Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G179800.1 | Wheat | nucleus, plastid | 99.4 | 99.4 |
| TraesCS7A01G539600.1 | Wheat | nucleus | 78.85 | 77.22 |
| TraesCSU01G105200.1 | Wheat | nucleus | 38.97 | 24.81 |
| TraesCSU01G040900.1 | Wheat | nucleus | 41.69 | 24.17 |
| KRH60425 | Soybean | nucleus | 3.93 | 3.61 |
| Solyc12g099380.1.1 | Tomato | nucleus | 5.74 | 3.42 |
| PGSC0003DMT400090747 | Potato | nucleus | 4.83 | 2.86 |
| CDY33920 | Canola | nucleus | 3.63 | 2.77 |
| Bra020652.1-P | Field mustard | nucleus | 3.63 | 2.72 |
| CDY05641 | Canola | nucleus | 3.32 | 2.47 |
| VIT_07s0005g01010.t01 | Wine grape | nucleus | 3.63 | 2.25 |
| CDY29358 | Canola | nucleus | 2.72 | 1.78 |
| Bra032275.1-P | Field mustard | nucleus | 2.72 | 1.78 |
| GSMUA_Achr5P13050_001 | Banana | cytosol | 1.21 | 1.75 |
| CDY11437 | Canola | nucleus | 2.11 | 1.67 |
| CDX76652 | Canola | nucleus | 1.81 | 1.43 |
| Bra041027.1-P | Field mustard | nucleus | 1.81 | 1.43 |
| CDY04335 | Canola | nucleus | 2.11 | 1.33 |
| CDY16482 | Canola | nucleus | 1.51 | 1.14 |
| Bra014172.1-P | Field mustard | nucleus | 1.51 | 1.11 |
| CDX77263 | Canola | nucleus | 1.51 | 1.11 |
| AT3G62670.1 | Thale cress | nucleus | 1.21 | 0.94 |
| AT1G49190.2 | Thale cress | nucleus | 1.51 | 0.8 |
| CDX86245 | Canola | nucleus | 0.6 | 0.73 |
| Bra037427.1-P | Field mustard | nucleus | 0.6 | 0.73 |
| CDY56439 | Canola | nucleus | 0.6 | 0.73 |
| Zm00001d032784_P001 | Maize | nucleus | 0.6 | 0.59 |
| VIT_11s0052g01160.t01 | Wine grape | cytosol | 0.3 | 0.46 |
| AT5G49240.1 | Thale cress | cytoskeleton, cytosol, nucleus | 0.3 | 0.34 |
| Os10t0463400-01 | Rice | nucleus | 0.3 | 0.29 |
| KXG38401 | Sorghum | nucleus | 0.3 | 0.29 |
Protein Annotations
| EnsemblPlants:TraesCSU01G196300.1 | EnsemblPlantsGene:TraesCSU01G196300 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chrUn:+:293896150..293897241
Molecular Weight (calculated)
36217.2 Da
IEP (calculated)
5.705
GRAVY (calculated)
-0.518
Length
331 amino acids
Sequence
(BLAST)
(BLAST)
001: MNNQGSFMRN HEHERWCTSS GLLSPNNFSA MGHLAQPANT HRNSCTGSFI HDGRMYKYVA PKLSDAGRFA RCIDPPANLY NNIPNETTLD EFPSYSFGDS
101: YAGRMRGKLV ETNKGKFPDP SYNSATHATL TGVLHRGIIS PISSNVNVEV QNEMGTVMRN ATSMAGFNEQ IVPKNAHSNQ SFVGMLNACG SRPVSLSEMV
201: KGGSSSIPVD GLSERMTPFN IAKNTSSIGM MLNENTAPGN SRISMTHTYM VNSGRNISTL SNHQTENVVA MTDKLDGQDA VSNHPMQVGT IGQHALNDQF
301: NDINDFSWDD FFLNPLDADF TIEDDLMGGE E
101: YAGRMRGKLV ETNKGKFPDP SYNSATHATL TGVLHRGIIS PISSNVNVEV QNEMGTVMRN ATSMAGFNEQ IVPKNAHSNQ SFVGMLNACG SRPVSLSEMV
201: KGGSSSIPVD GLSERMTPFN IAKNTSSIGM MLNENTAPGN SRISMTHTYM VNSGRNISTL SNHQTENVVA MTDKLDGQDA VSNHPMQVGT IGQHALNDQF
301: NDINDFSWDD FFLNPLDADF TIEDDLMGGE E
001: MADKLTDDQI TEYRESFRLF DKNGDGYITV NELRTTMRSL GETQTKAELQ DMINEADADG DGTISFSEFV CVMTGKMIDT QSKKETYRVV NQGQGQVQRH
101: TRNDRAGGTN WERDIAVGVA SNIIASPISD FMKDRFKDLF EALLS
101: TRNDRAGGTN WERDIAVGVA SNIIASPISD FMKDRFKDLF EALLS
Arabidopsis Description
CML12Calmodulin-like protein 12 [Source:UniProtKB/Swiss-Prot;Acc:P25071]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.