Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra041027.1-P | Field mustard | nucleus | 54.46 | 55.24 |
| CDX76652 | Canola | nucleus | 54.23 | 55.13 |
| CDY11437 | Canola | nucleus | 53.76 | 54.52 |
| VIT_11s0052g01160.t01 | Wine grape | cytosol | 15.26 | 30.09 |
| GSMUA_Achr5P13050_001 | Banana | cytosol | 13.38 | 24.89 |
| Zm00001d032784_P001 | Maize | nucleus | 19.48 | 24.63 |
| KXG38401 | Sorghum | nucleus | 19.95 | 24.5 |
| AT1G49190.2 | Thale cress | nucleus | 34.74 | 23.79 |
| AT5G49240.1 | Thale cress | cytoskeleton, cytosol, nucleus | 14.79 | 21.58 |
| AT2G01760.2 | Thale cress | nucleus | 19.95 | 20.73 |
| VIT_07s0005g01010.t01 | Wine grape | nucleus | 23.47 | 18.73 |
| AT2G40970.1 | Thale cress | nucleus | 10.33 | 17.74 |
| Os10t0463400-01 | Rice | nucleus | 14.08 | 17.6 |
| AT4G31920.1 | Thale cress | nucleus | 22.3 | 17.21 |
| AT1G67710.1 | Thale cress | nucleus | 20.66 | 16.89 |
| PGSC0003DMT400090747 | Potato | nucleus | 21.83 | 16.64 |
| Solyc12g099380.1.1 | Tomato | nucleus | 21.13 | 16.22 |
| AT5G05090.1 | Thale cress | nucleus | 10.09 | 16.17 |
| AT2G25180.1 | Thale cress | nucleus | 22.54 | 16.11 |
| AT3G16857.2 | Thale cress | nucleus | 25.12 | 15.51 |
| AT5G59570.2 | Thale cress | nucleus | 10.8 | 15.44 |
| AT3G46640.3 | Thale cress | nucleus | 11.27 | 14.81 |
| AT5G58080.1 | Thale cress | nucleus | 21.13 | 14.17 |
| AT2G27070.1 | Thale cress | nucleus | 17.14 | 12.76 |
| AT5G07210.1 | Thale cress | nucleus | 18.31 | 12.56 |
| AT3G10760.1 | Thale cress | nucleus | 9.62 | 12.24 |
| TraesCS7A01G539600.1 | Wheat | nucleus | 3.52 | 4.44 |
| TraesCSU01G179800.1 | Wheat | nucleus, plastid | 0.94 | 1.21 |
| TraesCSU01G196300.1 | Wheat | nucleus, plastid | 0.94 | 1.21 |
Protein Annotations
| Gene3D:1.10.10.60 | Gene3D:3.40.50.2300 | MapMan:35.1 | EntrezGene:825441 | ProteinID:AEE80378.2 | Symbol:ARR20 |
| ArrayExpress:AT3G62670 | EnsemblPlantsGene:AT3G62670 | RefSeq:AT3G62670 | TAIR:AT3G62670 | RefSeq:AT3G62670-TAIR-G | EnsemblPlants:AT3G62670.1 |
| TAIR:AT3G62670.1 | ProteinID:CAB83117.1 | InterPro:CheY-like_superfamily | GO:GO:0000003 | GO:GO:0000156 | GO:GO:0000160 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0004871 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009736 | GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009793 |
| GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:IPR001789 | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants |
| RefSeq:NP_001319821.1 | PFAM:PF00072 | PFAM:PF00249 | PIRSF:PIRSF036392 | PO:PO:0000036 | PO:PO:0005660 |
| PO:PO:0006079 | PFscan:PS50110 | PFscan:PS51294 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF23 | UniProt:Q9LZJ8 |
| InterPro:Response_reg_B-typ_pln | InterPro:SANT/Myb | SMART:SM00448 | SUPFAM:SSF46689 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver |
| TIGRFAMs:TIGR01557 | UniParc:UPI00000A6DF3 | SEG:seg | : | : | : |
Description
ARR20Putative two-component response regulator ARR20 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZJ8]
Coordinates
chr3:-:23176556..23178294
Molecular Weight (calculated)
48463.0 Da
IEP (calculated)
5.014
GRAVY (calculated)
-0.680
Length
426 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVFSNILDE NSRNLRNEIP CDDGIASPIN DDDEEFLTKS NRVLLVGADS NSSLKNLMTQ YSYQVTKYES GEEAMAFLMK NKHEIDLVIW DFHMPDINGL
101: DALNIIGKQM DLPVVIMSHE YKKETVMESI KYGACDFLVK PVSKEVIAVL WRHVYRKRMS KSGLDKPGES GTVESDPDEY DDLEQDNLYE SNEEGSKNTC
201: DHKEEKSPTK KPRMQWTPEL HHKFEVAVEK MGSLEKAFPK TILKYMQEEL NVQGLTRNNV ASHLQKYRQS SKKTCTPQEP QEDFVWGNAG PDVTLAASKT
301: LLSSHATPSY LINNQAAPRG SYFMNNIPYP STSCLPVNNN NCFMTNPSTY IDQFQHQLQQ QQQHQQYQST LNSISAMLTK QESRHVPSSA MENSEPLMIY
401: NSNLPFGIDE CFPPAGFNIF DQIGHN
101: DALNIIGKQM DLPVVIMSHE YKKETVMESI KYGACDFLVK PVSKEVIAVL WRHVYRKRMS KSGLDKPGES GTVESDPDEY DDLEQDNLYE SNEEGSKNTC
201: DHKEEKSPTK KPRMQWTPEL HHKFEVAVEK MGSLEKAFPK TILKYMQEEL NVQGLTRNNV ASHLQKYRQS SKKTCTPQEP QEDFVWGNAG PDVTLAASKT
301: LLSSHATPSY LINNQAAPRG SYFMNNIPYP STSCLPVNNN NCFMTNPSTY IDQFQHQLQQ QQQHQQYQST LNSISAMLTK QESRHVPSSA MENSEPLMIY
401: NSNLPFGIDE CFPPAGFNIF DQIGHN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.