Factsheet for Bra032275.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29358	Canola	nucleus	100.0	100.0
Bra014172.1-P	Field mustard	nucleus	52.48	59.02
Bra001378.1-P	Field mustard	nucleus	6.93	35.71
AT1G49190.2	Thale cress	nucleus	43.37	35.21
Bra041027.1-P	Field mustard	nucleus	27.33	32.86
Bra001641.1-P	Field mustard	cytosol	9.5	32.43
VIT_11s0052g01160.t01	Wine grape	cytosol	13.47	31.48
Bra001377.1-P	Field mustard	nucleus	6.93	25.93
Bra037427.1-P	Field mustard	nucleus	13.86	25.64
KXG38401	Sorghum	nucleus	17.03	24.78
Zm00001d032784_P001	Maize	nucleus	16.44	24.63
Bra026635.1-P	Field mustard	nucleus	17.82	23.87
GSMUA_Achr5P13050_001	Banana	cytosol	9.9	21.83
Bra020652.1-P	Field mustard	nucleus	18.02	20.63
Bra023972.1-P	Field mustard	nucleus	20.4	19.88
PGSC0003DMT400090747	Potato	nucleus	21.39	19.32
VIT_07s0005g01010.t01	Wine grape	nucleus	20.2	19.1
Os10t0463400-01	Rice	nucleus	12.87	19.06
Bra004076.1-P	Field mustard	nucleus	19.21	19.06
Solyc12g099380.1.1	Tomato	nucleus	20.59	18.74
Bra004245.1-P	Field mustard	nucleus	18.22	17.97
Bra032035.1-P	Field mustard	nucleus	20.2	17.56
Bra012743.1-P	Field mustard	nucleus	20.2	17.23
Bra033809.1-P	Field mustard	nucleus	9.7	17.19
Bra004593.1-P	Field mustard	nucleus	8.32	17.0
Bra033527.1-P	Field mustard	nucleus	20.99	16.75
Bra001643.1-P	Field mustard	nucleus	21.19	16.46
Bra022183.1-P	Field mustard	nucleus	21.78	16.15
Bra018204.1-P	Field mustard	nucleus	9.5	15.79
Bra020390.1-P	Field mustard	nucleus	18.81	15.25
Bra005837.1-P	Field mustard	nucleus	7.52	15.14
Bra029866.1-P	Field mustard	nucleus	8.12	14.34
Bra009087.1-P	Field mustard	nucleus	7.52	14.23
Bra034144.1-P	Field mustard	nucleus	8.51	13.23
Bra009284.1-P	Field mustard	nucleus	18.02	11.77
Bra005928.1-P	Field mustard	nucleus	17.62	11.73
Bra028705.1-P	Field mustard	nucleus	16.44	10.82
TraesCS7A01G539600.1	Wheat	nucleus	4.55	6.8
TraesCSU01G179800.1	Wheat	nucleus, plastid	1.78	2.72
TraesCSU01G196300.1	Wheat	nucleus, plastid	1.78	2.72

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	EnsemblPlantsGene:Bra032275	EnsemblPlants:Bra032275.1
EnsemblPlants:Bra032275.1-P	InterPro:CheY-like_superfamily	GO:GO:0000160	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR001789	UniProt:M4ETZ3	InterPro:Myb_dom_plants
PFAM:PF00072	PFscan:PS50110	PANTHER:PTHR43874	PANTHER:PTHR43874:SF23	SMART:SM00448	SUPFAM:SSF46689
SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI0002547C99	SEG:seg	:

Description

AT1G49190 (E=2e-051) ARR19 | ARR19 (ARABIDOPSIS RESPONSE REGULATOR 19); transcription factor/ two-component response regulator

Coordinates

chrA05:-:12054644..12056542

Molecular Weight (calculated)

57211.5 Da

IEP (calculated)

6.410

GRAVY (calculated)

-0.713

Length

505 amino acids

Sequence
(BLAST)

001: MSEASRTDDG DRTLFKQRET SQISSFLNEF PASANVLVVE PNFVTLRKMK NLMIKYGYQV TVYADAEAAL AFLRNCEHGI NLVIWDFHMP RINGIQALKI
101: ICTKMDLPVV IMSDDDRKTS VMQATVHGAC YYVMKPIRKE IIATIWQHIV RKRMMSKSGL IPPVQLDAVQ NHDGFKENKD DSMPVDQGNS EQNINMIGEK
201: AEKKPQIGEN LPIQSDSVQN NGSDQDNNDS WTKSPYNSEQ NMDGEERKQP KTRVVWTNDL QEKFLKAVDI LGGARKANPK PLLKMLEDMN IKGLTRRHVC
301: SHLQKYRLSL EGKEITQQMQ EFGWSSACTT SPLLGLNNVH TATSSLINGG ASYPVQENQY QNGYMEVNNN HAASSTLMNG RATYPVQDNQ YQNGYLGVNN
401: NQVMTNTMPY DFDHDHYLQK QKPEKASSID IPEDLGLAYT MPRLPYNLGH GNHLQHEQQH QLSHQWNNVM SNNEPELPSS NGVTGVGGTY PSLPYDPNEF
501: YNYNQ

Best Arabidopsis Sequence Match ( AT1G49190.1 )
(BLAST)

001: MLVGKISGYE DNTRSLERET SEITSLLSQF PGNTNVLVVD TNFTTLLNMK QIMKQYAYQV SIETDAEKAL AFLTSCKHEI NIVIWDFHMP GIDGLQALKS
101: ITSKLDLPVV IMSDDNQTES VMKATFYGAC DYVVKPVKEE VMANIWQHIV RKRLIFKPDV APPKPRMTWS EVFQPVQSHL VPTDGLDRDH FDSITINGGN
201: GIQNMEKKQG KKPRKPRMTW TEELHQKFLE AIEIIGGIEK ANPKVLVECL QEMRIEGITR SNVASHLQKH RINLEENQIP QQTQGNGWAT AYGTLAPSLQ
301: GSDNVNTTIP SYLMNGPATL NQIQQNQYQN GFLTMNNNQI ITNPPPPLPY LDHHHQQQHQ SSPQFNYLMN NEELLQASGL SATDLELTYP SLPYDPQEYL
401: INGYNYN

Arabidopsis Description

RR19response regulator 19 [Source:TAIR;Acc:AT1G49190]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.