Factsheet for Bra005928.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78284	Canola	nucleus	74.44	99.47
CDX81041	Canola	nucleus	69.7	93.46
AT5G07210.1	Thale cress	nucleus	55.07	67.31
AT2G27070.1	Thale cress	nucleus	48.75	64.69
Bra009284.1-P	Field mustard	nucleus	65.35	64.17
Bra028705.1-P	Field mustard	nucleus	62.45	61.8
Bra001378.1-P	Field mustard	nucleus	4.35	33.67
Bra001641.1-P	Field mustard	cytosol	6.06	31.08
Solyc11g072330.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	12.78	29.39
Bra001377.1-P	Field mustard	nucleus	5.14	28.89
PGSC0003DMT400035788	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	7.91	27.65
Bra037427.1-P	Field mustard	nucleus	9.88	27.47
Solyc03g026250.1.1	Tomato	nucleus	11.46	26.13
Bra026635.1-P	Field mustard	nucleus	12.25	24.67
Solyc07g019550.1.1	Tomato	nucleus	11.46	23.71
Bra023972.1-P	Field mustard	nucleus	14.62	21.43
Bra033527.1-P	Field mustard	nucleus	17.39	20.85
Bra020652.1-P	Field mustard	nucleus	11.73	20.18
KRH09142	Soybean	nucleus	17.65	20.03
Bra032035.1-P	Field mustard	nucleus	15.15	19.79
VIT_16s0100g00420.t01	Wine grape	nucleus	15.41	19.76
Bra004076.1-P	Field mustard	nucleus	13.18	19.65
Bra014172.1-P	Field mustard	nucleus	11.59	19.6
Bra012743.1-P	Field mustard	nucleus	15.28	19.59
Bra041027.1-P	Field mustard	nucleus	10.8	19.52
Bra001643.1-P	Field mustard	nucleus	16.6	19.38
Bra004245.1-P	Field mustard	nucleus	12.78	18.95
Bra029866.1-P	Field mustard	nucleus	7.11	18.88
Bra022183.1-P	Field mustard	nucleus	16.73	18.65
Bra004593.1-P	Field mustard	nucleus	6.06	18.62
KRH38615	Soybean	nucleus	12.78	18.37
Bra005837.1-P	Field mustard	nucleus	6.06	18.33
Bra009087.1-P	Field mustard	nucleus	6.32	17.98
Bra018204.1-P	Field mustard	nucleus	7.11	17.76
Bra032275.1-P	Field mustard	nucleus	11.73	17.62
Bra033809.1-P	Field mustard	nucleus	6.59	17.54
Bra034144.1-P	Field mustard	nucleus	7.38	17.23
VIT_16s0100g00430.t01	Wine grape	nucleus	11.2	17.1
Bra020390.1-P	Field mustard	nucleus	13.31	16.21

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	EnsemblPlantsGene:Bra005928	EnsemblPlants:Bra005928.1
EnsemblPlants:Bra005928.1-P	InterPro:CheY-like_superfamily	ncoils:Coil	GO:GO:0000160	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR001789	UniProt:M4CNZ0
InterPro:Myb_dom_plants	PFAM:PF00072	PFscan:PS50110	PANTHER:PTHR43874	PANTHER:PTHR43874:SF19	SMART:SM00448
SUPFAM:SSF46689	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI000253F664	SEG:seg

Description

AT5G07210 (E=1e-175) ARR21 | ARR21 (ARABIDOPSIS RESPONSE REGULATOR 21); transcription factor/ two-component response regulator

Coordinates

chrA03:+:1266604..1270835

Molecular Weight (calculated)

85226.7 Da

IEP (calculated)

6.463

GRAVY (calculated)

-0.655

Length

759 amino acids

Sequence
(BLAST)

001: MAFAQSFDNQ SSDLRINVMV VDDDPVFLGV VSRMLEKFKY RDPSFKEISV IAVKDPIEAL STLKTQRHNI DLIVTDYYMP HMNGLQLKKQ ITREFGNIPV
101: IVMSSDSNIE HESLACGAKC FLPKPIRPTD IPQIYQVALT YKRNDKSILW TEHNYRDTDV SIPQQIQLHT EQANVLKTNN KRFSPISDSR PVNSSNGSYV
201: STDGSGENRK RKSNGGSGDD SRPLKKPKIK WTDCLHDLFL QAIRYIGLDK AVPKKILEYM NLPYLTRENI ASHLQKYRIF LRKVAEQGFS CSRMLPTKGI
301: DSIFLQAHLR DPCYNNYASS SSSLYDTTIN NRSFYSKPIQ SYGQSRLLSN TAEPVRFNQM PYNYMNRSST YEPRGIGSNL TIPTISNLSF PIQPSQNEGR
401: RSLFEPTVMA NKTVQTSQAM GFGQHGLSAI NGNSFNNNMV SSYGRLTPTQ PGMMSYENLT PSQPGVRSYV NSTFDQPGMN NQRSLTPDQQ GMRSYRSLTS
501: NQLGVNMNGS FSQTPNQPGM SSYGISTSNQ PRMNNHGSLT LDQQVMSSNG SLTSNQLGMS SHGSLYPNQP GLNSYGSVTY NARVNIHESL TPNQPGASNF
601: SYGMQMFLNN ENTTYKPQAH DNATTQPNLE IPTLENLSLC DELLCEISNF QIDHNKQQEE AVSTNKFELP ANFETELNQF FSLEENGDGN FVNINQGRSD
701: GETSNIVAAP ETNYPVFNMN PNHEQEQGVP GFVDWSSLDP KDFANEYDFV DSLLTNDMN

Best Arabidopsis Sequence Match ( AT5G07210.1 )
(BLAST)

001: MASAQSFYNQ SSVLKINVMV VDDDHVFLDI MSRMLQHSKY RDPSVMEIAV IAVDDPKKAL STLKIQRDNI DLIITDYYMP GMNGLQLKKQ ITQEFGNLPV
101: LVMSSDTNKE EESLSCGAMG FIPKPIHPTD LTKIYQFALS NKRNGKSTLS TEQNHKDADV SVPQQITLVP EQADVLKTKR KNCSFKSDSR TVNSTNGSCV
201: STDGSRKNRK RKPNGGPSDD GESMSQPAKK KKIQWTDSLH DLFLQAIRHI GLDKAVPKKI LAFMSVPYLT RENVASHLQK YRIFLRRVAE QGLYSMLSDR
301: GIDSMFRQTH IKEPYFNYYT PSTSWYDTRL NNRSFYSKPV HGFGQSKLLS TTREPVCFNQ MPYNYMNRSS TYEPHRIGSG SNLTLPIQSN LSFPNQPSQN
401: EERRSFFEPP VMANKIAQTS QVLGFGQLGP SAISGHNFNN NMTSRYGSLI PSQPGPSHFS YGMQSFLNNE NVTYNPQPPA NATTQPNLDE LPQLENLNLY
501: NDFGNTSELP YNISNFQFDD NKHQQGEADP TKFELPAAKF STELNHEDDG DWTFVNINQG QSNGETSNTI ASPETNTPIL NINHNQNQGQ DVPEFNDWSF
601: LDPQELVDDD FMNSLFNNDM N

Arabidopsis Description

ARR21response regulator 21 [Source:TAIR;Acc:AT5G07210]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.