Factsheet for Zm00001d046755_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU78916	Sorghum	nucleus	64.38	78.4
Zm00001d036803_P001	Maize	cytosol	12.07	76.42
Zm00001d036802_P001	Maize	nucleus	39.79	68.81
KRH16193	Soybean	nucleus	12.67	42.08
KRH33116	Soybean	cytosol	16.69	39.3
GSMUA_Achr10P...	Banana	nucleus	20.42	31.57
Zm00001d015521_P001	Maize	nucleus	28.46	30.27
CDY02794	Canola	nucleus	21.31	29.98
Zm00001d032784_P001	Maize	nucleus	14.01	27.89
Solyc07g005140.2.1	Tomato	nucleus	26.97	27.22
PGSC0003DMT400020233	Potato	nucleus	28.17	26.73
Solyc12g010330.1.1	Tomato	nucleus	27.72	26.27
Zm00001d045112_P001	Maize	nucleus	25.19	25.26
Zm00001d012128_P001	Maize	nucleus	22.65	25.21
CDY32725	Canola	nucleus	23.25	25.04
Bra020390.1-P	Field mustard	nucleus	23.25	25.04
CDY02793	Canola	nucleus	23.1	24.76
Zm00001d042463_P001	Maize	nucleus	22.21	24.23
AT5G58080.1	Thale cress	nucleus	22.65	23.94
Zm00001d018380_P001	Maize	nucleus	21.91	23.86
KRH03086	Soybean	nucleus	23.99	23.64
KRH20086	Soybean	nucleus	23.7	23.38
PGSC0003DMT400008290	Potato	nucleus	26.83	23.29
Zm00001d048046_P001	Maize	nucleus	22.21	21.72
Zm00001d028265_P002	Maize	nucleus	22.65	21.71
Zm00001d011785_P001	Maize	nucleus	6.71	20.55
Zm00001d010280_P001	Maize	nucleus	8.64	19.4
Zm00001d041960_P001	Maize	nucleus	7.15	18.6
Zm00001d038191_P001	Maize	nucleus	8.2	17.63
Zm00001d042892_P001	Maize	nucleus	7.9	17.43

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:103638799	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	ProteinID:AQL04977.1
InterPro:CheY-like_superfamily	GO:GO:0000160	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR001789	InterPro:IPR017930	UniProt:K7VFP6	InterPro:Myb_dom
InterPro:Myb_dom_plants	PFAM:PF00072	PFscan:PS50110	PFscan:PS51294	PANTHER:PTHR43874	PANTHER:PTHR43874:SF7
SMART:SM00448	SUPFAM:SSF46689	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI00022212F9
EnsemblPlantsGene:Zm00001d046755	EnsemblPlants:Zm00001d046755_P001	EnsemblPlants:Zm00001d046755_T001	SEG:seg	:	:

Description

ARR-B-transcription factor 4Putative two-component response regulator family protein

Coordinates

chr9:-:104439437..104448739

Molecular Weight (calculated)

73472.0 Da

IEP (calculated)

7.565

GRAVY (calculated)

-0.406

Length

671 amino acids

Sequence
(BLAST)

001: MDADTFPVGL RVLAVDDDRV CLKILERQLK CCNYNTTVVT DAQTALDMLR ERKDGNQFDL VISDVVMTKM DGFKLLELIG LEMDLPVIML SANSETQTIM
101: KGIKHGACDY MVKPVRLEQL RGIWTHVVKN SKIDPRNNIG SDSDDVVQKL PSGDGDKGEK VGETRQKKYP KKNKKTVDVA DEDNEKTSAQ KKQRVQWCGE
201: LHQKFVQAVR QIGIDRAVPK KILEIMDVEG LTRENVASHL QKYRIYLRKL GDGTLRSSSP FADETEAFRR NMNVPSFISS SSSSNHFAKM NSSSLIGTET
301: LLPTESVYIM SPQKNLGISR SNMEPVSHGV NLPKDVIPMP VQDISRFISS GKSYAPVWSD GLLGRSQCFP SGPSGSSFAN ISNSVVLNAS KPFSVDISGR
401: SLANGSNDRP PLTSNMCFSS SHSCSSYASI LGGKILGSSR RIPFEDIADG EMLAPGNLPL QSPQLVKQPS SAGLFNEVAR DVHQFAGLSN SWKVAVPPRF
501: SDLGHNVGTS EGHSQGNIFK INRLSRLARS SAQIPTFRNE YQKKTTGIMG KAVPVVGFRE QVAPFSFENN TRSTVTLIGN SALSSSSSTR PGLNINNSAM
601: LTQVLNGGGA NDNLHGVSTV NQQAVNDQVN NEFFMGTNEA HNAESDDLDD FLAYLVNQDF INNGDSFIDR D

Best Arabidopsis Sequence Match ( AT2G25180.1 )
(BLAST)

001: MTVEQNLEAL DQFPVGMRVL AVDDDQTCLK ILESLLRHCQ YHVTTTNQAQ KALELLRENK NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI

Arabidopsis Description

ARR12Two-component response regulator ARR12 [Source:UniProtKB/Swiss-Prot;Acc:P62598]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.