Factsheet for Zm00001d045112_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG19480	Sorghum	nucleus	90.58	90.18
GSMUA_AchrUn_...	Banana	nucleus	27.35	68.8
Os06t0183100-01	Rice	nucleus	69.96	67.24
Zm00001d018380_P001	Maize	nucleus	49.18	53.41
Zm00001d036803_P001	Maize	cytosol	8.37	52.83
Zm00001d015521_P001	Maize	nucleus	35.87	38.03
Solyc07g005140.2.1	Tomato	nucleus	36.77	36.99
PGSC0003DMT400020233	Potato	nucleus	37.67	35.64
Solyc12g010330.1.1	Tomato	nucleus	37.22	35.17
Zm00001d032784_P001	Maize	nucleus	16.89	33.53
PGSC0003DMT400008290	Potato	nucleus	37.37	32.34
Zm00001d012128_P001	Maize	nucleus	25.56	28.36
Zm00001d011785_P001	Maize	nucleus	9.27	28.31
Zm00001d048046_P001	Maize	nucleus	27.06	26.38
Zm00001d042463_P001	Maize	nucleus	24.07	26.18
Zm00001d036802_P001	Maize	nucleus	15.1	26.03
Zm00001d028265_P002	Maize	nucleus	27.06	25.86
Zm00001d046755_P001	Maize	nucleus	25.26	25.19
Zm00001d010280_P001	Maize	nucleus	10.91	24.41
Zm00001d038191_P001	Maize	nucleus	11.21	24.04
Zm00001d041960_P001	Maize	nucleus	9.12	23.64
Zm00001d042892_P001	Maize	nucleus	8.52	18.75

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100191412	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	ProteinID:AQL01592.1
InterPro:CheY-like_superfamily	GO:GO:0000160	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009719	GO:GO:0009736	GO:GO:0009987	GO:GO:0043565	GO:GO:0045893
InterPro:Homeobox-like_sf	InterPro:IPR001789	InterPro:IPR017930	UniProt:K7VE33	InterPro:Myb_dom	InterPro:Myb_dom_plants
PFAM:PF00072	PFAM:PF00249	PIRSF:PIRSF036392	PFscan:PS50110	PFscan:PS51294	PANTHER:PTHR43874
PANTHER:PTHR43874:SF37	InterPro:Response_reg_B-typ_pln	InterPro:SANT/Myb	SMART:SM00448	SUPFAM:SSF46689	SUPFAM:SSF52172
InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI000221F144	EnsemblPlantsGene:Zm00001d045112	EnsemblPlants:Zm00001d045112_P001	EnsemblPlants:Zm00001d045112_T001
SEG:seg	:	:	:	:	:

Description

ARR-B-transcription factor 2Putative two-component response regulator family protein

Coordinates

chr9:-:13117991..13122682

Molecular Weight (calculated)

72506.2 Da

IEP (calculated)

6.314

GRAVY (calculated)

-0.311

Length

669 amino acids

Sequence
(BLAST)

001: MLLGAAAARM EEKRVITGRE RDQFPVGMRV LAVDDDPVCL KVLETLLRRC QYHVITTNQA ITALKLLREN RDMFDLVISD VHMPDMDGFK LLELVGLEMD
101: LPVIMLSVNG ETKSVMKGIT HGACDYLLKP VRIEELRNIW QHVVRRKFSK RERSNLDVYK DFNRLPGADP CHSHGHGHGQ TTAGASDQSG RIGRKRKEMH
201: SDEEDDGEEN DFQEGDEPSA AKKPRVVWSI ELHRKFVAAV NQLGIDKAVP KRILELMNVE KLTRENVASH LQKYRLYLKR LSAVASQQAS IVAAFGGRDP
301: FLHMGAFEGL QSYQPFAPCA ALSSFIPHHG SLGRTTAAAF GVPELAPAIT VQAAASNGMI SHCAGDASKF QLSGIQENQQ PNLGQGSATS LGLPQLQQKW
401: IQQETGDLSA VFSGSALANT LSGALQRVAS SPLPPQELLE GVQTKVSAQP PITMASVSSE LVERTVGVSA NLQDSGISPQ GTLPINDGFT ADKLQLQDPF
501: DSNGGTNFSV NMPVCPSGSL TASSNAKGGA SSCSPVLLAP DTGRHSNYLQ FGVAGNSGHD MNDIKQDHLH QGLSTGGFNH DFGTCMTEQT DPNVPYLMPQ
601: MKPNTLSSED KLKQRNIYDL GIPKLHGGFS SSSCNFDGLL NSMIKAEKDD LSFTDSDLGC DFFPLGACI

Best Arabidopsis Sequence Match ( AT2G25180.1 )
(BLAST)

001: MTVEQNLEAL DQFPVGMRVL AVDDDQTCLK ILESLLRHCQ YHVTTTNQAQ KALELLRENK NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI

Arabidopsis Description

ARR12Two-component response regulator ARR12 [Source:UniProtKB/Swiss-Prot;Acc:P62598]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.