Factsheet for Solyc05g014260.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400031260	Potato	nucleus	91.22	91.38
GSMUA_Achr3P14630_001	Banana	cytosol	35.11	55.89
KRG97483	Soybean	nucleus	40.96	52.31
VIT_01s0010g02230.t01	Wine grape	nucleus	51.12	50.0
Bra004076.1-P	Field mustard	nucleus	43.03	49.12
CDY07410	Canola	nucleus	43.03	49.12
CDY28869	Canola	nucleus	42.69	48.92
CDY01838	Canola	nucleus	41.82	48.6
AT1G67710.1	Thale cress	nucleus	43.37	48.37
CDX96070	Canola	nucleus	42.34	47.95
Bra004245.1-P	Field mustard	nucleus	42.0	47.66
KRH31403	Soybean	nucleus	48.02	46.19
GSMUA_Achr8P32070_001	Banana	nucleus	39.76	42.39
TraesCS3B01G423600.1	Wheat	nucleus	41.31	41.1
TraesCS3A01G391600.1	Wheat	nucleus	41.14	40.92
Os01t0904700-01	Rice	nucleus	39.93	39.86
EES04061	Sorghum	nucleus	39.41	39.55
TraesCS3D01G384500.2	Wheat	nucleus	41.14	38.36
Zm00001d012128_P001	Maize	nucleus	39.07	37.65
Zm00001d042463_P001	Maize	nucleus	38.73	36.59
Solyc05g054390.2.1	Tomato	nucleus	30.46	26.7
Solyc11g072330.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	15.15	26.67
Solyc01g065540.2.1	Tomato	nucleus	30.98	26.59
Solyc07g005140.2.1	Tomato	nucleus	29.43	25.71
Solyc04g008050.2.1	Tomato	nucleus	28.23	25.08
Solyc12g010330.1.1	Tomato	nucleus	29.78	24.43
Solyc03g026250.1.1	Tomato	nucleus	13.6	23.72
Solyc07g019550.1.1	Tomato	nucleus	14.63	23.16
Solyc12g099380.1.1	Tomato	nucleus	21.17	22.16
Solyc10g080960.1.1	Tomato	nucleus	9.64	21.05
Solyc06g005680.2.1	Tomato	nucleus	9.47	20.68
Solyc10g078310.1.1	Tomato	nucleus	9.47	18.97
Solyc06g076350.2.1	Tomato	nucleus	9.98	18.01
Solyc01g091810.1.1	Tomato	nucleus	17.21	17.3

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	InterPro:CheY-like_superfamily	GO:GO:0000160
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009653	GO:GO:0009719	GO:GO:0009735	GO:GO:0009987	GO:GO:0010082	GO:GO:0040007
InterPro:Homeobox-like_sf	InterPro:IPR001789	UniProt:K4BYE6	InterPro:Myb_dom_plants	PFAM:PF00072	PFAM:PF00249
PIRSF:PIRSF036392	PFscan:PS50110	PANTHER:PTHR43874	PANTHER:PTHR43874:SF27	InterPro:Response_reg_B-typ_pln	InterPro:SANT/Myb
SMART:SM00448	SUPFAM:SSF46689	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	EnsemblPlantsGene:Solyc05g014260.2	EnsemblPlants:Solyc05g014260.2.1
TIGRFAMs:TIGR01557	UniParc:UPI00027664BB	:	:	:	:

Description

Two-component response regulator ARR11 [Source:Projected from Arabidopsis thaliana (AT1G67710) UniProtKB/Swiss-Prot;Acc:Q9FXD6]

Coordinates

chr5:+:8044502..8048496

Molecular Weight (calculated)

65470.7 Da

IEP (calculated)

6.600

GRAVY (calculated)

-0.521

Length

581 amino acids

Sequence
(BLAST)

001: MENSKTSVGF SSPRTDTFPA GLRVLVVDDD PTWLKILEKM LKKCSYQVTT CGLAREALYV LRERKDGFDI VISDVNMPDM DGFKLLEHVG LEMDLPVIMM
101: SVDGETSRVM KGVQHGACDY LLKPIRMKEL RNIWQHVLRK KMQEARDIGN HELDQYDEVW ILNGAEILSG KKRKDFENKH DEREMSDSRC VDSSSMKKAR
201: VVWTVDLHQK FVKAVNQIGF DKVGPKKILD LMGIPWLTRE NVARHLQKYR LYLTRLQKED EAKASFIGTK HPDVSSKEIC SSLSLQNSLD ACTDVTNEKY
301: GCVTGDKTIV QNGKSNICES KVKGVVSVPA AEPRSVVEDN FDPQTTGSKI GLNDSFGLVN TNVKSAKVPI PYCSTGEAPQ PQYKQQDFKP HFRSANGLCH
401: QLLPVVSHQI PVDRTQETCF VNHTPSHEER DRHPDTKNRP SFFKTKNEVV GKFSPVESNV NLYQTVSHQQ TNFHTLEQMP STTWRATSHN VVNGPQSSPG
501: NLTLRSGSIV ASVGEEIHGA SIQGECFLAN NDLPNIEQFD YNDPQPISGV PTYLYDTLRF DYEYPIDSLE GNVIDQGLFI I

Best Arabidopsis Sequence Match ( AT1G67710.1 )
(BLAST)

001: MEKSGFSPVG LRVLVVDDDP TWLKILEKML KKCSYEVTTC GLAREALRLL RERKDGYDIV ISDVNMPDMD GFKLLEHVGL ELDLPVIMMS VDGETSRVMK
101: GVQHGACDYL LKPIRMKELK IIWQHVLRKK LQEVRDIEGC GYEGGADWIT RYDEAHFLGG GEDVSFGKKR KDFDFEKKLL QDESDPSSSS SKKARVVWSF
201: ELHHKFVNAV NQIGCDHKAG PKKILDLMNV PWLTRENVAS HLQKYRLYLS RLEKGKELKC YSGGVKNADS SPKDVEVNSG YQSPGRSSYV FSGGNSLIQK
301: ATEIDPKPLA SASLSDLNTD VIMPPKTKKT RIGFDPPISS SAFDSLLPWN DVPEVLESKP VLYENSFLQQ QPLPSQSSYV ANSAPSLMEE EMKPPYETPA
401: GGSSVNADEF LMPQDKIPTV TLQDLDPSAM KLQEFNTEAI LRSLNWELPE SHHSVSLDTD LDLTWLQGER FLANTGLQFQ DYSSSPSLLS ELPAHLNWYG
501: NERLPDPDEY SFMVDQGLFI S

Arabidopsis Description

ARR11Two-component response regulator [Source:UniProtKB/TrEMBL;Acc:Q0WRT0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.