Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004245.1-P | Field mustard | nucleus | 93.0 | 90.82 |
| CDX96070 | Canola | nucleus | 92.8 | 90.45 |
| CDY07410 | Canola | nucleus | 82.8 | 81.34 |
| CDY28869 | Canola | nucleus | 82.2 | 81.07 |
| AT1G67710.1 | Thale cress | nucleus | 82.4 | 79.08 |
| CDY52720 | Canola | nucleus | 22.0 | 58.82 |
| CDY54632 | Canola | cytosol | 16.2 | 54.73 |
| CDX82391 | Canola | cytosol | 16.2 | 54.73 |
| CDY54630 | Canola | cytosol | 16.8 | 54.19 |
| GSMUA_Achr3P14630_001 | Banana | cytosol | 39.2 | 53.7 |
| KRG97483 | Soybean | nucleus | 44.4 | 48.79 |
| PGSC0003DMT400031260 | Potato | nucleus | 48.6 | 41.9 |
| KRH31403 | Soybean | nucleus | 50.6 | 41.89 |
| Solyc05g014260.2.1 | Tomato | nucleus | 48.6 | 41.82 |
| CDX73905 | Canola | nucleus | 8.2 | 41.0 |
| VIT_17s0000g10100.t01 | Wine grape | nucleus | 45.8 | 40.18 |
| Os01t0904700-01 | Rice | nucleus | 46.2 | 39.69 |
| KRH58726 | Soybean | endoplasmic reticulum, extracellular | 50.4 | 39.69 |
| GSMUA_Achr8P32070_001 | Banana | nucleus | 43.2 | 39.63 |
| EES04061 | Sorghum | nucleus | 45.2 | 39.03 |
| TraesCS3A01G391600.1 | Wheat | nucleus | 45.4 | 38.87 |
| KRH42619 | Soybean | nucleus | 39.6 | 38.82 |
| TraesCS3B01G423600.1 | Wheat | nucleus | 45.2 | 38.7 |
| Zm00001d012128_P001 | Maize | nucleus | 45.4 | 37.65 |
| Zm00001d042463_P001 | Maize | nucleus | 45.2 | 36.75 |
| TraesCS3D01G384500.2 | Wheat | nucleus | 45.4 | 36.44 |
| VIT_17s0000g10110.t01 | Wine grape | nucleus | 32.8 | 36.28 |
| CDX87845 | Canola | cytosol, extracellular | 9.6 | 35.82 |
| CDY64566 | Canola | nucleus | 26.6 | 35.37 |
| CDY09419 | Canola | nucleus | 26.4 | 35.01 |
| CDX75892 | Canola | nucleus | 30.8 | 34.07 |
| CDY56439 | Canola | nucleus | 18.4 | 33.45 |
| CDX86245 | Canola | nucleus | 18.0 | 32.97 |
| CDX92102 | Canola | nucleus | 32.0 | 31.87 |
| CDX95898 | Canola | nucleus | 32.0 | 31.68 |
| CDX73907 | Canola | nucleus | 8.4 | 31.11 |
| CDY68249 | Canola | nucleus | 26.4 | 30.21 |
| CDY13465 | Canola | nucleus | 28.2 | 27.22 |
| CDX72337 | Canola | nucleus | 28.4 | 27.15 |
| CDX68803 | Canola | nucleus | 27.4 | 26.81 |
| CDX82389 | Canola | nucleus | 31.8 | 26.11 |
| CDY70103 | Canola | nucleus | 30.0 | 26.0 |
| CDY02794 | Canola | nucleus | 24.8 | 26.0 |
| CDX90546 | Canola | nucleus | 30.4 | 25.76 |
| CDY35371 | Canola | nucleus | 29.8 | 25.65 |
| CDY09718 | Canola | nucleus | 30.4 | 25.29 |
| CDY33920 | Canola | nucleus | 20.4 | 23.56 |
| CDY08579 | Canola | nucleus | 11.0 | 22.73 |
| CDY05641 | Canola | nucleus | 20.0 | 22.42 |
| CDY49965 | Canola | mitochondrion | 14.6 | 21.66 |
| CDY32725 | Canola | nucleus | 26.8 | 21.51 |
| CDX79963 | Canola | nucleus | 10.6 | 21.46 |
| CDY02793 | Canola | nucleus | 26.8 | 21.41 |
| CDY53674 | Canola | nucleus | 10.6 | 21.37 |
| CDY16482 | Canola | nucleus | 18.6 | 21.14 |
| CDX98816 | Canola | nucleus | 11.0 | 21.07 |
| CDX80940 | Canola | nucleus | 10.2 | 20.9 |
| CDX77263 | Canola | nucleus | 18.8 | 20.89 |
| CDY52133 | Canola | nucleus | 10.4 | 20.8 |
| CDY00969 | Canola | nucleus | 11.6 | 20.42 |
| CDX76652 | Canola | nucleus | 16.4 | 19.57 |
| CDY11437 | Canola | nucleus | 16.2 | 19.29 |
| CDY29358 | Canola | nucleus | 17.8 | 17.62 |
| CDY04335 | Canola | nucleus | 18.6 | 17.61 |
| CDY36273 | Canola | mitochondrion | 8.4 | 17.57 |
| CDX68392 | Canola | nucleus | 9.2 | 17.56 |
| CDY61256 | Canola | nucleus | 9.6 | 17.52 |
| CDX82988 | Canola | nucleus | 9.0 | 17.37 |
| CDX99104 | Canola | nucleus | 9.8 | 16.9 |
| CDY34423 | Canola | nucleus | 15.8 | 16.63 |
| CDY32209 | Canola | nucleus | 15.4 | 16.31 |
| CDX98997 | Canola | nucleus | 18.2 | 15.19 |
| CDX70016 | Canola | nucleus | 18.2 | 15.17 |
| CDY67763 | Canola | nucleus | 17.8 | 14.98 |
| CDX78284 | Canola | nucleus | 16.2 | 14.26 |
| CDX81041 | Canola | nucleus | 16.0 | 14.13 |
| CDY14053 | Canola | nucleus | 17.0 | 11.36 |
| CDX86925 | Canola | nucleus | 13.6 | 10.04 |
| CDY30695 | Canola | nucleus | 11.0 | 7.3 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:11.4.2.4 | MapMan:15.5.23 | Gene3D:3.40.50.2300 | GO:A0A078EQM6 | EnsemblPlants:CDY01838 |
| ProteinID:CDY01838 | ProteinID:CDY01838.1 | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00113009001 | InterPro:Homeobox-like_sf |
| InterPro:IPR001789 | InterPro:Myb_dom_plants | PFAM:PF00072 | PFAM:PF00249 | PIRSF:PIRSF036392 | PFscan:PS50110 |
| PANTHER:PTHR43874 | PANTHER:PTHR43874:SF27 | InterPro:Response_reg_B-typ_pln | InterPro:SANT/Myb | SMART:SM00448 | SUPFAM:SSF46689 |
| SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | TIGRFAMs:TIGR01557 | UniParc:UPI0004EF2CB0 | SEG:seg | : |
Description
BnaC06g28780D
Coordinates
chrLK031929:-:767191..769022
Molecular Weight (calculated)
56799.5 Da
IEP (calculated)
4.875
GRAVY (calculated)
-0.479
Length
500 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKGFSPVGL RVLVVDDDPT WLKILEKMLK KCSYEVTTCG LAREALRLLR ERKDGYDIVI SDVNMPDMDG FKLLEHVGLE LDLPVIMMSV DGETKRVMKG
101: VQHGACDYLL KPIRMKELKI IWQHVLRKKL QEVRDIEGCY EGGADWFTRN DETHYLGGGE DVSFGRKRKE FDFEKKLLLQ DESDPSSSTA KKARVVWSFE
201: LHQKFVNAVN QIGCDHKAGP KKILDLMNVP WLTRENVASH LQKYRLYLSR LEKGKELKCY SGGVKNMDSP PKDAEFSSLI HKGETDPKQL ASSSVSDPSS
301: DVHMPPKAKK TRVEFDPPIS SSAFDSLIPW DDVIEPKPTI LYESSFLQQQ PLPSQSPYVA NSAPTLMEDE MKPSYETCVN ADEFLMPQDK NSTVILQDLV
401: DLSAPSVISS NVTNDTETML RSLNWELPES HHSGFIDTDL DFSWIQNEHF LANTSGNFQN FQFQDYSCSP SLLSELPPHP WFGNEPEEYT LMIDNGLFIS
101: VQHGACDYLL KPIRMKELKI IWQHVLRKKL QEVRDIEGCY EGGADWFTRN DETHYLGGGE DVSFGRKRKE FDFEKKLLLQ DESDPSSSTA KKARVVWSFE
201: LHQKFVNAVN QIGCDHKAGP KKILDLMNVP WLTRENVASH LQKYRLYLSR LEKGKELKCY SGGVKNMDSP PKDAEFSSLI HKGETDPKQL ASSSVSDPSS
301: DVHMPPKAKK TRVEFDPPIS SSAFDSLIPW DDVIEPKPTI LYESSFLQQQ PLPSQSPYVA NSAPTLMEDE MKPSYETCVN ADEFLMPQDK NSTVILQDLV
401: DLSAPSVISS NVTNDTETML RSLNWELPES HHSGFIDTDL DFSWIQNEHF LANTSGNFQN FQFQDYSCSP SLLSELPPHP WFGNEPEEYT LMIDNGLFIS
001: MEKSGFSPVG LRVLVVDDDP TWLKILEKML KKCSYEVTTC GLAREALRLL RERKDGYDIV ISDVNMPDMD GFKLLEHVGL ELDLPVIMMS VDGETSRVMK
101: GVQHGACDYL LKPIRMKELK IIWQHVLRKK LQEVRDIEGC GYEGGADWIT RYDEAHFLGG GEDVSFGKKR KDFDFEKKLL QDESDPSSSS SKKARVVWSF
201: ELHHKFVNAV NQIGCDHKAG PKKILDLMNV PWLTRENVAS HLQKYRLYLS RLEKGKELKC YSGGVKNADS SPKDVEVNSG YQSPGRSSYV FSGGNSLIQK
301: ATEIDPKPLA SASLSDLNTD VIMPPKTKKT RIGFDPPISS SAFDSLLPWN DVPEVLESKP VLYENSFLQQ QPLPSQSSYV ANSAPSLMEE EMKPPYETPA
401: GGSSVNADEF LMPQDKIPTV TLQDLDPSAM KLQEFNTEAI LRSLNWELPE SHHSVSLDTD LDLTWLQGER FLANTGLQFQ DYSSSPSLLS ELPAHLNWYG
501: NERLPDPDEY SFMVDQGLFI S
101: GVQHGACDYL LKPIRMKELK IIWQHVLRKK LQEVRDIEGC GYEGGADWIT RYDEAHFLGG GEDVSFGKKR KDFDFEKKLL QDESDPSSSS SKKARVVWSF
201: ELHHKFVNAV NQIGCDHKAG PKKILDLMNV PWLTRENVAS HLQKYRLYLS RLEKGKELKC YSGGVKNADS SPKDVEVNSG YQSPGRSSYV FSGGNSLIQK
301: ATEIDPKPLA SASLSDLNTD VIMPPKTKKT RIGFDPPISS SAFDSLLPWN DVPEVLESKP VLYENSFLQQ QPLPSQSSYV ANSAPSLMEE EMKPPYETPA
401: GGSSVNADEF LMPQDKIPTV TLQDLDPSAM KLQEFNTEAI LRSLNWELPE SHHSVSLDTD LDLTWLQGER FLANTGLQFQ DYSSSPSLLS ELPAHLNWYG
501: NERLPDPDEY SFMVDQGLFI S
Arabidopsis Description
ARR11Two-component response regulator [Source:UniProtKB/TrEMBL;Acc:Q0WRT0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.