Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86245 | Canola | nucleus | 100.0 | 100.0 |
| AT5G49240.1 | Thale cress | cytoskeleton, cytosol, nucleus | 57.51 | 53.77 |
| Bra020652.1-P | Field mustard | nucleus | 60.07 | 37.19 |
| Bra001378.1-P | Field mustard | nucleus | 12.82 | 35.71 |
| Bra001641.1-P | Field mustard | cytosol | 18.68 | 34.46 |
| VIT_11s0052g01160.t01 | Wine grape | cytosol | 23.08 | 29.17 |
| Bra001377.1-P | Field mustard | nucleus | 12.82 | 25.93 |
| Zm00001d032784_P001 | Maize | nucleus | 27.84 | 22.55 |
| Bra026635.1-P | Field mustard | nucleus | 30.77 | 22.28 |
| GSMUA_Achr5P13050_001 | Banana | cytosol | 17.95 | 21.4 |
| KXG38401 | Sorghum | nucleus | 25.64 | 20.17 |
| Bra004245.1-P | Field mustard | nucleus | 32.97 | 17.58 |
| Bra023972.1-P | Field mustard | nucleus | 32.97 | 17.37 |
| Bra004076.1-P | Field mustard | nucleus | 32.23 | 17.29 |
| Bra012743.1-P | Field mustard | nucleus | 36.26 | 16.72 |
| Bra004593.1-P | Field mustard | nucleus | 14.29 | 15.79 |
| PGSC0003DMT400090747 | Potato | nucleus | 32.23 | 15.74 |
| Bra033527.1-P | Field mustard | nucleus | 36.26 | 15.64 |
| VIT_07s0005g01010.t01 | Wine grape | nucleus | 30.4 | 15.54 |
| Os10t0463400-01 | Rice | nucleus | 19.41 | 15.54 |
| Bra032035.1-P | Field mustard | nucleus | 32.97 | 15.49 |
| Bra033809.1-P | Field mustard | nucleus | 16.12 | 15.44 |
| Bra014172.1-P | Field mustard | nucleus | 25.27 | 15.37 |
| Solyc12g099380.1.1 | Tomato | nucleus | 31.14 | 15.32 |
| Bra001643.1-P | Field mustard | nucleus | 36.26 | 15.23 |
| Bra022183.1-P | Field mustard | nucleus | 36.26 | 14.54 |
| Bra018204.1-P | Field mustard | nucleus | 16.12 | 14.47 |
| Bra005837.1-P | Field mustard | nucleus | 12.82 | 13.94 |
| Bra032275.1-P | Field mustard | nucleus | 25.64 | 13.86 |
| Bra020390.1-P | Field mustard | nucleus | 30.77 | 13.48 |
| Bra009087.1-P | Field mustard | nucleus | 13.19 | 13.48 |
| Bra029866.1-P | Field mustard | nucleus | 13.92 | 13.29 |
| Bra041027.1-P | Field mustard | nucleus | 19.78 | 12.86 |
| Bra034144.1-P | Field mustard | nucleus | 14.65 | 12.31 |
| KRH60425 | Soybean | nucleus | 14.65 | 11.11 |
| Bra005928.1-P | Field mustard | nucleus | 27.47 | 9.88 |
| Bra028705.1-P | Field mustard | nucleus | 27.11 | 9.65 |
| Bra009284.1-P | Field mustard | nucleus | 26.74 | 9.44 |
| TraesCS7A01G539600.1 | Wheat | nucleus | 5.13 | 4.14 |
| TraesCSU01G179800.1 | Wheat | nucleus, plastid | 0.73 | 0.6 |
| TraesCSU01G196300.1 | Wheat | nucleus, plastid | 0.73 | 0.6 |
Protein Annotations
| Gene3D:1.10.10.60 | Gene3D:3.40.50.2300 | MapMan:35.1 | EnsemblPlantsGene:Bra037427 | EnsemblPlants:Bra037427.1 | EnsemblPlants:Bra037427.1-P |
| InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:IPR001789 | UniProt:M4F8L5 | InterPro:Myb_dom_plants | PFAM:PF00072 |
| PFscan:PS50110 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF32 | SMART:SM00448 | SUPFAM:SSF46689 | SUPFAM:SSF52172 |
| InterPro:Sig_transdc_resp-reg_receiver | TIGRFAMs:TIGR01557 | UniParc:UPI000253F9FE | SEG:seg | : | : |
Description
AT5G49240 (E=5e-063) APRR4, PRR4 | APRR4 (PSEUDO-RESPONSE REGULATOR 4); transcription factor/ two-component response regulator
Coordinates
chrA06:+:21516600..21520090
Molecular Weight (calculated)
31449.4 Da
IEP (calculated)
5.491
GRAVY (calculated)
-0.660
Length
273 amino acids
Sequence
(BLAST)
(BLAST)
001: MLQKWKPSGD ESGGPDRDLP NSRDMFSGNF PEGLRVLLFD EDRIYLQILE KHLEEFQYEV TTCHEEERAT YLLCNHRNMF DIAIIEAHNL EGKIFRLISE
101: IRSEIDIPII ITSQDDSRES VTKWMRNGAC DYLIKPIRPE DLRLIYKYLV KKMELRGITV AEEAEEKAAA EKSSSVGDST IRSPNRRKRN MLQTDEDPDH
201: NRDSATKKRR VVWDDYLNGK FLDAVNSLGN NDVVPKKILE RMNVSSLTRE NVASHLQITT GLGSDLCPPR NPI
101: IRSEIDIPII ITSQDDSRES VTKWMRNGAC DYLIKPIRPE DLRLIYKYLV KKMELRGITV AEEAEEKAAA EKSSSVGDST IRSPNRRKRN MLQTDEDPDH
201: NRDSATKKRR VVWDDYLNGK FLDAVNSLGN NDVVPKKILE RMNVSSLTRE NVASHLQITT GLGSDLCPPR NPI
001: MQPLNMAEIL DHRGVLTDGD DGPFRNLTNF YDMFSSNFPE GLRVLVFDED PSYLLILERH LQKFQYQVTI CNEVNKAMHT LRNHRNRFDL AMIQVNNAEG
101: DIFRFLSEIG SEMDLPIIII SEDDSVKSVK KWMINGAADY LIKPIRPEDL RIVFKHLVKK MRERRSVVTG EAEKAAGEKS SSVGDSTIRN PNKSKRSSCL
201: EAEVNEEDRH DHNDRACASS AKKRRVVWDE ELHQNFLNAV DFLGLERAVP KKILDVMKVD YISRENVASH LQVTFLIYNI IVHFQQHFCF YS
101: DIFRFLSEIG SEMDLPIIII SEDDSVKSVK KWMINGAADY LIKPIRPEDL RIVFKHLVKK MRERRSVVTG EAEKAAGEKS SSVGDSTIRN PNKSKRSSCL
201: EAEVNEEDRH DHNDRACASS AKKRRVVWDE ELHQNFLNAV DFLGLERAVP KKILDVMKVD YISRENVASH LQVTFLIYNI IVHFQQHFCF YS
Arabidopsis Description
APRR4Putative two-component response regulator-like APRR4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ16]
SUBAcon: [cytoskeleton,nucleus,cytosol]
SUBAcon: [cytoskeleton,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.