Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29358 | Canola | nucleus | 85.23 | 89.11 |
| CDY16482 | Canola | nucleus | 47.16 | 56.59 |
| CDX77263 | Canola | nucleus | 48.11 | 56.44 |
| CDY52720 | Canola | nucleus | 13.45 | 37.97 |
| CDX73905 | Canola | nucleus | 7.01 | 37.0 |
| AT1G49190.2 | Thale cress | nucleus | 39.77 | 33.76 |
| CDY54630 | Canola | cytosol | 9.66 | 32.9 |
| CDY54632 | Canola | cytosol | 9.09 | 32.43 |
| CDX76652 | Canola | nucleus | 25.57 | 32.22 |
| CDY11437 | Canola | nucleus | 25.57 | 32.14 |
| CDX82391 | Canola | cytosol | 8.9 | 31.76 |
| VIT_11s0052g01160.t01 | Wine grape | cytosol | 12.31 | 30.09 |
| CDX87845 | Canola | cytosol, extracellular | 6.82 | 26.87 |
| CDX73907 | Canola | nucleus | 6.82 | 26.67 |
| CDY56439 | Canola | nucleus | 13.64 | 26.18 |
| CDX86245 | Canola | nucleus | 13.45 | 26.01 |
| CDY64566 | Canola | nucleus | 17.8 | 25.0 |
| CDY09419 | Canola | nucleus | 17.61 | 24.67 |
| Zm00001d032784_P001 | Maize | nucleus | 15.72 | 24.63 |
| KXG38401 | Sorghum | nucleus | 16.1 | 24.5 |
| CDX75892 | Canola | nucleus | 19.7 | 23.01 |
| GSMUA_Achr5P13050_001 | Banana | cytosol | 9.66 | 22.27 |
| CDX95898 | Canola | nucleus | 20.83 | 21.78 |
| CDX92102 | Canola | nucleus | 20.45 | 21.51 |
| CDY68249 | Canola | nucleus | 17.61 | 21.28 |
| CDY33920 | Canola | nucleus | 17.42 | 21.25 |
| CDY05641 | Canola | nucleus | 17.8 | 21.08 |
| CDY28869 | Canola | nucleus | 19.32 | 20.12 |
| CDY13465 | Canola | nucleus | 19.51 | 19.88 |
| CDY07410 | Canola | nucleus | 19.13 | 19.84 |
| CDX72337 | Canola | nucleus | 19.51 | 19.69 |
| CDY02794 | Canola | nucleus | 17.42 | 19.29 |
| CDX68392 | Canola | nucleus | 9.47 | 19.08 |
| Os10t0463400-01 | Rice | nucleus | 12.31 | 19.06 |
| VIT_07s0005g01010.t01 | Wine grape | nucleus | 19.13 | 18.91 |
| PGSC0003DMT400090747 | Potato | nucleus | 19.89 | 18.78 |
| CDY01838 | Canola | nucleus | 17.61 | 18.6 |
| CDX68803 | Canola | nucleus | 17.99 | 18.59 |
| CDX96070 | Canola | nucleus | 17.99 | 18.52 |
| Solyc12g099380.1.1 | Tomato | nucleus | 19.13 | 18.2 |
| CDX82988 | Canola | nucleus | 8.9 | 18.15 |
| CDY35371 | Canola | nucleus | 19.89 | 18.07 |
| CDY70103 | Canola | nucleus | 19.7 | 18.02 |
| CDX90546 | Canola | nucleus | 20.08 | 17.97 |
| CDX82389 | Canola | nucleus | 20.64 | 17.9 |
| CDY09718 | Canola | nucleus | 20.27 | 17.8 |
| CDX79963 | Canola | nucleus | 8.14 | 17.41 |
| CDY53674 | Canola | nucleus | 8.14 | 17.34 |
| CDY61256 | Canola | nucleus | 8.71 | 16.79 |
| CDY36273 | Canola | mitochondrion | 7.2 | 15.9 |
| CDX99104 | Canola | nucleus | 8.71 | 15.86 |
| CDY32725 | Canola | nucleus | 18.18 | 15.41 |
| CDY02793 | Canola | nucleus | 18.18 | 15.34 |
| CDY08579 | Canola | nucleus | 7.01 | 15.29 |
| CDX70016 | Canola | nucleus | 17.23 | 15.17 |
| CDY00969 | Canola | nucleus | 8.14 | 15.14 |
| CDX98997 | Canola | nucleus | 16.86 | 14.86 |
| CDX81041 | Canola | nucleus | 15.72 | 14.66 |
| CDX98816 | Canola | nucleus | 7.2 | 14.56 |
| CDY52133 | Canola | nucleus | 6.82 | 14.4 |
| CDX80940 | Canola | nucleus | 6.63 | 14.34 |
| CDY67763 | Canola | nucleus | 16.1 | 14.31 |
| CDX78284 | Canola | nucleus | 15.34 | 14.26 |
| CDY32209 | Canola | nucleus | 12.5 | 13.98 |
| CDY34423 | Canola | nucleus | 12.5 | 13.89 |
| CDY49965 | Canola | mitochondrion | 8.52 | 13.35 |
| CDY14053 | Canola | nucleus | 14.96 | 10.56 |
| CDX86925 | Canola | nucleus | 12.5 | 9.75 |
| CDY30695 | Canola | nucleus | 10.23 | 7.17 |
| TraesCS7A01G539600.1 | Wheat | nucleus | 4.36 | 6.8 |
| TraesCSU01G179800.1 | Wheat | nucleus, plastid | 1.33 | 2.11 |
| TraesCSU01G196300.1 | Wheat | nucleus, plastid | 1.33 | 2.11 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:11.4.2.4 | MapMan:15.5.23 | Gene3D:3.40.50.2300 | GO:A0A078EQV0 | EnsemblPlants:CDY04335 |
| ProteinID:CDY04335 | ProteinID:CDY04335.1 | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 |
| EnsemblPlantsGene:GSBRNA2T00118200001 | InterPro:Homeobox-like_sf | InterPro:IPR001789 | InterPro:Myb_dom_plants | PFAM:PF00072 | PFscan:PS50110 |
| PANTHER:PTHR43874 | PANTHER:PTHR43874:SF23 | SMART:SM00448 | SUPFAM:SSF46689 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver |
| TIGRFAMs:TIGR01557 | UniParc:UPI0004EBF0A6 | SEG:seg | : | : | : |
Description
BnaC05g25970D
Coordinates
chrLK031951:+:1060090..1062059
Molecular Weight (calculated)
59749.5 Da
IEP (calculated)
6.197
GRAVY (calculated)
-0.684
Length
528 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSFLNEFPA SANVLVVEPN FVTLRKMKNL MIKYGYQVTV YADAEAALAF LRNCEHGINL VIWDFHMPGI NGIQALKIIC TKMDLPVVIM SDDDRTVSVM
101: QATVHGACYY VMKPIRKEII ATIWQHIVRK RMMSKSGVIP PVQLDVVQNN DGFKENKDDS MPVDQGNSEQ NINMIGEKAE KKPQIGENLP IQSDSVQNNG
201: SDQDNNDSWT TSPYNSEQNI DGEERKQLKT RVVWTNDLQE KFLEAVNTLG GARKANPKPL LKMLEDMNIK GLTRRNVCSH LQKYRLSLQG KQITQQMQEF
301: GWSSACTTSP LLGLNNVHTA TSSLINGGAS YPVQENQYQN GYMEVNKNKT ASSSLMTGRA TFPVQDNHYQ NGYMEVNNNH AASSSLMNCR ATYPVEDNQY
401: QNGYLGVNNN QVMTNTMPYD FDHDNYLQKQ KLEQQQQYQL SNQMKPEKAS NIDILKDLGL AYTMPRLPYD LGHGNHLQQE QQHQLPHQWN NVMSNNEPEQ
501: ASGNGVTGVE GTYPSLPYDP NDFYSYNK
101: QATVHGACYY VMKPIRKEII ATIWQHIVRK RMMSKSGVIP PVQLDVVQNN DGFKENKDDS MPVDQGNSEQ NINMIGEKAE KKPQIGENLP IQSDSVQNNG
201: SDQDNNDSWT TSPYNSEQNI DGEERKQLKT RVVWTNDLQE KFLEAVNTLG GARKANPKPL LKMLEDMNIK GLTRRNVCSH LQKYRLSLQG KQITQQMQEF
301: GWSSACTTSP LLGLNNVHTA TSSLINGGAS YPVQENQYQN GYMEVNKNKT ASSSLMTGRA TFPVQDNHYQ NGYMEVNNNH AASSSLMNCR ATYPVEDNQY
401: QNGYLGVNNN QVMTNTMPYD FDHDNYLQKQ KLEQQQQYQL SNQMKPEKAS NIDILKDLGL AYTMPRLPYD LGHGNHLQQE QQHQLPHQWN NVMSNNEPEQ
501: ASGNGVTGVE GTYPSLPYDP NDFYSYNK
001: MLVGKISGYE DNTRSLERET SEITSLLSQF PGNTNVLVVD TNFTTLLNMK QIMKQYAYQV SIETDAEKAL AFLTSCKHEI NIVIWDFHMP GIDGLQALKS
101: ITSKLDLPVV IMSDDNQTES VMKATFYGAC DYVVKPVKEE VMANIWQHIV RKRLIFKPDV APPKPRMTWS EVFQPVQSHL VPTDGLDRDH FDSITINGGN
201: GIQNMEKKQG KKPRKPRMTW TEELHQKFLE AIEIIGGIEK ANPKVLVECL QEMRIEGITR SNVASHLQKH RINLEENQIP QQTQGNGWAT AYGTLAPSLQ
301: GSDNVNTTIP SYLMNGPATL NQIQQNQYQN GFLTMNNNQI ITNPPPPLPY LDHHHQQQHQ SSPQFNYLMN NEELLQASGL SATDLELTYP SLPYDPQEYL
401: INGYNYN
101: ITSKLDLPVV IMSDDNQTES VMKATFYGAC DYVVKPVKEE VMANIWQHIV RKRLIFKPDV APPKPRMTWS EVFQPVQSHL VPTDGLDRDH FDSITINGGN
201: GIQNMEKKQG KKPRKPRMTW TEELHQKFLE AIEIIGGIEK ANPKVLVECL QEMRIEGITR SNVASHLQKH RINLEENQIP QQTQGNGWAT AYGTLAPSLQ
301: GSDNVNTTIP SYLMNGPATL NQIQQNQYQN GFLTMNNNQI ITNPPPPLPY LDHHHQQQHQ SSPQFNYLMN NEELLQASGL SATDLELTYP SLPYDPQEYL
401: INGYNYN
Arabidopsis Description
RR19response regulator 19 [Source:TAIR;Acc:AT1G49190]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.