Subcellular Localization
min:
: max
Winner_takes_all: cytoskeleton, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytoskeleton 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86245 | Canola | nucleus | 53.77 | 57.51 |
| Bra037427.1-P | Field mustard | nucleus | 53.77 | 57.51 |
| CDY56439 | Canola | nucleus | 54.11 | 57.45 |
| CDY33920 | Canola | nucleus | 52.05 | 35.1 |
| Bra020652.1-P | Field mustard | nucleus | 52.05 | 34.47 |
| CDY05641 | Canola | nucleus | 52.4 | 34.3 |
| VIT_11s0052g01160.t01 | Wine grape | cytosol | 22.95 | 31.02 |
| Zm00001d032784_P001 | Maize | nucleus | 28.08 | 24.33 |
| GSMUA_Achr5P13050_001 | Banana | cytosol | 18.49 | 23.58 |
| AT2G01760.2 | Thale cress | nucleus | 32.53 | 23.17 |
| KXG38401 | Sorghum | nucleus | 26.37 | 22.19 |
| AT1G67710.1 | Thale cress | nucleus | 31.51 | 17.66 |
| AT4G31920.1 | Thale cress | nucleus | 32.53 | 17.21 |
| PGSC0003DMT400090747 | Potato | nucleus | 31.51 | 16.46 |
| Solyc12g099380.1.1 | Tomato | nucleus | 30.48 | 16.04 |
| AT3G16857.2 | Thale cress | nucleus | 37.33 | 15.8 |
| Os10t0463400-01 | Rice | nucleus | 18.15 | 15.54 |
| AT2G25180.1 | Thale cress | nucleus | 31.16 | 15.27 |
| VIT_07s0005g01010.t01 | Wine grape | nucleus | 27.74 | 15.17 |
| AT2G40970.1 | Thale cress | nucleus | 12.67 | 14.92 |
| AT3G62670.1 | Thale cress | nucleus | 21.58 | 14.79 |
| AT5G58080.1 | Thale cress | nucleus | 31.51 | 14.49 |
| AT5G59570.2 | Thale cress | nucleus | 14.38 | 14.09 |
| AT5G05090.1 | Thale cress | nucleus | 12.67 | 13.91 |
| AT5G07210.1 | Thale cress | nucleus | 26.03 | 12.24 |
| AT2G27070.1 | Thale cress | nucleus | 23.63 | 12.06 |
| AT3G46640.3 | Thale cress | nucleus | 13.36 | 12.04 |
| AT1G49190.2 | Thale cress | nucleus | 25.34 | 11.9 |
| AT3G10760.1 | Thale cress | nucleus | 13.36 | 11.64 |
| KRH60425 | Soybean | nucleus | 13.01 | 10.56 |
| TraesCS7A01G539600.1 | Wheat | nucleus | 4.11 | 3.55 |
| TraesCSU01G179800.1 | Wheat | nucleus, plastid | 0.34 | 0.3 |
| TraesCSU01G196300.1 | Wheat | nucleus, plastid | 0.34 | 0.3 |
Protein Annotations
| Gene3D:1.10.10.60 | Gene3D:3.40.50.2300 | MapMan:35.1 | EntrezGene:834984 | UniProt:A0A178UBX4 | ProteinID:AED95788.1 |
| Symbol:APRR4 | ArrayExpress:AT5G49240 | EnsemblPlantsGene:AT5G49240 | RefSeq:AT5G49240 | TAIR:AT5G49240 | RefSeq:AT5G49240-TAIR-G |
| EnsemblPlants:AT5G49240.1 | TAIR:AT5G49240.1 | Unigene:At.55447 | ProteinID:BAB10342.1 | InterPro:CheY-like_superfamily | GO:GO:0000160 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:Homeobox-like_sf | InterPro:IPR001789 | InterPro:Myb_dom_plants | RefSeq:NP_199735.1 | ProteinID:OAO90714.1 | PFAM:PF00072 |
| PFscan:PS50110 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF27 | UniProt:Q9FJ16 | SMART:SM00448 | SUPFAM:SSF46689 |
| SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | TIGRFAMs:TIGR01557 | UniParc:UPI00000A354C | : | : |
Description
APRR4Putative two-component response regulator-like APRR4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ16]
Coordinates
chr5:+:19962934..19964351
Molecular Weight (calculated)
33819.4 Da
IEP (calculated)
6.588
GRAVY (calculated)
-0.414
Length
292 amino acids
Sequence
(BLAST)
(BLAST)
001: MQPLNMAEIL DHRGVLTDGD DGPFRNLTNF YDMFSSNFPE GLRVLVFDED PSYLLILERH LQKFQYQVTI CNEVNKAMHT LRNHRNRFDL AMIQVNNAEG
101: DIFRFLSEIG SEMDLPIIII SEDDSVKSVK KWMINGAADY LIKPIRPEDL RIVFKHLVKK MRERRSVVTG EAEKAAGEKS SSVGDSTIRN PNKSKRSSCL
201: EAEVNEEDRH DHNDRACASS AKKRRVVWDE ELHQNFLNAV DFLGLERAVP KKILDVMKVD YISRENVASH LQVTFLIYNI IVHFQQHFCF YS
101: DIFRFLSEIG SEMDLPIIII SEDDSVKSVK KWMINGAADY LIKPIRPEDL RIVFKHLVKK MRERRSVVTG EAEKAAGEKS SSVGDSTIRN PNKSKRSSCL
201: EAEVNEEDRH DHNDRACASS AKKRRVVWDE ELHQNFLNAV DFLGLERAVP KKILDVMKVD YISRENVASH LQVTFLIYNI IVHFQQHFCF YS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.