Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G196300.1 | Wheat | nucleus, plastid | 77.22 | 78.85 |
| TraesCSU01G179800.1 | Wheat | nucleus, plastid | 76.92 | 78.55 |
| TraesCS3A01G473600.1 | Wheat | nucleus | 46.45 | 27.5 |
| TraesCS7A01G511100.1 | Wheat | nucleus | 45.86 | 27.15 |
| TraesCS7A01G511300.1 | Wheat | nucleus | 45.56 | 26.97 |
| TraesCS7A01G502300.1 | Wheat | nucleus | 44.97 | 26.81 |
| TraesCS7A01G510300.1 | Wheat | nucleus | 37.87 | 25.65 |
| TraesCS3A01G473800.1 | Wheat | nucleus | 33.43 | 20.04 |
| TraesCS3A01G361800.1 | Wheat | nucleus, plastid | 6.51 | 9.78 |
| TraesCS1A01G258400.1 | Wheat | nucleus | 7.69 | 8.33 |
| TraesCS6A01G146200.3 | Wheat | nucleus | 14.79 | 7.81 |
| KRH60425 | Soybean | nucleus | 8.28 | 7.78 |
| TraesCS3A01G526600.1 | Wheat | nucleus | 5.62 | 6.67 |
| Zm00001d032784_P001 | Maize | nucleus | 6.51 | 6.53 |
| TraesCS6A01G359200.1 | Wheat | nucleus | 12.72 | 6.36 |
| TraesCS7A01G146500.1 | Wheat | nucleus | 11.24 | 6.28 |
| KXG38401 | Sorghum | nucleus | 6.21 | 6.05 |
| CDY33920 | Canola | nucleus | 7.69 | 6.0 |
| Solyc12g099380.1.1 | Tomato | nucleus | 9.76 | 5.95 |
| Bra020652.1-P | Field mustard | nucleus | 7.69 | 5.9 |
| TraesCS7A01G146400.1 | Wheat | nucleus | 10.65 | 5.86 |
| TraesCS7A01G146700.1 | Wheat | nucleus | 11.24 | 5.77 |
| TraesCS3A01G391600.1 | Wheat | nucleus | 9.76 | 5.65 |
| VIT_07s0005g01010.t01 | Wine grape | nucleus | 8.88 | 5.62 |
| CDY05641 | Canola | nucleus | 7.1 | 5.38 |
| PGSC0003DMT400090747 | Potato | nucleus | 8.88 | 5.37 |
| Bra037427.1-P | Field mustard | nucleus | 4.14 | 5.13 |
| CDX86245 | Canola | nucleus | 4.14 | 5.13 |
| CDY56439 | Canola | nucleus | 4.14 | 5.09 |
| Os10t0463400-01 | Rice | nucleus | 4.73 | 4.69 |
| CDY29358 | Canola | nucleus | 6.8 | 4.55 |
| Bra032275.1-P | Field mustard | nucleus | 6.8 | 4.55 |
| TraesCS4A01G063100.1 | Wheat | nucleus | 8.88 | 4.39 |
| CDY04335 | Canola | nucleus | 6.8 | 4.36 |
| CDY16482 | Canola | nucleus | 5.62 | 4.32 |
| Bra014172.1-P | Field mustard | nucleus | 5.62 | 4.23 |
| AT5G49240.1 | Thale cress | cytoskeleton, cytosol, nucleus | 3.55 | 4.11 |
| CDY11437 | Canola | nucleus | 5.03 | 4.05 |
| CDX77263 | Canola | nucleus | 5.33 | 4.0 |
| CDX76652 | Canola | nucleus | 4.73 | 3.82 |
| Bra041027.1-P | Field mustard | nucleus | 4.73 | 3.81 |
| AT3G62670.1 | Thale cress | nucleus | 4.44 | 3.52 |
| AT1G49190.2 | Thale cress | nucleus | 4.44 | 2.41 |
| GSMUA_Achr5P13050_001 | Banana | cytosol | 1.18 | 1.75 |
| TraesCS7A01G510400.1 | Wheat | cytosol | 0.3 | 1.19 |
| VIT_11s0052g01160.t01 | Wine grape | cytosol | 0.3 | 0.46 |
| TraesCS7A01G539700.1 | Wheat | cytosol, nucleus, plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G539600.1 | EnsemblPlantsGene:TraesCS7A01G539600 | Gene3D:1.10.10.60 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF7 | SEG:seg |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7A:+:716505095..716506638
Molecular Weight (calculated)
37317.4 Da
IEP (calculated)
7.498
GRAVY (calculated)
-0.671
Length
338 amino acids
Sequence
(BLAST)
(BLAST)
001: MNVDYLTRES IASHLQKYRL HLRRVKSNPV GDASERHNSS YNNMNNQGSF MRNHEHERWC MSSGFLSPNN FSAMGHLAQP ANTHRNSCTG SFIHDGRMYK
101: YVAPKLSDAG RFAGSIDPPT NLYNNIPNET TLEEFPSYSF GDSYAGRMRG KLVETNKGKF PDPSYNSATH ATLTGVLHRG FNEQIVPKNA PSNQSFIGML
201: NPCGSHPVSS SEMVKGGSSS MSLDGLSERM APFNIAKNTS SVGMMLNENT APGNGRISMT HTDMVNSGRT ISTLPNHQTE NVVAMTDKVD GGDAVSYHPM
301: QVGTIGQHAL NDQFNDINDF SWDDFFSQPA GCRFHYRG
101: YVAPKLSDAG RFAGSIDPPT NLYNNIPNET TLEEFPSYSF GDSYAGRMRG KLVETNKGKF PDPSYNSATH ATLTGVLHRG FNEQIVPKNA PSNQSFIGML
201: NPCGSHPVSS SEMVKGGSSS MSLDGLSERM APFNIAKNTS SVGMMLNENT APGNGRISMT HTDMVNSGRT ISTLPNHQTE NVVAMTDKVD GGDAVSYHPM
301: QVGTIGQHAL NDQFNDINDF SWDDFFSQPA GCRFHYRG
001: MPGMNGYNLL QQVGLLEMDL PVIMMSVDGR TTTVMTGINH GACDYLIKPI RPEELKNIWQ HVVRRKCVMK KELRSSQALE DNKNSGSLET VVVSVSECSE
101: ESLMKCRNKK KKKKRSVDRD DNEDDLLLDP GNSKKSRVVW SIELHQQFVN AVNKLGIDKA VPKRILELMN VPGLSRENVA SHLQKFRLYL KRLSGEASQS
201: NDSESTKRYE NIQALVSSGQ LHPQTLAALF GQPIDNHHSA SFGVWIPNDN LGRSQNEHFS VDVSSASNRP VSVAVHGLSS SANFRQRGDV NNNRIRQGYG
301: SNVNEESWIL ERSSRQR
101: ESLMKCRNKK KKKKRSVDRD DNEDDLLLDP GNSKKSRVVW SIELHQQFVN AVNKLGIDKA VPKRILELMN VPGLSRENVA SHLQKFRLYL KRLSGEASQS
201: NDSESTKRYE NIQALVSSGQ LHPQTLAALF GQPIDNHHSA SFGVWIPNDN LGRSQNEHFS VDVSSASNRP VSVAVHGLSS SANFRQRGDV NNNRIRQGYG
301: SNVNEESWIL ERSSRQR
Arabidopsis Description
ARR14response regulator 14 [Source:TAIR;Acc:AT2G01760]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.