST)

001: MAAAKARGGE FPVGMKVLVV DDDPTCLVVL KRMLLECRYD VTTCPQATRA LTMLRENRRG FDVIISDVHM PDMDGFRLLE LVGLEMDLPV IMMSADSRTD
101: IVMNGIKHGA CDYLIKPVRM EELKNIWQHV IRKKFNENKD HEHSGSLDDT DRNRPTNNDN EYASSANDGG DGSWKSQRKK REKEDDETDL ENGDPSSTSK
201: KPRVVWSVEL HQQFVNAVNH LGIDKAVPKK ILELMNVPGL TRENVASHLQ KFRLYLKRIA QHHAGIPHPF VAPVSSANVA PLGGLEFQAL AASGQIPPQA
301: LAALQDELLG RPTSSLALPG RDQSSLRVAA IKGNKHHEER EIAFGQPIYK CQNNAYGAFP QNSPAVGGLQ PFAAWPNNKV GMTDSTSTLG NVGNSQNSNM
401: LLHELQQQPD TLLLGTLHNI DAKPSGVVMP SQSLNTFPAS EGISPNQNPL IIPSQPPSFV SSIPPSMKHE SLLGLPSTST SLLGGLDMVN QASTSQALIS
501: SHGTNLPGLM NRSSNAIPSP GISNFQSGNI HYVVNQNAMG VSSKPPGVLK TESTDSLSCS YGYIGGSTSV DSGLFSSQSK NPQYDLLQNQ NDVNGSWSPS
601: QDFDSFGNSL GQGHPGTTSS NFQSSALGKL PDQGRGRNHG FVGKGTCIPS RFAVDEVESP TNNLSHSIGN SGDIVNPDIF GFSGHM

Best Arabidopsis Sequence Match ( AT2G25180.1 )
(BLAST)

001: MTVEQNLEAL DQFPVGMRVL AVDDDQTCLK ILESLLRHCQ YHVTTTNQAQ KALELLRENK NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI

Arabidopsis Description

ARR12Two-component response regulator ARR12 [Source:UniProtKB/Swiss-Prot;Acc:P62598]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.