Factsheet for Bra005837.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY52133	Canola	nucleus	97.21	97.6
CDX80940	Canola	nucleus	84.86	87.3
Bra009087.1-P	Field mustard	nucleus	82.47	77.53
Bra029866.1-P	Field mustard	nucleus	62.15	54.55
Bra034144.1-P	Field mustard	nucleus	65.74	50.77
VIT_08s0040g00900.t01	Wine grape	nucleus	61.75	50.65
Bra004593.1-P	Field mustard	nucleus	49.8	50.61
KRH71692	Soybean	nucleus	50.6	48.85
KRG95053	Soybean	nucleus	58.57	47.12
GSMUA_Achr11P...	Banana	nucleus	53.78	44.55
Bra001378.1-P	Field mustard	nucleus	17.13	43.88
GSMUA_Achr8P05880_001	Banana	nucleus	54.58	43.49
GSMUA_Achr5P27500_001	Banana	nucleus	48.61	42.96
Zm00001d010280_P001	Maize	nucleus	49.8	41.81
HORVU1Hr1G064950.1	Barley	nucleus	50.6	41.64
TraesCS1D01G257700.1	Wheat	nucleus	51.0	41.42
TraesCS1B01G268900.1	Wheat	nucleus	50.6	41.23
TraesCS1A01G258400.1	Wheat	nucleus	50.6	40.71
Zm00001d038191_P001	Maize	nucleus	50.6	40.71
Bra001377.1-P	Field mustard	nucleus	19.12	35.56
Bra033809.1-P	Field mustard	nucleus	35.86	31.58
Os05t0412000-00	Rice	nucleus	51.79	31.48
Bra018204.1-P	Field mustard	nucleus	37.45	30.92
Bra026635.1-P	Field mustard	nucleus	20.32	13.53
Bra037427.1-P	Field mustard	nucleus	13.94	12.82
Bra041027.1-P	Field mustard	nucleus	19.12	11.43
Bra032035.1-P	Field mustard	nucleus	24.3	10.5
Bra023972.1-P	Field mustard	nucleus	20.72	10.04
Bra020652.1-P	Field mustard	nucleus	17.53	9.98
Bra004076.1-P	Field mustard	nucleus	19.52	9.63
Bra012743.1-P	Field mustard	nucleus	22.31	9.46
Bra004245.1-P	Field mustard	nucleus	19.12	9.38
Bra020390.1-P	Field mustard	nucleus	23.11	9.31
Bra001643.1-P	Field mustard	nucleus	22.71	8.77
Bra014172.1-P	Field mustard	nucleus	15.54	8.69
Bra022183.1-P	Field mustard	nucleus	23.51	8.66
Bra033527.1-P	Field mustard	nucleus	21.12	8.37
Bra032275.1-P	Field mustard	nucleus	15.14	7.52
Bra028705.1-P	Field mustard	nucleus	20.32	6.65
Bra009284.1-P	Field mustard	nucleus	19.92	6.47
Bra005928.1-P	Field mustard	nucleus	18.33	6.06
Bra001641.1-P	Field mustard	cytosol	2.39	4.05

Protein Annotations

Gene3D:1.10.10.60	MapMan:35.1	EnsemblPlantsGene:Bra005837	EnsemblPlants:Bra005837.1	EnsemblPlants:Bra005837.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M4CNP9	InterPro:Myb_dom
InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR31442	PANTHER:PTHR31442:SF1	InterPro:SANT/Myb
SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI000253FC5F	SEG:seg	:	:

Description

AT5G05090 (E=2e-085) | myb family transcription factor

Coordinates

chrA03:+:866220..866975

Molecular Weight (calculated)

28065.4 Da

IEP (calculated)

9.997

GRAVY (calculated)

-0.511

Length

251 amino acids

Sequence
(BLAST)

001: MRDDEEEELP SPEELIPLSQ SLITPHLAIA FDLRSTHHRK NGSSGHPLPQ TTPTQANSSA GDEPARTLKR PRLVWTPQLH KRFVDAVAHL GIKNAVPKTI
101: MQLMSVEGLT RENVASHLQK YRLYLKRMQS GGGNVGESDR LFASSPVPAH FFHPTGRQSS DHFIPSFVPM AATLTHQQFL YRQTPAVNFT SQANNNGKVM
201: EQSLFLARQS QHQPVLIRPS SLHLQSRVAN YAEDLELGAK TVLTLFPTRQ D

Best Arabidopsis Sequence Match ( AT5G05090.1 )
(BLAST)

001: MREEDSNWFA KWEEELPSPE ELIPLSQSLI TPDLAIAFDL HRNNNSNSGQ PLPQTTPPQP NSSAEIAGDS TGDEPARTLK RPRLVWTPQL HKRFVDAVAH
101: LGIKNAVPKT IMQLMSVDGL TRENVASHLQ KYRLYLKRMK SGGGGGGSGD SDHLFASSPV PPHFLHPTSR QSSDLFIPSF VPISTQQQHI AAPPSQFLHR
201: QISAVNFTSP TKATDQAMFL ARQQSELQQP VFKPSSLHLH SQVANYTQDL KSGAKTVLTL FPTRDD

Arabidopsis Description

At5g05090 [Source:UniProtKB/TrEMBL;Acc:Q9FF65]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.