Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G07210.1 | Thale cress | nucleus | 84.97 | 78.26 |
| CDX98997 | Canola | nucleus | 62.94 | 60.1 |
| CDX81041 | Canola | nucleus | 59.44 | 60.07 |
| CDY67763 | Canola | nucleus | 62.24 | 59.93 |
| CDX70016 | Canola | nucleus | 62.41 | 59.5 |
| CDX78284 | Canola | nucleus | 58.39 | 58.8 |
| Bra005928.1-P | Field mustard | nucleus | 64.69 | 48.75 |
| Bra009284.1-P | Field mustard | nucleus | 61.54 | 45.54 |
| Bra028705.1-P | Field mustard | nucleus | 61.01 | 45.5 |
| CDY14053 | Canola | nucleus | 57.87 | 44.25 |
| Solyc11g072330.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 15.91 | 27.58 |
| PGSC0003DMT400035788 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 9.79 | 25.81 |
| AT5G49240.1 | Thale cress | cytoskeleton, cytosol, nucleus | 12.06 | 23.63 |
| Solyc03g026250.1.1 | Tomato | nucleus | 13.46 | 23.12 |
| AT2G01760.2 | Thale cress | nucleus | 15.73 | 21.95 |
| Solyc07g019550.1.1 | Tomato | nucleus | 13.64 | 21.25 |
| AT4G31920.1 | Thale cress | nucleus | 18.53 | 19.2 |
| KRH09142 | Soybean | nucleus | 22.2 | 18.98 |
| AT5G59570.2 | Thale cress | nucleus | 9.62 | 18.46 |
| VIT_16s0100g00420.t01 | Wine grape | nucleus | 18.71 | 18.07 |
| AT2G25180.1 | Thale cress | nucleus | 18.53 | 17.79 |
| AT5G05090.1 | Thale cress | nucleus | 8.22 | 17.67 |
| KRH38615 | Soybean | nucleus | 16.26 | 17.61 |
| AT1G67710.1 | Thale cress | nucleus | 15.73 | 17.27 |
| AT3G62670.1 | Thale cress | nucleus | 12.76 | 17.14 |
| AT2G40970.1 | Thale cress | nucleus | 7.34 | 16.94 |
| AT3G16857.2 | Thale cress | nucleus | 19.93 | 16.52 |
| AT3G46640.3 | Thale cress | nucleus | 9.27 | 16.36 |
| VIT_16s0100g00430.t01 | Wine grape | nucleus | 14.16 | 16.3 |
| AT3G10760.1 | Thale cress | nucleus | 8.39 | 14.33 |
| AT1G49190.2 | Thale cress | nucleus | 15.38 | 14.15 |
| AT5G58080.1 | Thale cress | nucleus | 15.21 | 13.7 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:11.4.2.4 | MapMan:15.5.23 | Gene3D:3.40.50.2300 | EntrezGene:817249 | ProteinID:AAC77865.1 |
| ProteinID:AEC07932.2 | Symbol:ARR13 | ArrayExpress:AT2G27070 | EnsemblPlantsGene:AT2G27070 | RefSeq:AT2G27070 | TAIR:AT2G27070 |
| RefSeq:AT2G27070-TAIR-G | EnsemblPlants:AT2G27070.1 | TAIR:AT2G27070.1 | Unigene:At.52931 | InterPro:CheY-like_superfamily | GO:GO:0000160 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 |
| GO:GO:0009736 | GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:IPR001789 | InterPro:Myb_dom_plants | RefSeq:NP_001318296.1 |
| PFAM:PF00072 | PIRSF:PIRSF036392 | PO:PO:0000036 | PO:PO:0004723 | PO:PO:0005660 | PFscan:PS50110 |
| PANTHER:PTHR43874 | PANTHER:PTHR43874:SF19 | UniProt:Q9ZVD3 | InterPro:Response_reg_B-typ_pln | SMART:SM00448 | SUPFAM:SSF46689 |
| SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | TIGRFAMs:TIGR01557 | UniParc:UPI00003BF79B | SEG:seg | : |
Description
ARR13Putative two-component response regulator ARR13 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVD3]
Coordinates
chr2:-:11556392..11560215
Molecular Weight (calculated)
65047.2 Da
IEP (calculated)
7.315
GRAVY (calculated)
-0.769
Length
572 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFAQSVYNQ SSVLKINVMV VDDNRVFLDI WSRMLEKSKY REITVIAVDY PKKALSTLKN QRDNIDLIIT DYYMPGMNGL QLKKQITQEF GNLSVLVMSS
101: DPNKEEESLS CGAMGFIPKP IAPTDLPKIY QFALTYKRNG KSTLSTEQNQ KDANVSVPQQ IMLVPEQAYV LKTKKKNCSS KSDTRTVNST NVSHVSTNGS
201: RKNRKRKPKG GPSDDGESLS QPPKKKKIWW TNPLQDLFLQ AIQHIGYDKV VPKKILAIMN VPYLTRENVA SHLQKYRLFV KRVVHQGRFS MLSDRGKDSM
301: FRQTHIKEPY VNYYTPSTSW YETSLNNRSF YSESVHGHSR LLSEAREPVR YNQMSYNYMN RNISFENQPS QNEETRTVFE PPVMANKISQ TSQVLGFGQL
401: GPSAISGHNF NTNMMSSYGS LTPNQPGTSH FSYGMQSVLN NENATYNPQP PANATTQPNL DELPQLENLN LYNDLGNTSE LPYNISNFQS DDNKKQGEED
501: GDWTFVNINQ DQSNGESSNT IATPETNTPN FNINPNQNQG QAVPEFTDWS FLDQQELVDD DFMNSLFNND MN
101: DPNKEEESLS CGAMGFIPKP IAPTDLPKIY QFALTYKRNG KSTLSTEQNQ KDANVSVPQQ IMLVPEQAYV LKTKKKNCSS KSDTRTVNST NVSHVSTNGS
201: RKNRKRKPKG GPSDDGESLS QPPKKKKIWW TNPLQDLFLQ AIQHIGYDKV VPKKILAIMN VPYLTRENVA SHLQKYRLFV KRVVHQGRFS MLSDRGKDSM
301: FRQTHIKEPY VNYYTPSTSW YETSLNNRSF YSESVHGHSR LLSEAREPVR YNQMSYNYMN RNISFENQPS QNEETRTVFE PPVMANKISQ TSQVLGFGQL
401: GPSAISGHNF NTNMMSSYGS LTPNQPGTSH FSYGMQSVLN NENATYNPQP PANATTQPNL DELPQLENLN LYNDLGNTSE LPYNISNFQS DDNKKQGEED
501: GDWTFVNINQ DQSNGESSNT IATPETNTPN FNINPNQNQG QAVPEFTDWS FLDQQELVDD DFMNSLFNND MN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.