Factsheet for Bra034144.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra029866.1-P	Field mustard	nucleus	78.15	88.81
AT3G10760.1	Thale cress	nucleus	89.85	87.16
Bra009087.1-P	Field mustard	nucleus	56.92	69.29
Bra005837.1-P	Field mustard	nucleus	50.77	65.74
Bra004593.1-P	Field mustard	nucleus	45.54	59.92
GSMUA_Achr8P05880_001	Banana	nucleus	51.69	53.33
GSMUA_Achr11P...	Banana	nucleus	49.23	52.81
GSMUA_Achr5P27500_001	Banana	nucleus	45.85	52.46
HORVU1Hr1G064950.1	Barley	nucleus	45.23	48.2
Bra001378.1-P	Field mustard	nucleus	14.46	47.96
TraesCS1D01G257700.1	Wheat	nucleus	45.54	47.9
TraesCS1B01G268900.1	Wheat	nucleus	45.23	47.73
TraesCS1A01G258400.1	Wheat	nucleus	45.23	47.12
Zm00001d010280_P001	Maize	nucleus	42.77	46.49
Zm00001d038191_P001	Maize	nucleus	44.0	45.83
Bra001377.1-P	Field mustard	nucleus	16.0	38.52
Os05t0412000-00	Rice	nucleus	45.85	36.08
Bra033809.1-P	Field mustard	nucleus	31.38	35.79
Bra018204.1-P	Field mustard	nucleus	32.62	34.87
Bra037427.1-P	Field mustard	nucleus	12.31	14.65
Bra026635.1-P	Field mustard	nucleus	16.92	14.59
Bra032035.1-P	Field mustard	nucleus	22.15	12.39
Bra020652.1-P	Field mustard	nucleus	15.38	11.34
Bra023972.1-P	Field mustard	nucleus	17.54	11.0
Bra004245.1-P	Field mustard	nucleus	17.23	10.94
Bra041027.1-P	Field mustard	nucleus	13.85	10.71
Bra012743.1-P	Field mustard	nucleus	19.38	10.64
Bra022183.1-P	Field mustard	nucleus	21.85	10.43
Bra001643.1-P	Field mustard	nucleus	20.62	10.31
Bra004076.1-P	Field mustard	nucleus	16.0	10.22
Bra020390.1-P	Field mustard	nucleus	18.77	9.79
Bra033527.1-P	Field mustard	nucleus	18.77	9.64
Bra032275.1-P	Field mustard	nucleus	13.23	8.51
Bra014172.1-P	Field mustard	nucleus	11.69	8.46
Bra028705.1-P	Field mustard	nucleus	17.54	7.43
Bra005928.1-P	Field mustard	nucleus	17.23	7.38
Bra009284.1-P	Field mustard	nucleus	17.23	7.24
Bra001641.1-P	Field mustard	cytosol	2.46	5.41

Protein Annotations

Gene3D:1.10.10.60	MapMan:35.1	EnsemblPlantsGene:Bra034144	EnsemblPlants:Bra034144.1	EnsemblPlants:Bra034144.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M4EZA1	InterPro:Myb_dom
InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR31442	PANTHER:PTHR31442:SF1	InterPro:SANT/Myb
SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI0002543DD2	SEG:seg	:	:

Description

AT3G10760 (E=1e-114) | myb family transcription factor

Coordinates

chrA01:-:27237801..27238778

Molecular Weight (calculated)

35144.0 Da

IEP (calculated)

7.043

GRAVY (calculated)

-0.541

Length

325 amino acids

Sequence
(BLAST)

001: MREDDTDWFT RWEEELPSPE ELIPLSQSLI SPDLALAFDI RLPNNSGQPH HHHHHHQSTP PPQLPSSQAN SSAEFAADSA DLGSGATAGA GDEPARTLKR
101: PRLVWTPQLH KRFVDAVAHL GIKNAVPKTI MQLMSVDGLT RENVASHLQK YRLYLKRMQG LSSGGGGGSD PATDRLFASS PVPAHFLHPN RVPSSDHFMP
201: SFVPIATLQQ QQQMAAVAAA AAAAASAHLQ PPQFHHRQIS AAHYGSPTAN GQFGSPPATG QFGSPPANGK FDQSFLARQT QQQQTLQRMS TPSLHSPVGN
301: YIEDLESANA NGGRTVLTLF PTRDD

Best Arabidopsis Sequence Match ( AT3G10760.1 )
(BLAST)

001: MREDDSDWFA RWEEELPSPE ELMPISQSLI SPDLALAFDI RTPNHGNGNS NQPHHHHHHQ TTPPTPSQLQ LPSSQANSSA EFAADSADLG SGGAAGDEPA
101: RTLKRPRLVW TPQLHKRFVD AVAHLGIKNA VPKTIMQLMS VDGLTRENVA SHLQKYRLYL KRMQGLSSGG GAGSDPATDR LFASSPVPAH FLHPNRVPSS
201: DHFMPSFVPI ATLQQQQQMA AAAAAAAAAN PHLQPPQFHR QIAAAHFGSP TNGGFSSPTS NGQFGSPTSN GFGSPTTNGK FDPSFLAVRQ TQQQPIQRMS
301: TPSLHSPVSN YVEDLESANA NGGRTVLTLF PTRDD

Arabidopsis Description

Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SG82]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.