Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX77263 | Canola | nucleus | 38.1 | 52.67 |
| CDY16482 | Canola | nucleus | 36.66 | 51.82 |
| Bra014172.1-P | Field mustard | nucleus | 36.66 | 50.78 |
| CDY29358 | Canola | nucleus | 35.21 | 43.37 |
| Bra032275.1-P | Field mustard | nucleus | 35.21 | 43.37 |
| CDY04335 | Canola | nucleus | 33.76 | 39.77 |
| AT3G62670.1 | Thale cress | nucleus | 23.79 | 34.74 |
| VIT_11s0052g01160.t01 | Wine grape | cytosol | 11.09 | 31.94 |
| AT5G49240.1 | Thale cress | cytoskeleton, cytosol, nucleus | 11.9 | 25.34 |
| GSMUA_Achr5P13050_001 | Banana | cytosol | 9.0 | 24.45 |
| Zm00001d032784_P001 | Maize | nucleus | 13.18 | 24.33 |
| KXG38401 | Sorghum | nucleus | 13.18 | 23.63 |
| AT2G01760.2 | Thale cress | nucleus | 14.79 | 22.44 |
| Os10t0463400-01 | Rice | nucleus | 10.77 | 19.65 |
| VIT_07s0005g01010.t01 | Wine grape | nucleus | 16.56 | 19.29 |
| Solyc12g099380.1.1 | Tomato | nucleus | 17.04 | 19.1 |
| AT1G67710.1 | Thale cress | nucleus | 15.92 | 19.0 |
| PGSC0003DMT400090747 | Potato | nucleus | 16.72 | 18.6 |
| AT4G31920.1 | Thale cress | nucleus | 16.08 | 18.12 |
| AT2G25180.1 | Thale cress | nucleus | 16.56 | 17.28 |
| AT3G16857.2 | Thale cress | nucleus | 18.01 | 16.23 |
| AT2G40970.1 | Thale cress | nucleus | 6.43 | 16.13 |
| AT5G59570.2 | Thale cress | nucleus | 7.56 | 15.77 |
| AT2G27070.1 | Thale cress | nucleus | 14.15 | 15.38 |
| AT5G07210.1 | Thale cress | nucleus | 14.95 | 14.98 |
| AT5G58080.1 | Thale cress | nucleus | 14.31 | 14.02 |
| AT3G46640.3 | Thale cress | nucleus | 7.23 | 13.89 |
| AT5G05090.1 | Thale cress | nucleus | 5.79 | 13.53 |
| AT3G10760.1 | Thale cress | nucleus | 5.79 | 10.75 |
| TraesCS7A01G539600.1 | Wheat | nucleus | 2.41 | 4.44 |
| TraesCSU01G179800.1 | Wheat | nucleus, plastid | 0.8 | 1.51 |
| TraesCSU01G196300.1 | Wheat | nucleus, plastid | 0.8 | 1.51 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:11.4.2.4 | MapMan:15.5.23 | Gene3D:3.40.50.2300 | EntrezGene:841342 | Symbol:ARR19 |
| ArrayExpress:AT1G49190 | EnsemblPlantsGene:AT1G49190 | RefSeq:AT1G49190 | TAIR:AT1G49190 | RefSeq:AT1G49190-TAIR-G | EnsemblPlants:AT1G49190.2 |
| TAIR:AT1G49190.2 | Unigene:At.52089 | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:IPR001789 | InterPro:Myb_dom_plants |
| PFAM:PF00072 | PO:PO:0000282 | PFscan:PS50110 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF23 | Symbol:RR19 |
| SMART:SM00448 | SUPFAM:SSF46689 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | TIGRFAMs:TIGR01557 | UniParc:UPI0001E92AFB |
| SEG:seg | : | : | : | : | : |
Description
RR19response regulator 19 [Source:TAIR;Acc:AT1G49190]
Coordinates
chr1:+:18191267..18193782
Molecular Weight (calculated)
70843.9 Da
IEP (calculated)
5.024
GRAVY (calculated)
-0.600
Length
622 amino acids
Sequence
(BLAST)
(BLAST)
001: MLVGKISGYE DNTRSLERET SEITSLLSQF PGNTNVLVVD TNFTTLLNMK QIMKQYAYQV SIETDAEKAL AFLTSCKHEI NIVIWDFHMP GIDGLQALKS
101: ITSKLDLPVV IMSDDNQTES VMKATFYGAC DYVVKPVKEE VMANIWQHIV RKRLIFKPDV APPVQSDPAR SDRLDQVKAD FKIVEDEPII NETPLITWTE
201: EIQPVQSDLV QANKFDQVNG YSPIMNQDNM FNKAPPKPRM TWTEVIQPVQ SNLVQTKEFG QLNDYSQIMN QDSMYNKAAT KPQLTWTEEI QPVQSGLVQA
301: NEFSKVNGYS QSMNQDSMFN KSATNPRLTW NELLQPVQSD LVQSNEFSQF SDYSQIMNED NMFNKAAKKP RMTWSEVFQP VQSHLVPTDG LDRDHFDSIT
401: INGGNGIQNM EKKQGKKPRK PRMTWTEELH QKFLEAIEII GGIEKANPKV LVECLQEMRI EGITRSNVAS HLQVKKKTHT LNIKHRINLE ENQIPQQTQG
501: NGWATAYGTL APSLQGSDNV NTTIPSYLMN GPATLNQIQQ NQYQNGFLTM NNNQIITNPP PPLPYLDHHH QQQHQSSPQF NYLMNNEELL QASGLSATDL
601: ELTYPSLPYD PQEYLINGYN YN
101: ITSKLDLPVV IMSDDNQTES VMKATFYGAC DYVVKPVKEE VMANIWQHIV RKRLIFKPDV APPVQSDPAR SDRLDQVKAD FKIVEDEPII NETPLITWTE
201: EIQPVQSDLV QANKFDQVNG YSPIMNQDNM FNKAPPKPRM TWTEVIQPVQ SNLVQTKEFG QLNDYSQIMN QDSMYNKAAT KPQLTWTEEI QPVQSGLVQA
301: NEFSKVNGYS QSMNQDSMFN KSATNPRLTW NELLQPVQSD LVQSNEFSQF SDYSQIMNED NMFNKAAKKP RMTWSEVFQP VQSHLVPTDG LDRDHFDSIT
401: INGGNGIQNM EKKQGKKPRK PRMTWTEELH QKFLEAIEII GGIEKANPKV LVECLQEMRI EGITRSNVAS HLQVKKKTHT LNIKHRINLE ENQIPQQTQG
501: NGWATAYGTL APSLQGSDNV NTTIPSYLMN GPATLNQIQQ NQYQNGFLTM NNNQIITNPP PPLPYLDHHH QQQHQSSPQF NYLMNNEELL QASGLSATDL
601: ELTYPSLPYD PQEYLINGYN YN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.