Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86925 | Canola | nucleus | 45.95 | 51.11 |
| CDX73905 | Canola | nucleus | 3.85 | 29.0 |
| CDX73907 | Canola | nucleus | 4.12 | 22.96 |
| CDX80940 | Canola | nucleus | 6.24 | 19.26 |
| CDY52133 | Canola | nucleus | 5.98 | 18.0 |
| CDY36273 | Canola | mitochondrion | 5.58 | 17.57 |
| CDX98816 | Canola | nucleus | 5.98 | 17.24 |
| CDY52720 | Canola | nucleus | 4.25 | 17.11 |
| CDY00969 | Canola | nucleus | 6.37 | 16.9 |
| CDY61256 | Canola | nucleus | 5.98 | 16.42 |
| CDX68392 | Canola | nucleus | 5.71 | 16.41 |
| CDX82988 | Canola | nucleus | 5.58 | 16.22 |
| CDY53674 | Canola | nucleus | 5.31 | 16.13 |
| CDX79963 | Canola | nucleus | 5.18 | 15.79 |
| CDX99104 | Canola | nucleus | 5.98 | 15.52 |
| Solyc11g072330.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 6.77 | 15.45 |
| Solyc07g019550.1.1 | Tomato | nucleus | 7.44 | 15.26 |
| CDX81041 | Canola | nucleus | 11.42 | 15.19 |
| KRH38615 | Soybean | nucleus | 10.62 | 15.15 |
| CDX78284 | Canola | nucleus | 11.29 | 14.96 |
| VIT_16s0100g00430.t01 | Wine grape | nucleus | 9.83 | 14.89 |
| CDY08579 | Canola | nucleus | 4.78 | 14.88 |
| CDY11437 | Canola | nucleus | 8.23 | 14.76 |
| CDX72337 | Canola | nucleus | 9.96 | 14.34 |
| CDX70016 | Canola | nucleus | 11.42 | 14.33 |
| CDX76652 | Canola | nucleus | 7.97 | 14.32 |
| CDX68803 | Canola | nucleus | 9.69 | 14.29 |
| CDY13465 | Canola | nucleus | 9.83 | 14.29 |
| CDX98997 | Canola | nucleus | 11.29 | 14.19 |
| CDY64566 | Canola | nucleus | 7.04 | 14.1 |
| CDY09419 | Canola | nucleus | 7.04 | 14.06 |
| CDY67763 | Canola | nucleus | 11.02 | 13.97 |
| CDY34423 | Canola | nucleus | 8.76 | 13.89 |
| CDY32209 | Canola | nucleus | 8.63 | 13.77 |
| KRH09142 | Soybean | nucleus | 12.22 | 13.75 |
| CDY70103 | Canola | nucleus | 10.36 | 13.52 |
| CDY14053 | Canola | nucleus | 13.41 | 13.5 |
| VIT_16s0100g00420.t01 | Wine grape | nucleus | 10.49 | 13.34 |
| CDY35371 | Canola | nucleus | 10.23 | 13.25 |
| CDY02794 | Canola | nucleus | 7.97 | 12.58 |
| CDX90546 | Canola | nucleus | 9.83 | 12.54 |
| CDY16482 | Canola | nucleus | 7.3 | 12.5 |
| CDY09718 | Canola | nucleus | 9.96 | 12.48 |
| CDX86245 | Canola | nucleus | 4.52 | 12.45 |
| CDY56439 | Canola | nucleus | 4.52 | 12.36 |
| CDY68249 | Canola | nucleus | 7.04 | 12.13 |
| Solyc03g026250.1.1 | Tomato | nucleus | 5.31 | 12.01 |
| CDX77263 | Canola | nucleus | 7.17 | 12.0 |
| CDX92102 | Canola | nucleus | 7.97 | 11.95 |
| CDX95898 | Canola | nucleus | 7.97 | 11.88 |
| CDY33920 | Canola | nucleus | 6.77 | 11.78 |
| CDX75892 | Canola | nucleus | 7.04 | 11.73 |
| CDX96070 | Canola | nucleus | 7.97 | 11.7 |
| CDY02793 | Canola | nucleus | 9.56 | 11.5 |
| CDX82389 | Canola | nucleus | 9.3 | 11.49 |
| CDY29358 | Canola | nucleus | 7.7 | 11.49 |
| CDY05641 | Canola | nucleus | 6.77 | 11.44 |
| CDY32725 | Canola | nucleus | 9.43 | 11.4 |
| CDY07410 | Canola | nucleus | 7.57 | 11.2 |
| CDY28869 | Canola | nucleus | 7.44 | 11.05 |
| CDY01838 | Canola | nucleus | 7.3 | 11.0 |
| CDY04335 | Canola | nucleus | 7.17 | 10.23 |
| PGSC0003DMT400035788 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 2.66 | 9.22 |
| CDY54632 | Canola | cytosol | 1.2 | 6.08 |
| CDX82391 | Canola | cytosol | 1.2 | 6.08 |
| CDY54630 | Canola | cytosol | 1.2 | 5.81 |
| CDX87845 | Canola | cytosol, extracellular | 0.8 | 4.48 |
| CDY49965 | Canola | mitochondrion | 0.8 | 1.78 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:35.1 | GO:A0A078GW48 | UniProt:A0A078GW48 | EnsemblPlants:CDY30695 | ProteinID:CDY30695 |
| ProteinID:CDY30695.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00046028001 |
| InterPro:Homeobox-like_sf | InterPro:Myb_dom_plants | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF19 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 |
| UniParc:UPI0004EEA1C0 | SEG:seg | : | : | : | : |
Description
BnaA02g33170DBnaA02g33170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GW48]
Coordinates
chrLK032258:-:58690..64443
Molecular Weight (calculated)
81082.9 Da
IEP (calculated)
8.483
GRAVY (calculated)
-0.726
Length
753 amino acids
Sequence
(BLAST)
(BLAST)
001: MKNEIEQESL SCGAPCFVRK PIKPNDPNNM WKHALDRRIN DGSIQDDTDG SIQDDTDGSE KIQEKTSSSD PCDGDSSSKK TKRVTIKWTS ALENEFFMAI
101: EHIGLHKATP KRILKFMDQK SLTRAHIASK LQKYRRNLKR DEDQRMKDRI AMHSTFSSAD GYINPQHSYN YNTRLGNNNL FNVQPGYGLG QTSFMGNNNA
201: GLHDSLNCMN RRPTYDLSQT GSKLLPMRGN LGFQNGMLPV KEEWRSIPGT SQAPRFGQYG TTSNALGMNY NPTTGTMGSN NYVGIRGDEN GDLVGLGGLR
301: VNGNGNGSFS GARVHGTGSG SLQGMSVYGN GHGSSLGGRG VHGTGNGSLE RMRVPGNGHG TGNGSLGGIR VHGTGNGSLE RIRVPGNGHV TGNGHGTGNG
401: SLGGIRIHGN NNGIRIHDTS NGYGSFGGVK VHGTGNSNFS PDGIIVHGNS NSNDSLGGIR VHGTDSVGGI RVHGTDAGSV VGGNVHGTSN GNGSLGVNFG
501: MNCNFNNNNM SNHGSSTPMF PSELSSFFGN KDQSQNNLIA QTGGVIPALE KPKMFSDHHD INEVFSDTNN SQFHQNQQHQ GNLAGVNVGM NWNFNNNNMS
601: NYGSSTPTFP SALSSSLGNK DQSQNNLIAQ TGGHQGNLAG VNVGMNWNFN NNDMSNHGSS TPMFPSELSS FFGNKDQSQN NLIAQTGGVI PALEKPKMFS
701: DHHDINEVFS DTNNSQFHQN QIVLSWTVSH LNCRCYKLQH HHIYYLVWQL INI
101: EHIGLHKATP KRILKFMDQK SLTRAHIASK LQKYRRNLKR DEDQRMKDRI AMHSTFSSAD GYINPQHSYN YNTRLGNNNL FNVQPGYGLG QTSFMGNNNA
201: GLHDSLNCMN RRPTYDLSQT GSKLLPMRGN LGFQNGMLPV KEEWRSIPGT SQAPRFGQYG TTSNALGMNY NPTTGTMGSN NYVGIRGDEN GDLVGLGGLR
301: VNGNGNGSFS GARVHGTGSG SLQGMSVYGN GHGSSLGGRG VHGTGNGSLE RMRVPGNGHG TGNGSLGGIR VHGTGNGSLE RIRVPGNGHV TGNGHGTGNG
401: SLGGIRIHGN NNGIRIHDTS NGYGSFGGVK VHGTGNSNFS PDGIIVHGNS NSNDSLGGIR VHGTDSVGGI RVHGTDAGSV VGGNVHGTSN GNGSLGVNFG
501: MNCNFNNNNM SNHGSSTPMF PSELSSFFGN KDQSQNNLIA QTGGVIPALE KPKMFSDHHD INEVFSDTNN SQFHQNQQHQ GNLAGVNVGM NWNFNNNNMS
601: NYGSSTPTFP SALSSSLGNK DQSQNNLIAQ TGGHQGNLAG VNVGMNWNFN NNDMSNHGSS TPMFPSELSS FFGNKDQSQN NLIAQTGGVI PALEKPKMFS
701: DHHDINEVFS DTNNSQFHQN QIVLSWTVSH LNCRCYKLQH HHIYYLVWQL INI
001: MASAQSFYNQ SSVLKINVMV VDDDHVFLDI MSRMLQHSKY RVIAVDDPKK ALSTLKIQRD NIDLIITDYY MPGMNGLQLK KQITQEFGNL PVLVMSSDTN
101: KEEESLSCGA MGFIPKPIHP TDLTKIYQFA LSNKRNGKST LSTEQNHKDA DVSVPQQITL VPEQADVLKT KRKNCSFKSD SRTVNSTNGS CVSTDGSRKN
201: RKRKPNGGPS DDGESMSQPA KKKKIQWTDS LHDLFLQAIR HIGLDKAVPK KILAFMSVPY LTRENVASHL QKYRIFLRRV AEQGLYSMLS DRGIDSMFRQ
301: THIKEPYFNY YTPSTSWYDT RLNNRSFYSK PVHGFGQSKL LSTTREPVCF NQMPYNYMNR SSTYEPHRIG SGSNLTLPIQ SNLSFPNQPS QNEERRSFFE
401: PPVMANKIAQ TSQVLGFGQL GPSAISGHNF NNNMTSRYGS LIPSQPGPSH FSYGMQSFLN NENVTYNPQP PANATTQPNL DELPQLENLN LYNDFGNTSE
501: LPYNISNFQF DDNKHQQGEA DPTKFELPAA KFSTELNHED DGDWTFVNIN QGQSNGETSN TIASPETNTP ILNINHNQNQ GQDVPEFNDW SFLDPQELVD
601: DDFMNSLFNN DMN
101: KEEESLSCGA MGFIPKPIHP TDLTKIYQFA LSNKRNGKST LSTEQNHKDA DVSVPQQITL VPEQADVLKT KRKNCSFKSD SRTVNSTNGS CVSTDGSRKN
201: RKRKPNGGPS DDGESMSQPA KKKKIQWTDS LHDLFLQAIR HIGLDKAVPK KILAFMSVPY LTRENVASHL QKYRIFLRRV AEQGLYSMLS DRGIDSMFRQ
301: THIKEPYFNY YTPSTSWYDT RLNNRSFYSK PVHGFGQSKL LSTTREPVCF NQMPYNYMNR SSTYEPHRIG SGSNLTLPIQ SNLSFPNQPS QNEERRSFFE
401: PPVMANKIAQ TSQVLGFGQL GPSAISGHNF NNNMTSRYGS LIPSQPGPSH FSYGMQSFLN NENVTYNPQP PANATTQPNL DELPQLENLN LYNDFGNTSE
501: LPYNISNFQF DDNKHQQGEA DPTKFELPAA KFSTELNHED DGDWTFVNIN QGQSNGETSN TIASPETNTP ILNINHNQNQ GQDVPEFNDW SFLDPQELVD
601: DDFMNSLFNN DMN
Arabidopsis Description
ARR21response regulator 21 [Source:TAIR;Acc:AT5G07210]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.