Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG19480 | Sorghum | nucleus | 69.25 | 71.73 |
| GSMUA_AchrUn_... | Banana | nucleus | 27.16 | 71.05 |
| Zm00001d045112_P001 | Maize | nucleus | 67.24 | 69.96 |
| Os02t0796500-01 | Rice | nucleus | 60.49 | 61.19 |
| Os02t0182100-01 | Rice | nucleus | 34.63 | 38.5 |
| Solyc07g005140.2.1 | Tomato | nucleus | 36.06 | 37.74 |
| PGSC0003DMT400020233 | Potato | nucleus | 36.93 | 36.35 |
| Solyc12g010330.1.1 | Tomato | nucleus | 36.64 | 36.02 |
| PGSC0003DMT400008290 | Potato | nucleus | 36.21 | 32.6 |
| Os01t0904700-01 | Rice | nucleus | 23.99 | 28.69 |
| Os01t0844900-01 | Rice | nucleus | 8.62 | 27.4 |
| Os03t0224200-01 | Rice | nucleus | 26.15 | 26.34 |
| Os01t0971800-00 | Rice | nucleus | 8.76 | 25.63 |
| Os10t0463400-01 | Rice | nucleus | 12.21 | 24.93 |
| Os06t0647200-02 | Rice | nucleus | 23.85 | 24.06 |
| Os05t0412000-00 | Rice | nucleus | 10.34 | 17.43 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:11.4.2.4 | MapMan:15.5.23 | Gene3D:3.40.50.2300 | EntrezGene:4340320 | EMBL:AK102959 |
| ProteinID:BAD72541.1 | ProteinID:BAF18900.1 | ProteinID:BAS96483.1 | InterPro:CheY-like_superfamily | ProteinID:EEE65213.1 | ProteinID:FAA00255.1 |
| GO:GO:0000160 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009719 | GO:GO:0009736 | GO:GO:0009987 | GO:GO:0043565 | GO:GO:0045893 | InterPro:Homeobox-like_sf |
| InterPro:IPR001789 | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants | EnsemblPlantsGene:Os06g0183100 | EnsemblPlants:Os06t0183100-01 |
| PFAM:PF00072 | PFAM:PF00249 | PIRSF:PIRSF036392 | PFscan:PS50110 | PFscan:PS51294 | PANTHER:PTHR43874 |
| PANTHER:PTHR43874:SF37 | UniProt:Q5SML5 | InterPro:Response_reg_B-typ_pln | InterPro:SANT/Myb | SMART:SM00448 | SUPFAM:SSF46689 |
| SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | TIGRFAMs:TIGR01557 | UniParc:UPI000046D520 | RefSeq:XP_015640894.1 | SEG:seg |
Description
B-TYPE RESPONSE REGULATOR 2B-type response regulator, Cytokinin signaling (Os06t0183100-01);B-type response regulator, Cytokinin signaling (Os06t0183100-02)
Coordinates
chr6:+:4137248..4142530
Molecular Weight (calculated)
75954.0 Da
IEP (calculated)
6.423
GRAVY (calculated)
-0.406
Length
696 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLGALRMEE RKGLMGRERD QFPVGMRVLA VDDDPVCLKV LETLLRRCQY HVTSTNQAIT ALKLLRENRD MFDLVISDVH MPDMDGFKLL ELVGLEMDLP
101: VIMLSVNGET KTVMKGITHG ACDYLLKPVR IEELRNIWQH VVRRKFGNRE RNNLDFSKEC NKPQSADTDH GPYQPTCGSS DQNGRSSRKR KELHGEDDDE
201: GDDNDYQEND EPSAAKKPRV VWSVELHRKF VAAVNQLGID KAVPKRILEL MNVEKLTREN VASHLQKYRL YLKRLGAVAS QQASIVAAFG GRDPSFLHIG
301: AFEGLQSYQP FAPSAALPSF NPHGLLTRTS AAAAFGLQEL AAPSSTIQTS TGNVTVGHCL EENQQANLAQ GLTAAIGQPQ LQQNWIHQEG NGLSDVFSGS
401: SLTNTLSSTL QRVPSSSLPP QELLECKQAK VSMPPSIRIP PSSSALLERT LGVSTNLGDS SISQQGALPI DGGFSADRLP LHSSFDGAVA TKLDTSLAAS
501: QREIGQQGKF SVSMLVSPSD NLALAKNAKT GASSSGSTII LPLDTARHSD YLQFGGASNS LQKMDGQKQD HIQSSNIIWS SMPSTQLPSD TQIHNTQNQR
601: LDSGSFNHNI GAHLADQTNA SASILPQMKF DTRISEEKMK QKNTYDLGSS KLQGGFNSSG CNFDGLLNSI IKVEKDDLPF MDNELGCDLF PLGACI
101: VIMLSVNGET KTVMKGITHG ACDYLLKPVR IEELRNIWQH VVRRKFGNRE RNNLDFSKEC NKPQSADTDH GPYQPTCGSS DQNGRSSRKR KELHGEDDDE
201: GDDNDYQEND EPSAAKKPRV VWSVELHRKF VAAVNQLGID KAVPKRILEL MNVEKLTREN VASHLQKYRL YLKRLGAVAS QQASIVAAFG GRDPSFLHIG
301: AFEGLQSYQP FAPSAALPSF NPHGLLTRTS AAAAFGLQEL AAPSSTIQTS TGNVTVGHCL EENQQANLAQ GLTAAIGQPQ LQQNWIHQEG NGLSDVFSGS
401: SLTNTLSSTL QRVPSSSLPP QELLECKQAK VSMPPSIRIP PSSSALLERT LGVSTNLGDS SISQQGALPI DGGFSADRLP LHSSFDGAVA TKLDTSLAAS
501: QREIGQQGKF SVSMLVSPSD NLALAKNAKT GASSSGSTII LPLDTARHSD YLQFGGASNS LQKMDGQKQD HIQSSNIIWS SMPSTQLPSD TQIHNTQNQR
601: LDSGSFNHNI GAHLADQTNA SASILPQMKF DTRISEEKMK QKNTYDLGSS KLQGGFNSSG CNFDGLLNSI IKVEKDDLPF MDNELGCDLF PLGACI
001: MTVEQNLEAL DQFPVGMRVL AVDDDQTCLK ILESLLRHCQ YHVTTTNQAQ KALELLRENK NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI
Arabidopsis Description
ARR12Two-component response regulator ARR12 [Source:UniProtKB/Swiss-Prot;Acc:P62598]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.