Skip to main content
crop-pal logo
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY67763 Canola nucleus 74.97 96.8
AT5G07210.1 Thale cress nucleus 51.37 63.45
Bra005928.1-P Field mustard nucleus 61.8 62.45
AT2G27070.1 Thale cress nucleus 45.5 61.01
Bra009284.1-P Field mustard nucleus 61.41 60.93
Bra001378.1-P Field mustard nucleus 5.22 40.82
Bra001377.1-P Field mustard nucleus 5.48 31.11
Bra001641.1-P Field mustard cytosol 5.87 30.41
PGSC0003DMT400035788 Potato cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole 8.21 29.03
Solyc11g072330.1.1 Tomato cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole 12.39 28.79
Bra037427.1-P Field mustard nucleus 9.65 27.11
Bra026635.1-P Field mustard nucleus 12.65 25.73
Solyc03g026250.1.1 Tomato nucleus 10.82 24.92
Solyc07g019550.1.1 Tomato nucleus 11.47 23.98
Bra023972.1-P Field mustard nucleus 14.6 21.62
Bra005837.1-P Field mustard nucleus 6.65 20.32
Bra009087.1-P Field mustard nucleus 7.04 20.22
Bra033527.1-P Field mustard nucleus 16.56 20.06
Bra020652.1-P Field mustard nucleus 11.34 19.73
Bra012743.1-P Field mustard nucleus 15.12 19.59
Bra029866.1-P Field mustard nucleus 7.3 19.58
Bra001643.1-P Field mustard nucleus 16.3 19.23
Bra033809.1-P Field mustard nucleus 7.04 18.95
KRH09142 Soybean nucleus 16.43 18.83
Bra018204.1-P Field mustard nucleus 7.43 18.75
Bra022183.1-P Field mustard nucleus 16.43 18.5
Bra014172.1-P Field mustard nucleus 10.82 18.49
Bra032035.1-P Field mustard nucleus 13.82 18.24
Bra004593.1-P Field mustard nucleus 5.87 18.22
Bra004245.1-P Field mustard nucleus 12.13 18.16
Bra004076.1-P Field mustard nucleus 11.99 18.07
VIT_16s0100g00420.t01 Wine grape nucleus 13.82 17.91
Bra041027.1-P Field mustard nucleus 9.78 17.86
Bra034144.1-P Field mustard nucleus 7.43 17.54
KRH38615 Soybean nucleus 11.34 16.48
Bra032275.1-P Field mustard nucleus 10.82 16.44
VIT_16s0100g00430.t01 Wine grape nucleus 10.43 16.1
Bra020390.1-P Field mustard nucleus 13.04 16.05
Protein Annotations
Gene3D:1.10.10.60MapMan:11.4.2.4MapMan:15.5.23Gene3D:3.40.50.2300EnsemblPlantsGene:Bra028705EnsemblPlants:Bra028705.1
EnsemblPlants:Bra028705.1-PInterPro:CheY-like_superfamilyGO:GO:0000160GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139
GO:GO:0006351GO:GO:0006355GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009987InterPro:Homeobox-like_sfInterPro:IPR001789UniProt:M4EIU0InterPro:Myb_dom_plants
PFAM:PF00072PFscan:PS50110PANTHER:PTHR43874PANTHER:PTHR43874:SF19SMART:SM00448SUPFAM:SSF46689
SUPFAM:SSF52172InterPro:Sig_transdc_resp-reg_receiverTIGRFAMs:TIGR01557UniParc:UPI00025431EDSEG:seg:
Description
AT2G27070 (E=4e-136) ARR13 | ARR13 (ARABIDOPSIS RESPONSE REGULATOR 13); transcription factor/ two-component response regulator
Coordinates
chrA02:+:2458975..2464634
Molecular Weight (calculated)
84890.7 Da
IEP (calculated)
7.369
GRAVY (calculated)
-0.751
Length
767 amino acids
Sequence
(BLAST)
001: MTFAQSLNNQ SSVLRINIMV VDDDPVSREI VSRMLERSKY RDPSMEITVI AVRDAREALS TLKIQRNNID LIVTDYYMPG MNGLQLKQQI TRQFGNFPVI
101: VMSSDTNKEQ ESLACGSVCF LPKPIKPTDL PKIYQVAFTY KRKGKSISRT EHNHMDTNVS IPQQIQLLPE QANVSKTKKN KEFSSKSDSR SVNSFNGSCD
201: STDGSRKNRK RKSNGDFGDD DESLPQPSKK SKLSWSDYLH DLFLQAIHHI GLDKAVPKKI LEFMDVSYLT RENVASHLQK YRNFLRKVAE NSGMLHGRGM
301: EPYHSNYTTS SSWYDTGLNN KSSYSKPRHG LGQSRLLSNT CEPVRFNQMP YNHMNRLSTY EPHRTGSNLT MPIKSNLSFS TQPLQNEGSR SFLEPTVTAN
401: KTGQTSQVLG FGQHGMLAIN GNNFNDNTMS SYASSTSNQP RINSHGSSTP NQPGLRSYGC SISNQPGMSS YASVSPNQLG MSSYGSLTPY QRGMSSLGSF
501: TPTQPGMSSH RSLTPTQQGM SSYGSLSPSQ PGVSTQPGMS SKGSLTPTQR GMSSYGSLTS YQPALSTHGS LFPNQPGISS HTSLPPTQPG MSSFGSLTTN
601: HSGMSSYESL TPTQPGPSNI SYGLLLNNEN TAYKPQPHAS TTIQLDNLSM YDDLGNINEI PCDLSNFDFD HDKQQEEAVS ANKFEIPANL ETELNQTSSL
701: EEDGDWTFLN ISQGHFNEKT SNTFAAPETN DPTFNKNPNH AQNLANENDF MDSMFTNDNS MFTNDMN
Best Arabidopsis Sequence Match ( AT5G07210.1 )
(BLAST)
001: MASAQSFYNQ SSVLKINVMV VDDDHVFLDI MSRMLQHSKY RDPSVMEIAV IAVDDPKKAL STLKIQRDNI DLIITDYYMP GMNGLQLKKQ ITQEFGNLPV
101: LVMSSDTNKE EESLSCGAMG FIPKPIHPTD LTKIYQFALS NKRNGKSTLS TEQNHKDADV SVPQQITLVP EQADVLKTKR KNCSFKSDSR TVNSTNGSCV
201: STDGSRKNRK RKPNGGPSDD GESMSQPAKK KKIQWTDSLH DLFLQAIRHI GLDKAVPKKI LAFMSVPYLT RENVASHLQK YRIFLRRVAE QGLYSMLSDR
301: GIDSMFRQTH IKEPYFNYYT PSTSWYDTRL NNRSFYSKPV HGFGQSKLLS TTREPVCFNQ MPYNYMNRSS TYEPHRIGSG SNLTLPIQSN LSFPNQPSQN
401: EERRSFFEPP VMANKIAQTS QVLGFGQLGP SAISGHNFNN NMTSRYGSLI PSQPGPSHFS YGMQSFLNNE NVTYNPQPPA NATTQPNLDE LPQLENLNLY
501: NDFGNTSELP YNISNFQFDD NKHQQGEADP TKFELPAAKF STELNHEDDG DWTFVNINQG QSNGETSNTI ASPETNTPIL NINHNQNQGQ DVPEFNDWSF
601: LDPQELVDDD FMNSLFNNDM N
Arabidopsis Description
ARR21response regulator 21 [Source:TAIR;Acc:AT5G07210]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.