Factsheet for Zm00001d042463_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04061	Sorghum	nucleus	86.18	91.54
Zm00001d012128_P001	Maize	nucleus	85.53	87.23
Os01t0904700-01	Rice	nucleus	72.36	76.46
TraesCS3B01G423600.1	Wheat	nucleus	71.06	74.83
TraesCS3A01G391600.1	Wheat	nucleus	70.73	74.49
TraesCS3D01G384500.2	Wheat	nucleus	71.54	70.63
GSMUA_Achr3P14630_001	Banana	cytosol	38.54	64.93
GSMUA_Achr8P32070_001	Banana	nucleus	43.9	49.54
Zm00001d036803_P001	Maize	cytosol	8.46	49.06
KRG97483	Soybean	nucleus	35.94	48.57
CDX96070	Canola	nucleus	37.89	45.42
CDY01838	Canola	nucleus	36.75	45.2
Bra004245.1-P	Field mustard	nucleus	37.24	44.73
Bra004076.1-P	Field mustard	nucleus	36.42	44.01
CDY07410	Canola	nucleus	36.42	44.01
VIT_01s0010g02230.t01	Wine grape	nucleus	42.11	43.6
CDY28869	Canola	nucleus	35.94	43.59
AT1G67710.1	Thale cress	nucleus	36.59	43.19
VIT_17s0000g10100.t01	Wine grape	nucleus	39.19	42.28
KRH31403	Soybean	nucleus	40.49	41.23
KRH58726	Soybean	endoplasmic reticulum, extracellular	41.14	39.84
KRH42619	Soybean	nucleus	33.01	39.8
PGSC0003DMT400031260	Potato	nucleus	36.59	38.79
Solyc05g014260.2.1	Tomato	nucleus	36.59	38.73
VIT_17s0000g10110.t01	Wine grape	nucleus	28.13	38.27
Zm00001d032784_P001	Maize	nucleus	17.07	31.16
Zm00001d015521_P001	Maize	nucleus	27.48	26.78
Zm00001d045112_P001	Maize	nucleus	26.18	24.07
Zm00001d048046_P001	Maize	nucleus	26.83	24.05
Zm00001d028265_P002	Maize	nucleus	27.15	23.86
Zm00001d046755_P001	Maize	nucleus	24.23	22.21
Zm00001d011785_P001	Maize	nucleus	7.8	21.92
Zm00001d018380_P001	Maize	nucleus	21.95	21.92
Zm00001d036802_P001	Maize	nucleus	13.17	20.88
Zm00001d010280_P001	Maize	nucleus	10.08	20.74
Zm00001d041960_P001	Maize	nucleus	8.46	20.16
Zm00001d038191_P001	Maize	nucleus	9.59	18.91
Zm00001d042892_P001	Maize	nucleus	8.78	17.76

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.4.2.4	MapMan:15.5.23	UniProt:A0A1D6N441	InterPro:CheY-like_superfamily	GO:GO:0000160
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:Homeobox-like_sf	InterPro:IPR001789	InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants	ProteinID:ONM35425.1
PFAM:PF00072	PFAM:PF00249	PIRSF:PIRSF036392	PFscan:PS50110	PFscan:PS51294	PANTHER:PTHR31442
PANTHER:PTHR31442:SF17	InterPro:Response_reg_B-typ_pln	InterPro:SANT/Myb	SMART:SM00448	SUPFAM:SSF46689	SUPFAM:SSF52172
InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI0008459A0C	EnsemblPlantsGene:Zm00001d042463	EnsemblPlants:Zm00001d042463_P001	EnsemblPlants:Zm00001d042463_T001

Description

ARR-B-transcription factor 6Two-component response regulator ARR11

Coordinates

chr3:+:168517515..168521580

Molecular Weight (calculated)

69253.2 Da

IEP (calculated)

4.961

GRAVY (calculated)

-0.424

Length

615 amino acids

Sequence
(BLAST)

001: MALTDATAFP YGLRVLVVDD DPTWLKILEK MLRKCSYEVT TCGLASVAIQ ILRERRNKFD IVISDVNMPD MDGFKLLELI GLEMDLPVIS QYSIPTHVFL
101: QVPFFNIYYQ NTKLLQSVST VMSIDGETSR VMKGVQHGAC DYLLKPVRMK ELRNIWQHVY RKKMHEVKEI EGNDSYDDLQ MFRNGVEGFD ERDLFMRADS
201: DTMRKRKDVN KDHADQDSSD GATVKKARVV WSVDLHQKFV NAVNQIGFDK VGPKKILDLM NVPGLTRENV ASHLQKYRLY LSRLQKQNEE RIMGAARQDF
301: NQKGPSDHLN LRSSFQEQPG NLSNGCQHSS QKVEAQTNIL DPHLDDTKTS MPLKVPDKNG ISASDAVDPH NITTASPLSG VFSFERMPVN QDRKLSETMI
401: LECESWSGSV PPKQFMQYPK HNHERCDLLG DYSCLPKPDL EHPIAPGHLY APPPVISMSY NVEKDVRDFS DVKPDLLGCM KSLSPALTCT VESVSAQLSD
501: SVVTSTNSDR KFSSVEGLSS IKDCDFDQER NGAILFTSEE ASILCGTDFT CLPEDLSGYQ LQGVSFGNKG LNSIDLYQCN DTMLIPGLQN NWYDDDVEFS
601: SETVEFPLLD GGLFA

Best Arabidopsis Sequence Match ( AT1G67710.1 )
(BLAST)

001: MEKSGFSPVG LRVLVVDDDP TWLKILEKML KKCSYEVTTC GLAREALRLL RERKDGYDIV ISDVNMPDMD GFKLLEHVGL ELDLPVIMMS VDGETSRVMK
101: GVQHGACDYL LKPIRMKELK IIWQHVLRKK LQEVRDIEGC GYEGGADWIT RYDEAHFLGG GEDVSFGKKR KDFDFEKKLL QDESDPSSSS SKKARVVWSF
201: ELHHKFVNAV NQIGCDHKAG PKKILDLMNV PWLTRENVAS HLQKYRLYLS RLEKGKELKC YSGGVKNADS SPKDVEVNSG YQSPGRSSYV FSGGNSLIQK
301: ATEIDPKPLA SASLSDLNTD VIMPPKTKKT RIGFDPPISS SAFDSLLPWN DVPEVLESKP VLYENSFLQQ QPLPSQSSYV ANSAPSLMEE EMKPPYETPA
401: GGSSVNADEF LMPQDKIPTV TLQDLDPSAM KLQEFNTEAI LRSLNWELPE SHHSVSLDTD LDLTWLQGER FLANTGLQFQ DYSSSPSLLS ELPAHLNWYG
501: NERLPDPDEY SFMVDQGLFI S

Arabidopsis Description

ARR11Two-component response regulator [Source:UniProtKB/TrEMBL;Acc:Q0WRT0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.