Factsheet for Os03t0224200-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G063100.1	Wheat	nucleus	83.94	84.8
HORVU4Hr1G066480.1	Barley	nucleus	83.79	84.65
TraesCS4D01G239900.1	Wheat	nucleus	83.36	84.21
TraesCS4B01G240100.1	Wheat	nucleus	83.21	84.06
OQU92974	Sorghum	nucleus	81.19	81.78
Zm00001d048046_P001	Maize	nucleus	79.16	79.74
Zm00001d028265_P002	Maize	nucleus	79.45	78.43
GSMUA_Achr1P22230_001	Banana	nucleus	52.53	50.21
CDY64566	Canola	nucleus	26.92	49.47
Bra026635.1-P	Field mustard	nucleus	26.77	49.07
CDY09419	Canola	nucleus	26.77	49.07
GSMUA_Achr8P30850_001	Banana	nucleus	50.07	48.06
AT2G01760.2	Thale cress	nucleus	27.64	46.59
VIT_01s0011g05830.t01	Wine grape	nucleus	45.73	45.21
KRH70359	Soybean	nucleus	39.22	42.81
CDY68249	Canola	nucleus	26.92	42.56
KRH49669	Soybean	nucleus	38.06	41.55
PGSC0003DMT400075907	Potato	nucleus	38.93	41.19
Solyc04g008050.2.1	Tomato	nucleus	38.78	40.98
Os02t0182100-01	Rice	nucleus	27.21	30.03
Os02t0796500-01	Rice	nucleus	28.65	28.78
Os01t0844900-01	Rice	nucleus	8.97	28.31
Os01t0904700-01	Rice	nucleus	23.73	28.18
Os01t0971800-00	Rice	nucleus	9.41	27.31
Os06t0183100-01	Rice	nucleus	26.34	26.15
Os10t0463400-01	Rice	nucleus	12.45	25.22
Os06t0647200-02	Rice	nucleus	21.56	21.59
Os05t0412000-00	Rice	nucleus	10.13	16.95

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	EntrezGene:4332111	ProteinID:AAN52739.1
EMBL:AB246780	ProteinID:ABF94725.1	ProteinID:ABF94726.1	ProteinID:ABF94727.1	EMBL:AK111864	EMBL:AK111899
ProteinID:BAF11341.1	ProteinID:BAS83042.1	InterPro:CheY-like_superfamily	ProteinID:EAZ26116.1	ProteinID:FAA00254.1	GO:GO:0000160
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719
GO:GO:0009736	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR001789	InterPro:IPR017930	InterPro:Myb_dom
InterPro:Myb_dom_plants	EnsemblPlantsGene:Os03g0224200	EnsemblPlants:Os03t0224200-01	PFAM:PF00072	PFAM:PF00249	PIRSF:PIRSF036392
PFscan:PS50110	PFscan:PS51294	PANTHER:PTHR43874	PANTHER:PTHR43874:SF32	UniProt:Q8H7S7	InterPro:Response_reg_B-typ_pln
InterPro:SANT/Myb	SMART:SM00448	SUPFAM:SSF46689	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557
UniParc:UPI00000AD2A5	RefSeq:XP_015630577.1	RefSeq:XP_015630578.1	SEG:seg	:	:

Description

B-TYPE RESPONSE REGULATOR 1B-type response regulator, Cytokinin signaling (Os03t0224200-01);B-type response regulator, Cytokinin signaling (Os03t0224200-02);Similar to response regulator 8. (Os03t0224200-03)

Coordinates

chr3:+:6512771..6518511

Molecular Weight (calculated)

73811.3 Da

IEP (calculated)

6.511

GRAVY (calculated)

-0.399

Length

691 amino acids

Sequence
(BLAST)

001: MAPVEDGGGV EFPVGMKVLV VDDDPTCLAV LKRMLLECRY DATTCSQATR ALTMLRENRR GFDVIISDVH MPDMDGFRLL ELVGLEMDLP VIMMSADSRT
101: DIVMKGIKHG ACDYLIKPVR MEELKNIWQH VIRKKFNENK EHEHSGSLDD TDRTRPTNND NEYASSANDG AEGSWKSQKK KRDKDDDDGE LESGDPSSTS
201: KKPRVVWSVE LHQQFVNAVN HLGIDKAVPK KILELMNVPG LTRENVASHL QKFRLYLKRI AQHHAGIANP FCPPASSGKV GSLGGLDFQA LAASGQIPPQ
301: ALAALQDELL GRPTNSLVLP GRDQSSLRLA AVKGNKPHGE REIAFGQPIY KCQNNAYGAF PQSSPAVGGM PSFSAWPNNK LGMADSTGTL GGMSNSQNSN
401: IVLHELQQQP DAMLSGTLHS LDVKPSGIVM PSQSLNTFSA SEGLSPNQNT LMIPAQSSGF LAAMPPSMKH EPVLATSQPS SSLLGGIDLV NQASTSQPLI
501: SAHGGGNLSG LVNRNPNVVP SQGISTFHTP NNPYLVSPNS MGMGSKQPPG VLKTENSDAL NHSYGYLGGS NPPMDSGLLS SQSKNTQFGL LGQDDITGSW
601: SPLPNVDSYG NTVGLSHPGS SSSSFQSSNV ALGKLPDQGR GKNHGFVGKG TCIPSRFAVD EIESPTNNLS HSIGSSGDIM SPDIFGFSGQ M

Best Arabidopsis Sequence Match ( AT3G16857.1 )
(BLAST)

001: MMNPSHGRGL GSAGGSSSGR NQGGGGETVV EMFPSGLRVL VVDDDPTCLM ILERMLRTCL YEVTKCNRAE MALSLLRKNK HGFDIVISDV HMPDMDGFKL
101: LEHVGLEMDL PVIMMSADDS KSVVLKGVTH GAVDYLIKPV RMEALKNIWQ HVVRKRRSEW SVPEHSGSIE ETGERQQQQH RGGGGGAAVS GGEDAVDDNS
201: SSVNEGNNWR SSSRKRKDEE GEEQGDDKDE DASNLKKPRV VWSVELHQQF VAAVNQLGVE KAVPKKILEL MNVPGLTREN VASHLQKYRI YLRRLGGVSQ
301: HQGNLNNSFM TGQDASFGPL STLNGFDLQA LAVTGQLPAQ SLAQLQAAGL GRPAMVSKSG LPVSSIVDER SIFSFDNTKT RFGEGLGHHG QQPQQQPQMN
401: LLHGVPTGLQ QQLPMGNRMS IQQQIAAVRA GNSVQNNGML MPLAGQQSLP RGPPPMLTSS QSSIRQPMLS NRISERSGFS GRNNIPESSR VLPTSYTNLT
501: TQHSSSSMPY NNFQPELPVN SFPLASAPGI SVPVRKATSY QEEVNSSEAG FTTPSYDMFT TRQNDWDLRN IGIAFDSHQD SESAAFSASE AYSSSSMSRH
601: NTTVAATEHG RNHQQPPSGM VQHHQVYADG NGGSVRVKSE RVATDTATMA FHEQYSNQED LMSALLKQV

Arabidopsis Description

ARR1Two-component response regulator ARR1 [Source:UniProtKB/Swiss-Prot;Acc:Q940D0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.